The Dynamic Cell, a visual journey through the cell

2000 ◽  
Vol 28 (3) ◽  
pp. 157
Author(s):  
G.R Parslow
Keyword(s):  
2007 ◽  
Vol 104 (27) ◽  
pp. 11274-11279 ◽  
Author(s):  
K. Y. Miyasaka ◽  
Y. S. Kida ◽  
T. Sato ◽  
M. Minami ◽  
T. Ogura

2008 ◽  
Vol 75 (1) ◽  
pp. 83-92 ◽  
Author(s):  
E. L. King ◽  
K. Tuncay ◽  
P. Ortoleva ◽  
C. Meile

ABSTRACT Microbial activity governs elemental cycling and the transformation of many anthropogenic substances in aqueous environments. Through the development of a dynamic cell model of the well-characterized, versatile, and abundant Geobacter sulfurreducens, we showed that a kinetic representation of key components of cell metabolism matched microbial growth dynamics observed in chemostat experiments under various environmental conditions and led to results similar to those from a comprehensive flux balance model. Coupling the kinetic cell model to its environment by expressing substrate uptake rates depending on intra- and extracellular substrate concentrations, two-dimensional reactive transport simulations of an aquifer were performed. They illustrated that a proper representation of growth efficiency as a function of substrate availability is a determining factor for the spatial distribution of microbial populations in a porous medium. It was shown that simplified model representations of microbial dynamics in the subsurface that only depended on extracellular conditions could be derived by properly parameterizing emerging properties of the kinetic cell model.


Cells ◽  
2018 ◽  
Vol 7 (12) ◽  
pp. 277 ◽  
Author(s):  
Timothy Masiello ◽  
Atul Dhall ◽  
L. Hemachandra ◽  
Natalya Tokranova ◽  
J. Melendez ◽  
...  

The transcoelomic metastasis pathway is an alternative to traditional lymphatic/hematogenic metastasis. It is most frequently observed in ovarian cancer, though it has been documented in colon and gastric cancers as well. In transcoelomic metastasis, primary tumor cells are released into the abdominal cavity and form cell aggregates known as spheroids. These spheroids travel through the peritoneal fluid and implant at secondary sites, leading to the formation of new tumor lesions in the peritoneal lining and the organs in the cavity. Models of this process that incorporate the fluid shear stress (FSS) experienced by these spheroids are few, and most have not been fully characterized. Proposed herein is the adaption of a known dynamic cell culture system, the orbital shaker, to create an environment with physiologically-relevant FSS for spheroid formation. Experimental conditions (rotation speed, well size and cell density) were optimized to achieve physiologically-relevant FSS while facilitating the formation of spheroids that are also of a physiologically-relevant size. The FSS improves the roundness and size consistency of spheroids versus equivalent static methods and are even comparable to established high-throughput arrays, while maintaining nearly equivalent viability. This effect was seen in both highly metastatic and modestly metastatic cell lines. The spheroids generated using this technique were fully amenable to functional assays and will allow for better characterization of FSS’s effects on metastatic behavior and serve as a drug screening platform. This model can also be built upon in the future by adding more aspects of the peritoneal microenvironment, further enhancing its in vivo relevance.


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