scholarly journals Detection and genetic diversity of Mopeia virus in Mastomys natalensis from different habitats in the Limpopo National Park, Mozambique

2022 ◽  
pp. 105204
Author(s):  
Lourenço Mapaco ◽  
Laurent Crespin ◽  
Dércio Rodrigues ◽  
Joelle Gouy de Bellocq ◽  
Josef Bryja ◽  
...  
Genetica ◽  
2019 ◽  
Vol 147 (3-4) ◽  
pp. 327-335 ◽  
Author(s):  
Yu Zhang ◽  
Yunyun Zhou ◽  
Xuefeng Liu ◽  
Huiliang Yu ◽  
Diqiang Li ◽  
...  

2020 ◽  
Vol 2020 (19) ◽  
pp. 45-53
Author(s):  
Kanstantsin V. Homel ◽  
◽  
K. Śliwińska ◽  
Arseni A. Valnisty ◽  
Mikhail E. Nikiforov ◽  
...  

The paper presents data on the assessment of the genetic diversity of five subpopulations of the European bison (Bison bonasus) in Belarus — from the National Park “Belovezhskaya Pushcha”, the National Park “Pripyatsky”, the Osipovichi district (Mogilev area), SEI “Berezinsky Biosphere Reserve” and the Grodno region. In general, the work includes 30 samples of muscle tissue from the collection of Gene bank of wild fauna in SSPA “SPC NAS of Belarus on Bioresources” (Minsk, Belarus). Microsatellites were used as markers to assess genetic diversity, structure, and search for signs of a sharp decline in the size of bison subpopulations in the past. A total of 11 microsatellite markers were used, recommended by the Food and Agriculture Organization of the United Nations for cattle research. The analysis of B. bonasus subpopulation from the NP “Pripyatsky” showed signs of passing through the genetic bottleneck. All studied subpopulations are characterized by a similarly low genetic diversity level in all analyzed indicators (mean number of alleles, allelic diversity, observed and expected heterozygosity). The expected heterozygosity (He) for the three subpopulations from the NP “Belovezhskaya Pushcha”, the NP “Pripyatsky” and from the Osipovichi district ranged from 0.37 to 0.39. For the studied subpopulations, the values of the fixation index were negative. The assessment of the presence of genetic structuring between the subpopulations of bison from the NP “Belovezhskaya Pushcha”, the NP “Pripyatsky” and from the Osipovichi district based on the values of such indexes as Fst and DJost which showed no signs of genetic differentiation, which is also confirmed by principal coordinates analysis (PCoA). The European bison conservation in Belarus has required tremendous efforts in the past. So far, even though the impressively large population size reached in Belarus, B. bonasus status still should not be considered as stable, which is closely linked to aspects of its overall low genetic diversity. Our research confirmed the low genetic variability of Belarusian subpopulations. Therefore, the more extensive research concentrated on identifying genetic diversity is necessary to ensure the beneficial control of gene flow and register a potential correlation of unfavorable gene variants with possible inbreeding depression. These attempts are required to lay the groundwork for the management and protection of the European bison in Belarus.


2021 ◽  
Vol 67 (No. 9) ◽  
pp. 420-426
Author(s):  
Juraj Paule ◽  
Nani Goginashvili ◽  
Irina Tvauri ◽  
Ladislav Paule ◽  
Ekaterine Gabashvili ◽  
...  

Internal transcribed spacer (ITS) sequence was tested in Acer ibericum for its suitability as a barcoding as well as population genetic marker. The marker was reliably used to identify A. ibericum as well as to gain preliminary insights into the genetic diversity of Georgian populations. MegaBLAST searches of studied samples against the GenBank database revealed that all studied accessions could be considered Acer ibericum. Populations from Vashlovani National Park revealed the presence of unique ribotypes, and together with the population from Shavi Mountain, they were identified as the most genetically diverse ones. Based on presented data the populations from Eastern Georgia should be prioritized if conservation measures are planned.


2021 ◽  
Vol 56 (4) ◽  
pp. 273-278
Author(s):  
Abebayehu Dessalegn ◽  
Mundanthra Balakrishnan ◽  
Till Töpfer ◽  
Lars Podsiadlowski ◽  
Tilaye Wube

2009 ◽  
Vol 87 (7) ◽  
pp. 642-647 ◽  
Author(s):  
Tina M.J. Giroux ◽  
Douglas P. Chivers ◽  
Michael J. Fitzsimmons ◽  
Neil B. Chilton

Genetic diversity of the remnant population of lake trout ( Salvelinus namaycush (Walbaum in Artedi, 1792)) in Crean Lake was compared with that for two other populations in the Prince Albert National Park (PANP) using single-strand conformation polymorphism (SSCP) and DNA sequencing analyses of two mtDNA genes. Although there was no sequence variation among individuals for nad5, six different nad2 haplotypes were detected. The Crean Lake population had the least number of haplotypes and lowest nucleotide variation. Also, one common nad2 haplotype in Crean Lake was not detected in the other populations. The results suggest that introductions of lake trout from Wassegam Lake into Crean Lake were unsuccessful with respect to the establishment and (or) reproduction of the stocked fish. Conservation of the remnant population of lake trout in Crean Lake is important because it is genetically distinct from other populations within PANP and in adjacent areas.


2013 ◽  
Vol 13 (1) ◽  
pp. 67-74 ◽  
Author(s):  
Claudia Teresa Hornung-Leoni ◽  
Victoria Sosa ◽  
June Simpson ◽  
Katia Gil

Puya raimondii, the giant Peruvian and Bolivian terrestrial bromeliad, is an emblematic endemic Andean species well represented in Huascarán National Park in Peru. This park is the largest reserve of puna (high altitude plateau) vegetation. The objective of this study is to report on genetic variation in populations of P. raimondii from Huascarán and neighboring areas. AFLP profiles with four selective primer combinations were retrieved for 60 individuals from different zones. Genetic variability was estimated and a total of 172 bands were detected, of which 79.1% were polymorphic loci. The results showed genetic differentiation among populations, and gene flow. A cluster analysis showed that individuals of P. raimondii populations located in different mountain systems could be grouped together, suggesting long distance dispersal. Thus, conservation strategies for P. raimondii have to take into account exchange between populations located far apart in distance in order to preserve the genetic diversity of this showy species.


2013 ◽  
Vol 27 (1) ◽  
pp. 55-76 ◽  
Author(s):  
Alina Bączkiewicz

Abstract For each of 8 species of leafy liverworts, 9-10 populations were sampled in 2-3 regions of Poland. In total, 5 regions were taken into account: the Tatra National Park, Bieszczady Mts., Białowieża Forest, Pomeranian Lake District, and Suwałki Lake District. Populations of most of the studied species did not show any correlation between genetic differentiation and geographic distances. Clear differences between regional groups of populations were found in only 2 species. The other species showed a complete or partial lack of genetic differentiation between groups of populations from various geographic regions. Generally, however, mountain populations had greater genetic diversity (HT, HS) and coefficient of genetic differentiation (GST) than lowland populations. In the Tatra National Park all the studied liverworts turned out to be more diverse than in the Bieszczady Mts. Białowieża Forest created a uniform group, standing out markedly from mountainous populations but population in this region had slightly smaller genetic diversity, then in the mountains. In the Pomeranian and Suwałki Lake Districts, genetic diversity of liverworts was significantly lower than in mountains. The decrease in diversity in these regions is a likely consequence of habitat fragmentation (causing population depletion) combined with negative effects of urban development. Habitat fragmentation results in genetic drift and inbreeding depression, which cause a decrease in genetic diversity. In the Pomeranian Lake District the level of total diversity (HT) and intra-population diversity (HS) was markedly higher than in the Suwałki Lake District. It may be linked to differences in climate, in the Suwałki Lake District climate is stronger.


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