scholarly journals Dataset on insightful bio-evaluation of 2-(quinoline-4-yloxy)acetamide analogues as potential anti-Mycobacterium tuberculosis catalase-peroxidase agents via in silico mechanisms

Data in Brief ◽  
2021 ◽  
Vol 38 ◽  
pp. 107441
Author(s):  
Abel Kolawole Oyebamiji ◽  
Olubunmi Modupe Josiah ◽  
Sunday Adewale Akintelu ◽  
Moriam Dasola Adeoye ◽  
Babatunde Olasupo Sabitu ◽  
...  
Structure ◽  
2021 ◽  
Author(s):  
Asma Munir ◽  
Michael T. Wilson ◽  
Steven W. Hardwick ◽  
Dimitri Y. Chirgadze ◽  
Jonathan A.R. Worrall ◽  
...  

Author(s):  
Fostino R. B. Bokosi ◽  
Richard M. Beteck ◽  
Audrey Jordaan ◽  
Ronnet Seldon ◽  
Digby F. Warner ◽  
...  

2018 ◽  
Vol 15 ◽  
pp. 111-120 ◽  
Author(s):  
Ameeruddin Nusrath Unissa ◽  
George Priya Doss C ◽  
Thirumal Kumar ◽  
Swathi Sukumar ◽  
Appisetty Ramya Lakshmi ◽  
...  

2020 ◽  
Author(s):  
Abu Saim Mohammad Saikat

The human pathogen <i>Mycobacterium tuberculosis</i> ( MTB) is indeed one of the renowned important longtime infectious diseases that cause tuberculosis (TB). Interestingly, MTB infection has become one of the world's leading causes of human death. In trehalose synthase, the protein NCGM 946K2 146 found in MTB has an important role. For carbohydrate transport and metabolism, trehalose synthase is required. The protein is not clarified yet, however. In this research, an <i>in silico</i> approach was therefore formulated for functional and structural documentation of the uncharacterized protein NCGM946K2 146. Three different servers, including the Modeller, the Phyre2, and the Swiss Model, were used to evaluate the predicted tertiary structure. The top materials are selected using structural evaluations conducted with the analysis of Ramachandran Plot, Swiss-Model Interactive Workplace, Prosa-web, Verify 3D, and Z scores. This analysis aimed to uncover the value of the NCGM946K2 146 protein of MTB. This research will, therefore, improve our pathogenesis awareness and give us a chance to target the protein compound.


2000 ◽  
Vol 38 (2) ◽  
pp. 669-676 ◽  
Author(s):  
Hanna Soini ◽  
Xi Pan ◽  
Amol Amin ◽  
Edward A. Graviss ◽  
Anees Siddiqui ◽  
...  

Mycobacterium tuberculosis isolates (n= 1,429) from 1,283 patients collected as part of an ongoing population-based tuberculosis epidemiology study in Houston, Texas, were analyzed by spoligotyping and IS6110 profiling. The isolates were also assigned to one of three major genetic groups on the basis of nucleotide polymorphisms located at codons 463 and 95 in the genes (katG and gyrA) encoding catalase-peroxidase and the A subunit of DNA gyrase, respectively. A total of 225 spoligotypes were identified in the 1,429 isolates. There were 54 spoligotypes identified among 713 isolates (n= 623 patients) assigned to 73 IS6110 clusters. In addition, among 716 isolates (n = 660 patients) with unique IS6110 profiles, 200 spoligotypes were identified. No changes were observed either in the IS6110 profile or in the spoligotype for the 281 isolates collected sequentially from 133 patients. Five instances in which isolates with slightly different spoligotypes had the same IS6110 profile were identified, suggesting that in rare cases isolates with different spoligotypes can be clonally related. Spoligotypes correlated extremely well with major genetic group designations. Only three very similar spoligotypes were shared by isolates from genetic groups 2 and 3, and none was shared by group 1 and group 2 organisms or by group 1 and group 3 organisms. All organisms belonging to genetic groups 2 and 3 failed to hybridize with spacer probes 33 to 36. Taken together, the results support the existence of three distinct genetic groups of M. tuberculosis organisms and provide new information about the relationship between IS6110 profiles, spoligotypes, and major genetic groups of M. tuberculosis.


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