Enzymatic activities and microbial communities in an Antarctic dry valley soil: Responses to C and N supplementation

2008 ◽  
Vol 40 (9) ◽  
pp. 2130-2136 ◽  
Author(s):  
D.W. Hopkins ◽  
A.D. Sparrow ◽  
L.L. Shillam ◽  
L.C. English ◽  
P.G. Dennis ◽  
...  
2019 ◽  
Vol 19 (5) ◽  
pp. 2153-2165 ◽  
Author(s):  
Ahmed Naylo ◽  
Sofia I. Almeida Pereira ◽  
Leila Benidire ◽  
Hicham El Khalil ◽  
Paula M. L. Castro ◽  
...  

2015 ◽  
Vol 161 ◽  
pp. 366-374 ◽  
Author(s):  
Elisa A. Giustinianovich ◽  
Estrella R. Aspé ◽  
Jack E. Behar ◽  
Víctor L. Campos ◽  
Marlene D. Roeckel

2021 ◽  
Vol 12 ◽  
Author(s):  
Scott F. George ◽  
Noah Fierer ◽  
Joseph S. Levy ◽  
Byron Adams

Ice-free soils in the McMurdo Dry Valleys select for taxa able to cope with challenging environmental conditions, including extreme chemical water activity gradients, freeze-thaw cycling, desiccation, and solar radiation regimes. The low biotic complexity of Dry Valley soils makes them well suited to investigate environmental and spatial influences on bacterial community structure. Water tracks are annually wetted habitats in the cold-arid soils of Antarctica that form briefly each summer with moisture sourced from snow melt, ground ice thaw, and atmospheric deposition via deliquescence and vapor flow into brines. Compared to neighboring arid soils, water tracks are highly saline and relatively moist habitats. They represent a considerable area (∼5–10 km2) of the Dry Valley terrestrial ecosystem, an area that is expected to increase with ongoing climate change. The goal of this study was to determine how variation in the environmental conditions of water tracks influences the composition and diversity of microbial communities. We found significant differences in microbial community composition between on- and off-water track samples, and across two distinct locations. Of the tested environmental variables, soil salinity was the best predictor of community composition, with members of the Bacteroidetes phylum being relatively more abundant at higher salinities and the Actinobacteria phylum showing the opposite pattern. There was also a significant, inverse relationship between salinity and bacterial diversity. Our results suggest water track formation significantly alters dry soil microbial communities, likely influencing subsequent ecosystem functioning. We highlight how Dry Valley water tracks could be a useful model system for understanding the potential habitability of transiently wetted environments found on the surface of Mars.


Viruses ◽  
2019 ◽  
Vol 11 (11) ◽  
pp. 1022 ◽  
Author(s):  
Pacifica Sommers ◽  
Rafaela S. Fontenele ◽  
Tayele Kringen ◽  
Simona Kraberger ◽  
Dorota L. Porazinska ◽  
...  

Antarctic cryoconite holes, or small melt-holes in the surfaces of glaciers, create habitable oases for isolated microbial communities with tightly linked microbial population structures. Viruses may influence the dynamics of polar microbial communities, but the viromes of the Antarctic cryoconite holes have yet to be characterized. We characterize single-stranded DNA (ssDNA) viruses from three cryoconite holes in the Taylor Valley, Antarctica, using metagenomics. Half of the assembled metagenomes cluster with those in the viral family Microviridae (n = 7), and the rest with unclassified circular replication associated protein (Rep)-encoding single-stranded (CRESS) DNA viruses (n = 7). An additional 18 virus-like circular molecules encoding either a Rep, a capsid protein gene, or other unidentified but viral-like open reading frames were identified. The samples from which the genomes were identified show a strong gradient in microbial diversity and abundances, and the number of viral genomes detected in each sample mirror that gradient. Additionally, one of the CRESS genomes assembled here shares ~90% genome-wide pairwise identity with a virus identified from a freshwater pond on the McMurdo Ice Shelf (Antarctica). Otherwise, the similarity of these viruses to those previously identified is relatively low. Together, these patterns are consistent with the presence of a unique regional virome present in fresh water host populations of the McMurdo Dry Valley region.


2020 ◽  
Author(s):  
Christian Ranits ◽  
Lucia Fuchslueger ◽  
Leandro Van Langenhove ◽  
Ivan Janssens ◽  
Josep Peñuelas ◽  
...  

<p>Tropical forest ecosystems are important components of global biogeochemical cycling. Many tropical rainforests grow in old and highly weathered soils, depleted in phosphorus (P) and net primary productivity in tropical forests is often limited by P availability. It is unclear, however, if heterotrophic microbial communities in tropical soils are also limited by P or rather by carbon (C). Elemental limitations of microorganisms in soil have often been approached by measurements of respiration rates in response to additions of nutrients or carbon. However, it has been argued lately, that microbial growth rather than respiration should be used to assess limitations.</p><p>In this study we therefore ask the question whether the growth of heterotrophic microbial communities in tropical soil is limited by available phosphorus or by carbon. We collected soils from three sites along a topographic gradient (plateau, slope, bottom) differing in soil texture, total and available P concentrations from a well-studied, P-poor region in Nouragues, French Guiana. We incubated these soils in the laboratory with C in the form of cellulose, inorganic phosphorus and with a combination of both, and studied microbial growth by measuring the <sup>18</sup>O incorporation from labelled water into microbial DNA. Moreover, we measured microbial respiration and determined microbial biomass C, N (nitrogen) and P.</p><p>Our results demonstrate that, although microbial biomass C and N was similar in soil collected from all three topographic sites, soil respiration rates were significantly higher in soils from the plateau indicating a more active microbial community. Microbial C and N did not respond to cellulose and inorganic P additions, only microbial P increased significantly when P was added in all soils. Although microbial biomass C was not increased, C and P additions stimulated microbial respiration in clay rich plateau soils. In slope soils microbial communities initially only increased respiration activity in response to P additions, however at the end of the incubation also C showed significant differences in respiration activity, with strongest increases when C and P were added in combination. In sandier bottom soils microorganisms responded with increased activity to C addition, but also here respiration showed strongest increases in response to combined carbon and phosphorus additions. We will discuss these findings in relation to the pattern of gross growth rates in these soils and evaluate the stoichiometric limitations of microbial activity and turnover.</p>


Agriculture ◽  
2021 ◽  
Vol 11 (10) ◽  
pp. 909
Author(s):  
Wassila Riah-Anglet ◽  
Elodie Cusset ◽  
Rémi Chaussod ◽  
Stéven Criquet ◽  
Marie-Paule Norini ◽  
...  

The aims of this study were to investigate (i) the influence of aging grassland in the recovery of soil state by the comparison of permanent grassland, two restored grasslands, two temporary grasslands, and a continuous crop in the same pedoclimatic conditions, (ii) the extent and the persistence of the potential changes following a grassland/or cropland phase. We hypothesized that the level of microbial communities and enzyme activities could achieve a profile close to that of permanent grassland after the introduction of grassland for a few years in crop rotations. Soil biophysicochemical properties were studied. Our results indicated that the abundance of microbial communities and enzyme activities were positively correlated to soil C and N contents and negatively correlated to soil pH. The changes in microbial abundance level were strongly linked to the changes in functional level when grasslands are introduced into crop rotations. We also showed that a continuous crop regime had a stronger legacy on the soil biota and functions. By contrast, the legacy of a grassland regime changed quickly when the grassland regime is interrupted by recent culture events. A grassland regime enabled the restoration of functions after more than five cumulative years in the grassland regime.


2017 ◽  
Vol 26 (1) ◽  
pp. 39-46 ◽  
Author(s):  
Anna Gałązka ◽  
Karolina Gawyjołek ◽  
Andrzej Perzyński ◽  
Rafał Gałązka ◽  
Księżak Jerzy

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