Draft genome sequence of Hydrogenovibrio marinus MH-110, a model organism for aerobic H2 metabolism

2014 ◽  
Vol 185 ◽  
pp. 37-38 ◽  
Author(s):  
Byung Hoon Jo ◽  
Byeong Hee Hwang ◽  
Hyung Joon Cha
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Model Organism ◽  
Draft Genome Sequence ◽  
H2 Metabolism

Draft genome sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis

2013 ◽  
Vol 168 (4) ◽  
pp. 731-733 ◽  
Author(s):  
Daniel Wibberg ◽  
Jochen Blom ◽  
Christian Rückert ◽  
Anika Winkler ◽  
Andreas Albersmeier ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Sinorhizobium Meliloti ◽  
Draft Genome ◽  
Model Organism ◽  
Draft Genome Sequence

scholarly journals Draft Genome Sequence ofAcinetobacter johnsoniiMB44, Exhibiting Nematicidal Activity againstCaenorhabditis elegans

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Shijing Tian ◽  
Muhammad Ali ◽  
Li Xie ◽  
Lin Li
Keyword(s):  
Caenorhabditis Elegans ◽  
Molecular Mechanism ◽  
Genome Sequence ◽  
Plant Tissue ◽  
Tissue Sample ◽  
Draft Genome ◽  
Model Organism ◽  
Nematicidal Activity ◽  
Draft Genome Sequence ◽  
Acinetobacter Johnsonii

Acinetobacter johnsoniiMB44 was isolated from a frost-plant-tissue sample, which showed noteworthy nematicidal activity against the model organismCaenorhabditis elegans. Here, we report the 3.4 Mb draft genome ofA. johnsoniiMB44, which will help in understanding the molecular mechanism of its ability to infect nematodes.

scholarly journals Draft Genome Sequence of Myxococcus xanthus Wild-Type Strain DZ2, a Model Organism for Predation and Development

2013 ◽  
Vol 1 (3) ◽  
Author(s):  
S. Muller ◽  
J. W. Willett ◽  
S. M. Bahr ◽  
C. L. Darnell ◽  
K. R. Hummels ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Wild Type Strain ◽  
Myxococcus Xanthus ◽  
Draft Genome ◽  
Model Organism ◽  
Draft Genome Sequence ◽  
Wild Type

scholarly journals Draft Genome Sequence of Serratia proteamaculans MFPA44A14-05, a Model Organism for the Study of Meat and Seafood Spoilage

2017 ◽  
Vol 5 (23) ◽  
Author(s):  
Lysiane Fougy ◽  
Gwendoline Coeuret ◽  
Marie-Christine Champomier-Vergès ◽  
Stéphane Chaillou
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Model Organism ◽  
Draft Genome Sequence ◽  
Modified Atmosphere ◽  
Content Type ◽  
Serratia Proteamaculans

ABSTRACT In this study, we present a draft genome sequence of Serratia proteamaculans MFPA44A14-05. This strain was isolated from a spoiled organic modified-atmosphere-packed beef carpaccio. The draft genome sequence will contribute to the understanding of the role of the S. proteamaculans species in meat and seafood spoilage.

scholarly journals Draft Genome Sequence of Donghicola sp. Strain KarMa, a Model Organism for Monomethylamine-Degrading Nonmethylotrophic Bacteria

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Karsten Zecher ◽  
Marcel Suleiman ◽  
Daniel Wibberg ◽  
Anika Winkler ◽  
Bodo Philipp ◽  
...  
Keyword(s):  
Energy Source ◽  
Genome Sequence ◽  
Heterotrophic Bacteria ◽  
Draft Genome ◽  
Model Organism ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Methylamine Dehydrogenase ◽  
Putative Gene

ABSTRACT The C1-compound monomethylamine can serve as a nitrogen, carbon, and energy source for heterotrophic bacteria. The marine alphaproteobacterium Donghicola sp. strain KarMa can use monomethylamine as a source only for nitrogen and not for carbon. Its draft genome sequence is presented here and reveals putative gene clusters for the methylamine dehydrogenase and the N-methylglutamate pathways for monomethylamine metabolism.

scholarly journals Draft Genome Sequence of USA100 Methicillin-Resistant Staphylococcus aureus Strain 209

2018 ◽  
Vol 6 (1) ◽  
Author(s):  
Yingfeng Chen ◽  
Heidi A. Crosby ◽  
Wilhelm F. Oosthuysen ◽  
Daniel J. Diekema ◽  
Scott T. Kelley ◽  
...  
Keyword(s):  
Health Care ◽  
Staphylococcus Aureus ◽  
Genome Sequence ◽  
Methicillin Resistant Staphylococcus Aureus ◽  
Draft Genome ◽  
Model Organism ◽  
Draft Genome Sequence ◽  
Aureus Strain ◽  
Type Ii ◽  
Methicillin Resistant

ABSTRACT USA100 strains are significant contributors to the overall burden of health care-associated methicillin-resistant Staphylococcus aureus (MRSA) infections. Strain 209 is a representative MRSA isolate that serves as a model organism for agr type II studies and USA100 virulence assessments. We present a draft genome sequence of this strain.

scholarly journals Draft Genome Sequence of Tubulinosema ratisbonensis, a Microsporidian Species Infecting the Model Organism Drosophila melanogaster

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Valérie Polonais ◽  
Sebastian Niehus ◽  
Ivan Wawrzyniak ◽  
Adrien Franchet ◽  
Christine Gaspin ◽  
...  
Keyword(s):  
Drosophila Melanogaster ◽  
Genome Sequence ◽  
Genetic Model ◽  
Draft Genome ◽  
Model Organism ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Protein Encoding ◽  
Host Parasite ◽  
Encoding Genes

We present the draft genome sequence of Tubulinosema ratisbonensis, a microsporidium species infecting Drosophila melanogaster. A total of 3,013 protein-encoding genes and an array of transposable elements were identified. This work represents a necessary step to develop a novel model of host-parasite relationships using the highly tractable genetic model D. melanogaster.

scholarly journals Draft Genome Sequence of Trebouxiophyceae sp. Strain KSI-1, Isolated from an Island Hot Spring

2018 ◽  
Vol 7 (16) ◽  
Author(s):  
Hiro Takahashi ◽  
Satoshi Tanaka ◽  
Shuhei Hayashi ◽  
Shido Miyaki ◽  
Anna Takahashi ◽  
...  
Keyword(s):  
Oxidative Stress ◽  
Green Alga ◽  
Genome Sequence ◽  
Hot Spring ◽  
Draft Genome ◽  
Draft Genome Sequence

Trebouxiophyceae sp. KSI-1 is a green alga isolated from a seashore hot spring on Satsuma Iōjima in Kagoshima, Japan, and is highly tolerant to oxidative stress.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

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