Effects of biochar on soil microbial community and functional genes of a landfill cover three years after ecological restoration

2020 ◽  
Vol 717 ◽  
pp. 137133 ◽  
Author(s):  
Hang Lu ◽  
Mengxue Yan ◽  
Ming Hung Wong ◽  
Wing Yin Mo ◽  
Yinghui Wang ◽  
...  
Forests ◽  
2019 ◽  
Vol 10 (3) ◽  
pp. 240 ◽  
Author(s):  
Jiaojiao Deng ◽  
Wenxu Zhu ◽  
Yongbin Zhou ◽  
You Yin

Different revegetatiom types can affect the chemical composition of soil organic carbon (SOC), soil microbial community and the functional genes related to carbon cycle. However, the relationships between SOC chemical functional groups and soil microbial communities and the functional genes remains poorly unclear under different revegetation types. Using the solid-state 13C nuclear magnetic resonance (NMR) spectroscopy, we examined changes in the SOC chemical composition of five soils (0–10 cm depth) from Larix gmelinii Rupr. (LG), Pinus koraiensis Sieb. (PK), Quercus mongolica Fisch. (QM), Juglans mandshurica Maxim. (JM), and conifer-broadleaf forest (CB). And the soil microbial community genes related to metabolism of macro-molecular compounds were determined via whole genome shotgun based on Illumina HiSeq. Our results indicated that broadleaf forests (JM, QM) had increased the contents of soil total carbon (C), total nitrogen (N), dissolved organic carbon (DOC), and microbial biomass carbon (MBC), compared with coniferous forests (LG, PK) and the conifer-broadleaf forest (CB). While, the coniferous forests generated a lower O-alcoxyl C, a higher alkyl C, and the ratio of alkyl C/O-alkyl C than broadleaf forests. A total of four kingdoms were identified via whole metagenome shotgun sequencing, including eight archaea, 55 bacteria, 15 eukaryota, and two viruses, giving a total 80 phyla. The contents of alkyne C, phenolic C, methoxyl C, COO/NC=O, and alkyl C were strong related to the composition of soil microbial community and their contents illuminated a major part of the variation in soil microbial composition. We detected seven corresponding macro-molecular compounds of different organic carbon functional group, and 244 genes related to metabolism across all samples, and soil total C, total N, and DOC could be the main factors for microbial functional gene composition. Interestingly, the relative abundances of different SOC chemical functional groups, the phylogenetic distance for microbes, the genes of C cycling based on the KEGG database, and the relative abundance of genes related to metabolism of macro-molecular compounds of different SOC chemical functional groups under different revegetation types all could be divided into three groups, including PK plus LG, JM plus QM, and CB. Our results also illustrated that variations in SOC chemical functional groups were strongly associated with changes of soil microbial community taxa and functional genes, which might be affected by the changes of soil characteristics.


2021 ◽  
Vol 13 (21) ◽  
pp. 11684
Author(s):  
Li Fan ◽  
Weiping Zhao ◽  
Wendan Feng ◽  
Ping Mo ◽  
Yunlin Zhao ◽  
...  

Soil microorganisms play an important role in regulating a variety of ecological functions. In recent years, the research on ecological restoration after mining has made people more aware of the importance of microbial diversity to ecosystem restoration. The present study investigated the effect of ecological restoration on microbial community structure and its relationship with soil physicochemical properties in the Dabaoshan mining area, China. High throughput sequencing technology was used to analyze and compare the microbial community composition of three types of soil (undamaged area, unrestoration area, and ecological restoration area). The contents of organic carbon, total nitrogen, and total phosphorus were 2.38–12.97 g/kg, 0.39–1.62 g/kg, and 0.99–1.51 g/kg, respectively. In different soil states, undamaged area and ecological restoration area were significantly higher than those in unrestoration area. The results showed that the structure of soil microbial community was significantly correlated with soil physicochemical properties, and formations in the repaired and unrepaired soils were different. Operational Taxonomic Unit (OTU) cluster analysis and diversity index analysis showed that soil microbial community changed at phylum and genus levels. The results showed that at the phylum level, all soil samples contained Firmicutes, Proteobacteria, and actinobacteria. Firmicutes and Proteobacteria of the ecological restoration area (ER1, ER2) were the highest in relative abundance compared with other samples, accounting for more than 45%. Proteobacteria and Acidobacteria were the dominant phylum in the undamaged area (UD), accounting for 32.7% and 22.3%, respectively. It can be seen that soil restoration produced a new dominant population, and Proteobacteria showed an absolute competitive advantage in the mining soil.


2021 ◽  
Author(s):  
Yang Gao ◽  
Xiuwei Wang ◽  
Zijun Mao ◽  
Liu Yang ◽  
Zhiyan Jiang ◽  
...  

Abstract Aim Soil microbial community structure and functional genes are critical to the cycling of carbon and nutrients in forest soils. As afforestation practices increasingly promote different functional traits tree species, it becomes critical to understand how they influences soil microbial community structures and functional genes, which directly influence soil biogeochemical processes. Methods We used fungi ITS and bacteria 16S rDNA to investigate soil microbial communities and functional genes in three monoculture plantations consisting of a non-native evergreen conifer (Pinus sibirica), a native deciduous conifer (Larix gmelinii), and a native deciduous angiosperm (Betula platyphylla) to compare with two 1:1 mixed-species plantations (P. sibirica and L. gmelinii, P. sibirica and B. platyphylla).Results The fungal community structure of the conifer-angiosperm mixed plantation was similar to that of the non-native evergreen conifer, and the bacterial community structure was similar to that of the angiosperm monoculture plantation. Fungal communities were strongly related to tree species, but bacteria communities were strongly related to soil nitrogen. Microbial co-occurrence patterns varied according to plantation types and altered soil nutrient cycling. Microbial communities in forest plantations of conifer-angiosperm mixed plantation contribute to soil nitrogen fixation and coniferous mixed plantation contribute to soil carbon fixation. Conclusions Our results provide a comparative study of the soil microbial ecology in afforestation of different functional trains species. This knowledge enhances the understanding of the relative control of soil microbial community structure.


2018 ◽  
Vol 51 (2) ◽  
Author(s):  
Muhammad Razaq ◽  
Muhammad Sajjad Haider ◽  
Salah Uddin ◽  
Liu Chunping ◽  
Hai-Long Shen ◽  
...  

2002 ◽  
Vol 66 (3) ◽  
pp. 826 ◽  
Author(s):  
Søren O. Petersen ◽  
Pamela S. Frohne ◽  
Ann C. Kennedy

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