scholarly journals Proteomic dataset of the sea urchin Paracentrotus lividus adhesive organs and secreted adhesive

Data in Brief ◽  
2016 ◽  
Vol 7 ◽  
pp. 1497-1505 ◽  
Author(s):  
Nicolas Lebesgue ◽  
Gonçalo da Costa ◽  
Raquel Mesquita Ribeiro ◽  
Cristina Ribeiro-Silva ◽  
Gabriel G. Martins ◽  
...  
2021 ◽  
Vol 8 ◽  
Author(s):  
Lisa Gaspar ◽  
Patrick Flammang ◽  
Ricardo José ◽  
Ricardo Luis ◽  
Patrício Ramalhosa ◽  
...  

Sea urchins possess specialized adhesive organs, tube feet. Although initially believed to function as suckers, it is currently accepted that they rely on adhesive and de-adhesive secretions to attach and detach repeatedly from the substrate. Given the biotechnological potential of their strong reversible adhesive, sea urchins are under investigation to identify the protein and glycan molecules responsible for its surface coupling, cohesion and polymerization properties. However, this characterization has only focused on a single species, Paracentrotus lividus. To provide a broader insight into sea urchins adhesion, a comparative study was performed using four species belonging to different taxa and habitats: Diadema africanum, Arbacia lixula, Paracentrotus lividus and Sphaerechinus granularis. Their tube feet external morphology and histology was studied, together with the ultrastructure of their adhesive secretory granules. In addition, one antibody and five lectins were used on tube foot histological sections and extracts, and on adhesive footprints to detect the presence of adhesion-related (glyco)proteins like those present in P. lividus in other species. Results confirmed that the antibody raised against P. lividus Nectin labels the adhesive organs and footprints in all species. This result was further confirmed by a bioinformatic analysis of Nectin-like sequences in ten additional species, increasing the comparison to seven families and three orders. The five tested lectins (GSL II, WGA, STL, LEL, and SBA) demonstrated that there is high interspecific variability of the glycans involved in sea urchin adhesion. However, there seems to be more conservation among taxonomically closer species, like P. lividus and S. granularis. In these species, lectin histochemistry and lectin blots indicated the presence of high molecular weight putative adhesive glycoproteins bearing N-acetylglucosamine residues in the form of chitobiose in the adhesive epidermis and footprints. Our results emphasize a high selective pressure for conservation of functional domains in large putative cohesive proteins and highlight the importance of glycosylation in sea urchin adhesion with indications of taxonomy-related conservation of the conjugated glycans.


2020 ◽  
Vol 167 (9) ◽  
Author(s):  
Mariana Simão ◽  
Mariana Moço ◽  
Luís Marques ◽  
Romana Santos

Abstract Sea urchins have hundreds of specialized adhesive organs, the tube feet, which play a key role in locomotion, substrate attachment and food capture. Tube feet are composed by two functional units: a proximal cylindrical stem that is mobile and flexible, attached to a distal flattened disc that produces adhesive secretions. Oral tube feet discs possess a specialized duo-glandular epidermis that produces adhesive and de-adhesive secretions, enabling strong but reversible adhesion to the substrate. Due to the growing interest in biomimetic adhesives, several studies have been carried out to characterize sea urchin adhesives, and up to date, it has been shown that it is composed by proteins and glycans. The protein fraction has been the subject of several studies, that pin-pointed several adhesion-related candidates. Contrastingly, little is known about the glycans that compose sea urchin adhesives. This study aims at contributing to this topic by focusing on the characterization of the glycosidic fraction of the adhesive secreted by the sea urchin Paracentrotus lividus (Lamarck, 1816), using a battery of 22 lectins, applied to 3 complementary techniques. Our results show that five lectins label exclusively the disc adhesive epidermis and simultaneously the secreted adhesive, being, therefore, most likely relevant for sea urchin adhesion. In addition, it was possible to determine that the glycosidic fraction of the adhesive is composed by a high molecular weight glycoprotein containing N-acetylglucosamine oligomers.


2020 ◽  
Vol 8 (9) ◽  
pp. 661
Author(s):  
Davide Asnicar ◽  
Costanza Cappelli ◽  
Ahmad Safuan Sallehuddin ◽  
Nur Atiqah Maznan ◽  
Maria Gabriella Marin

Despite the widespread use of herbicide glyphosate in cultivation, its extensive runoff into rivers and to coastal areas, and the persistence of this chemical and its main degradation product (aminomethylphosphonic acid, AMPA) in the environment, there is still little information on the potential negative effects of glyphosate, its commercial formulation Roundup® and AMPA on marine species. This study was conducted with the aim of providing a comparative evaluation of the effects of glyphosate-based and its derived chemicals on the larval development of the sea urchin Paracentrotus lividus, thus providing new data to describe the potential ecotoxicity of these contaminants. In particular, the effects on larval development, growth and metabolism were assessed during 48 h of exposure from the time of egg fertilization. The results confirm that AMPA and its parent compound, glyphosate have similar toxicity, as observed in other marine invertebrates. However, interestingly, the Roundup® formulation seemed to be less toxic than the glyphosate alone.


Author(s):  
F. Sellem ◽  
B. Bouhaouala-Zahar

AbstractThe present study was conducted to provide biometric data of the edible sea urchin Paracentrotus lividus along the Tunisian coastline where thirteen marine localities were selected randomly. A total of 653 individuals were collected and their metric and weight measurements were recorded. The size distribution of the different samples was determined and relative growth expressions were deduced. Data analysis showed that all localities’ samples of the wild population were dominated by one-size class, except Port Prince and Haouaria. Interestingly, only diameter-height relationships (D-H) were different between the geographical localities. Diameter-weight relationships (D-TW and D-TWTE) revealed a significant negative growth for all the localities, with the exception of Gammarth which showed positive growth for total weight (D-TW). Moreover, the multivariable analysis revealed divergences and/or similarities between metric and weight variables. Altogether, data highlights the inter-population discrimination with respect to geographic localization and clear segregation between the northern and the eastern localities demonstrated the plasticity of the species.


2010 ◽  
Vol 157 (6) ◽  
pp. 1293-1300 ◽  
Author(s):  
Julie Hermans ◽  
Catherine Borremans ◽  
Philippe Willenz ◽  
Luc André ◽  
Philippe Dubois

2007 ◽  
Vol 33 (2) ◽  
pp. 84-91 ◽  
Author(s):  
A. Meziti ◽  
K. Ar. Kormas ◽  
M. -A. Pancucci-Papadopoulou ◽  
M. Thessalou-Legaki

PLoS ONE ◽  
2012 ◽  
Vol 7 (4) ◽  
pp. e35170 ◽  
Author(s):  
Patricia Prado ◽  
Fiona Tomas ◽  
Stefania Pinna ◽  
Simone Farina ◽  
Guillem Roca ◽  
...  

2004 ◽  
Vol 13 (11) ◽  
pp. 3317-3328 ◽  
Author(s):  
SANDRA DURAN ◽  
CRUZ PALACÍN ◽  
MIKEL A. BECERRO ◽  
XAVIER TURON ◽  
GONZALO GIRIBET

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