KIR gene content diversity and haplotype analysis in Chinese Han population in Shanghai area

2003 ◽  
Vol 64 (10) ◽  
pp. S167 ◽  
Author(s):  
Lei Zhang ◽  
Katharine C. Hsu ◽  
Xiao-Rong Liu ◽  
Bo Dupont ◽  
Lian Fan
2004 ◽  
Vol 145 (1) ◽  
pp. 47-55 ◽  
Author(s):  
H.L. Dai ◽  
X.D. Wang ◽  
Y.B. Li ◽  
J. Wu ◽  
J. Zhang ◽  
...  

2015 ◽  
Vol 2015 ◽  
pp. 1-7
Author(s):  
Yu-Xia Yun ◽  
Li-Ping Dai ◽  
Peng Wang ◽  
Kai-Juan Wang ◽  
Jian-Ying Zhang ◽  
...  

Objectives. To investigate the association between three single nucleotide polymorphisms (SNPs) in the X-ray repair cross complementing 1 gene (XRCC1) and the risk of esophageal squamous cell carcinoma (ESCC) in Chinese population.Methods. A case-control study including 381 primary ESCC patients recruited from hospital and 432 normal controls matched with patients by age and gender from Chinese Han population was conducted. The genotypes of threeXRCC1polymorphisms at −77T>C (T-77C), codon 194 (Arg194Trp), and codon 399 (Arg399Gln) were studied by means of polymerase chain reaction-restriction fragment length polymorphism techniques (PCR-RFLP). Unconditional logistic regression model and haplotype analysis were used to estimate associations of these three SNPs inXRCC1gene with ESCC risk.Results. Polymorphisms at these three sites inXRCC1gene were not found to be associated with risk for developing ESCC; however the haplotypeCcodon 194Gcodon 399C-77T>Cwas significantly associated with reduced risk of ESCC (OR: 0.62, 95% CI: 0.40–0.96) upon haplotype analysis.Conclusion. These results suggested that the gene-gene interactions might play vital roles in the progression on esophageal cancer in Chinese Han population and it would be necessary to confirm these findings in a large and multiethnic population.


2010 ◽  
Vol 28 (6) ◽  
pp. 435-439 ◽  
Author(s):  
Zeng Jie ◽  
Kong Hong ◽  
Tao Jianhong ◽  
Cheng Biao ◽  
Zhou Yongmei ◽  
...  

2003 ◽  
Vol 64 (10) ◽  
pp. S169
Author(s):  
Lei Zhang ◽  
Jueqin Yang ◽  
Fangjuan Yao ◽  
Lingdi Xu ◽  
Lian Fan

2020 ◽  
Vol 134 (6) ◽  
pp. 2063-2065
Author(s):  
Chi-Zao Wang ◽  
Jia-Shuo Zhang ◽  
Xue-Bo Li ◽  
Ru-Feng Bai ◽  
Mei-Sen Shi ◽  
...  

2020 ◽  
Vol 2020 ◽  
pp. 1-11
Author(s):  
Aiping Chen ◽  
Huifang Zhao ◽  
Jingli Wang ◽  
Ru Zhang ◽  
Jingjing Liu ◽  
...  

Unbalanced inflammatory reactions and oxidative stress are inseparably interconnected, and both may play crucial roles in the pathophysiological mechanisms of preeclampsia (PE). In the published previous studies, we have genotyped for SNPs that related to inflammation (rs2227485, rs153109, rs17855750, rs2027432, rs2275913, rs763780, rs4819554, and rs13015714) and oxidative stress (rs1695, rs4680, rs1800566, rs4807542, rs713041, rs7579, rs230813, rs1004467, rs3824755, and rs9932581) to investigate whether these polymorphisms were associated with susceptibility to PE in a Chinese Han population. In this present study, we collected these data of experimental and clinical from above studies for haplotype analysis of inflammation-related SNPs in 631 PE patients and 720 normal pregnancy and oxidative stress-related SNPs in 342 PE patients and 457 normal pregnancies for susceptibility to PE. The data of genotype distribution and allele frequency comparisons after correction for multiple comparisons (P/8 or P/10) showed 2 among the 8 candidate inflammation-related SNPs have significant differences (rs2027432 genotype χ2=407.377,p<0.001,p<0.00625). Moreover, the minor alleles of rs2027432 T (minor allele χ2=450.923,p<0.001,p<0.00625;OR=21.439,95%CI=15.181‐30.278) and rs4819554 G (minor allele χ2=163.465,p<0.001,p<0.00625;OR=5.814,95%CI=4.380‐7.719) were confirmed as risk allele of PE, respectively. Our analysis revealed rs2027432 (TT) of NLRP3 and rs4819554 (GG) of IL-17RA are risk factors for PE. However, no significant difference was found at the oxidative stress-related SNPs. In the candidate loci for oxidative stress, we also identified 3 SNP matches (rs4807542 and rs713041, rs230813 and rs75799, rs1004467 and rs3824755) that had high linkage disequilibrium (LD) with each other and were selected as a block (r2=0.98,r2=0.97,r2=0.97,r2>0.9), and the GT and GC haplotypes of rs4807542 and rs713041 in GPX4 showed significant differences between the PE and control groups (χ2=5.143,p=0.0233,p<0.05;χ2=6.373,p=0.0116,p<0.05). So, we inferred that polymorphisms of NLRP3 rs2027432 and IL-17RA rs4819554, which are related to inflammation, and the rs713041 variant of GPX4, which is related to oxidative stress, were associated with susceptibility to PE. The GT and GC haplotypes of rs4807542 and rs713041 in GPX4 may increase the risk of PE in the Chinese Han population.


2020 ◽  
Author(s):  
Jiamin Wu ◽  
Xiang Wang ◽  
Yao Sun ◽  
Zichao Xiong ◽  
Fanglin Niu ◽  
...  

Abstract Background: Lung cancer is the leading cause of cancer-related mortality worldwide and CMTM8 is a potential tumor suppressor gene, which is down-regulated in lung cancer. The objective of this research was to assess the association of CMTM8 genetic polymorphisms with lung cancer risk in Chinese Han population. Methods: To evaluate the correlation between CMTM8 polymorphisms and lung cancer risk, Agena MassArray platform was used for genotype determination among 509 lung cancer patients and 506 controls. Multiple genetic models, stratification analysis and haplotype analysis were used by calculating odds ratio (OR) and 95% confidence intervals (CIs). Results: Significant associations were detected between CMTM8 rs6771238 and an increased lung cancer risk ( p < 0.05). In stratified analysis, rs6771238 was related to an increased risk of lung squamous cell carcinoma ( p < 0.05), rs6771238 was associated with an increased risk of lung adenocarcinoma ( p < 0.05), rs9835916 and rs1077868 were correlated with lung cancer staging ( p < 0.05), and rs9835916 was correlated with an increased risk of lymph node metastasis in lung cancer patients ( p < 0.05). Additionally, Haplotype analysis illuminated that haplotypes GG and AG were closely correlated with lung cancer staging, and haplotype AG was correlated with an increased lung cancer risk among individuals older than 50 years ( p < 0.05). Conclusions: Our study firstly reported that the CMTM8 polymorphisms were risk factors for lung cancer in Chinese Han population. These findings also suggested the potential roles of CMTM8 in the development of lung cancer.


2019 ◽  
Vol 40 ◽  
pp. e271-e273
Author(s):  
Lipeng Pan ◽  
Hongbin Liu ◽  
Danlu Song ◽  
Haiying Jin ◽  
Bingjie Zheng ◽  
...  

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