Immunoinformatics analysis of antigenic epitopes and designing of a multi-epitope peptide vaccine from putative nitro-reductases of M. tuberculosis DosR

2021 ◽  
pp. 105017
Author(s):  
Mohd. Shiraz ◽  
Surabhi Lata ◽  
Pankaj Kumar ◽  
Umate Nachiket Shankar ◽  
Mohd. Akif
2022 ◽  
Vol 12 ◽  
Author(s):  
Hongqiang Lou ◽  
Xusheng Li ◽  
Xiusheng Sheng ◽  
Shuiqin Fang ◽  
Shaoye Wan ◽  
...  

Campylobacter jejuni (C. jejuni) is one of the major pathogens contributing to the enteritis in humans. Infection can lead to numerous complications, including but not limited to Guillain-Barre syndrome, reactive arthritis, and Reiter’s syndrome. Over the past two decades, joint efforts have been made toward developing a proper strategy of limiting the transmission of C. jejuni to humans. Nevertheless, except for biosecurity measures, no available vaccine has been developed so far. Judging from the research findings, Omp18, AhpC outer membrane protein, and FlgH flagellin subunits of C. jejuni could be adopted as surface protein antigens of C. jejuni for screening dominant epitope thanks to their strong antigenicity, expression of varying strains, and conservative sequence. In this study, bioinformatics technology was adopted to analyze the T-B antigenic epitopes of Omp18, AhpC, and FlgH in C. jejuni strain NCTC11168. Both ELISA and Western Blot methods were adopted to screen the dominant T-B combined epitope. GGS (GGCGGTAGC) sequence was adopted to connect the dominant T-B combined epitope peptides and to construct the prokaryotic expression system of tandem repeats of antigenic epitope peptides. The mouse infection model was adopted to assess the immunoprotective effect imposed by the trivalent T-B combined with antigen epitope peptide based on Omp18/AhpC/FlgH. In this study, a tandem epitope AhpC-2/Omp18-1/FlgH-1 was developed, which was composed of three epitopes and could effectively enhance the stability and antigenicity of the epitope while preserving its structure. The immunization of BALB/c mice with a tandem epitope could induce protective immunity accompanied by the generation of IgG2a antibody response through the in vitro synthesis of IFN-γ cytokines. Judging from the results of immune protection experiments, the colonization of C. jejuni declined to a significant extent, and it was expected that AhpC-2/Omp18-1/FlgH-1 could be adopted as a candidate antigen for genetic engineering vaccine of C. jejuni MAP.


2010 ◽  
Vol 183 (4S) ◽  
Author(s):  
Wataru Obara ◽  
Ryo Takata ◽  
Koji Yoshida ◽  
Takuya Tsunoda ◽  
Akira Togashi ◽  
...  

2009 ◽  
Vol 181 (4S) ◽  
pp. 349-349
Author(s):  
Wataru Obara ◽  
Mitsugu Kanehira ◽  
Ryo Takata ◽  
Takuya Tsunoda ◽  
Koji Yoshida ◽  
...  

2014 ◽  
Vol 349 ◽  
pp. 121-134 ◽  
Author(s):  
Navid Nezafat ◽  
Younes Ghasemi ◽  
Gholamreza Javadi ◽  
Mohammad Javad Khoshnoud ◽  
Eskandar Omidinia

2020 ◽  
Author(s):  
Onyeka S. Chukwudozie ◽  
Clive M. Gray ◽  
Tawakalt A. Fagbayi ◽  
Rebecca C. Chukwuanukwu ◽  
Victor O. Oyebanji ◽  
...  

ABSTRACTDeveloping an efficacious vaccine to SARS-CoV-2 infection is critical to stem COVID-19 fatalities and providing the global community with immune protection. We have used a bioinformatic approach to aid in the design of an epitope peptide-based vaccine against the spike protein of the virus. Five antigenic B cell epitopes with viable antigenicity and a total of 27 discontinuous B cell epitopes were mapped out structurally in the spike protein for antibody recognition. We identified eight CD8+ T cell 9-mers along with 12 CD4+ T cell 14-15-mer as promising candidate epitopes putatively restricted by a large number of MHC-I and II alleles respectively. We used this information to construct an in silico chimeric peptide vaccine whose translational rate was highly expressed when cloned in pET28a (+) vector. The vaccine construct was predicted to elicit high antigenicity and cell-mediated immunity when given as a homologous prime-boost, with triggering of toll-like receptor 5 by the adjuvant linker. The vaccine was characterized by an increase in IgM and IgG and an array of Th1 and Th2 cytokines. Upon in silico challenge with SARS-CoV-2, there was a decrease in antigen levels using our immune simulations. We therefore propose that potential vaccine designs consider this approach.


Vaccine ◽  
2021 ◽  
Vol 39 (42) ◽  
pp. 6221-6237
Author(s):  
Soumya Ranjan Mahapatra ◽  
Jyotirmayee Dey ◽  
Taranjeet Kaur ◽  
Rajlaxmi Sarangi ◽  
Atul Anand Bajoria ◽  
...  

2004 ◽  
Vol 280 (1) ◽  
pp. 54-63 ◽  
Author(s):  
Naveen K. Dakappagari ◽  
Kenneth D. Lute ◽  
Sharad Rawale ◽  
Joan T. Steele ◽  
Stephanie D. Allen ◽  
...  

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