Diverse harmful microalgal community assemblages in the Johor Strait and the environmental effects on its community dynamics

Harmful Algae ◽  
2021 ◽  
Vol 107 ◽  
pp. 102077
Author(s):  
Kieng Soon Hii ◽  
Monaliza Mohd-Din ◽  
Zhaohe Luo ◽  
Suh Nih Tan ◽  
Zhen Fei Lim ◽  
...  
2014 ◽  
Vol 36 (5) ◽  
pp. 411 ◽  
Author(s):  
Steven M. Ostoja ◽  
Matthew L. Brooks ◽  
Peggy E. Moore ◽  
Eric L. Berlow ◽  
Robert Blank ◽  
...  

Pack and saddle stock, including, but not limited to domesticated horses, mules, and burros, are used to support commercial, private and administrative activities in the Sierra Nevada. The use of pack stock has become a contentious and litigious issue for land management agencies in the region inter alia due to concerns over effects on the environment. The potential environmental effects of pack stock on Sierra Nevada meadow ecosystems are reviewed and it is concluded that the use of pack stock has the potential to influence the following: (1) water nutrient dynamics, sedimentation, temperature, and microbial pathogen content; (2) soil chemistry, nutrient cycling, soil compaction and hydrology; (3) plant individuals, populations and community dynamics, non-native invasive species, and encroachment of woody species; and (4) wildlife individuals, populations and communities. It is considered from currently available information that management objectives of pack stock should include the following: minimise bare ground, maximise plant cover, maintain species composition of native plants, minimise trampling, especially on wet soils and stream banks, and minimise direct urination and defecation by pack stock into water. However, incomplete documentation of patterns of pack stock use and limited past research limits current understanding of the effects of pack stock, especially their effects on water, soils and wildlife. To improve management of pack stock in this region, research is needed on linking measurable monitoring variables (e.g. plant cover) with environmental relevancy (e.g. soil erosion processes, wildlife habitat use), and identifying specific environmental thresholds of degradation along gradients of pack stock use in Sierra Nevada meadows.


2019 ◽  
Author(s):  
Hideyuki Doi ◽  
Ryutei Inui ◽  
Shunsuke Matsuoka ◽  
Yoshihisa Akamatsu ◽  
Masuji Goto ◽  
...  

AbstractInformation on alpha (local), beta (between habitats), and gamma (regional) diversity is fundamental to understanding biodiversity as well as the function and stability of community dynamics. The methods like environmental DNA (eDNA) metabarcoding are currently considered useful to investigate biodiversity.We compared the performance of eDNA metabarcoding with visual and capture surveys in estimating alpha/gamma diversity and the variation of the community assemblages of river fish communities, particularly considering community nestedness and turnover.In five rivers across west Japan, with comparing to visual/capture surveys, eDNA metabarcoding detected more species in the study sites, consequently the overall number of species in the region (i.e., gamma diversity) was higher. In particular, the species found by visual/capture surveys were encompassed by those by eDNA metabarcoding.With analyzing the community assemblages between the rivers, we showed the different results between the both methods. While, in the same river, the nestedness and species turnover changing from upstream to downstream did not significantly differ between the both methods. Our results suggest that eDNA metabarcoding may be suitable method, especially for understanding regional community patterns, for fish monitoring in rivers.


Author(s):  
N.J. Tao ◽  
J.A. DeRose ◽  
P.I. Oden ◽  
S.M. Lindsay

Clemmer and Beebe have pointed out that surface structures on graphite substrates can be misinterpreted as biopolymer images in STM experiments. We have been using electrochemical methods to react DNA fragments onto gold electrodes for STM and AFM imaging. The adsorbates produced in this way are only homogeneous in special circumstances. Searching an inhomogeneous substrate for ‘desired’ images limits the value of the data. Here, we report on a reversible method for imaging adsorbates. The molecules can be lifted onto and off the substrate during imaging. This leaves no doubt about the validity or statistical significance of the images. Furthermore, environmental effects (such as changes in electrolyte or surface charge) can be investigated easily.


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