scholarly journals Additive QTLs on three chromosomes control flowering time in woodland strawberry (Fragaria vesca L.)

2017 ◽  
Vol 4 (1) ◽  
Author(s):  
Samia Samad ◽  
Takeshi Kurokura ◽  
Elli Koskela ◽  
Tuomas Toivainen ◽  
Vipul Patel ◽  
...  
Keyword(s):  
Flowering Time ◽  
Fragaria Vesca ◽  
Woodland Strawberry ◽  
Control Flowering Time ◽  
Additive Qtls

scholarly journals FT5a interferes with the Dt1‐AP1 feedback loop to control flowering time and shoot determinacy in soybean

2021 ◽  
Author(s):  
Lin Yue ◽  
Xiaoming Li ◽  
Chao Fang ◽  
Liyu Chen ◽  
Hui Yang ◽  
...  
Keyword(s):  
Flowering Time ◽  
Feedback Loop ◽  
Control Flowering Time

scholarly journals N6-Methyladenine DNA Modification in the Woodland Strawberry (Fragaria vesca) Genome Reveals a Positive Relationship With Gene Transcription

2020 ◽  
Vol 10 ◽  
Author(s):  
Shang-Qian Xie ◽  
Jian-Feng Xing ◽  
Xiao-Ming Zhang ◽  
Zhao-Yu Liu ◽  
Mei-Wei Luan ◽  
...  
Keyword(s):  
Gene Transcription ◽  
Positive Relationship ◽  
Fragaria Vesca ◽  
Dna Modification ◽  
Woodland Strawberry

scholarly journals The wild strawberry kinome: identification, classification and transcript profiling of protein kinases during development and in response to gray mold infection

BMC Genomics ◽  
2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Hui Liu ◽  
Wei Qu ◽  
Kaikai Zhu ◽  
Zong-Ming Cheng
Keyword(s):  
Protein Kinases ◽  
Evolutionary Dynamics ◽  
Expression Patterns ◽  
Gene Families ◽  
Gray Mold ◽  
Fragaria Vesca ◽  
Woodland Strawberry ◽  
Go Enrichment ◽  
Potential Link ◽  
Wild Strawberry

Abstract Background Protein kinases (PKs) play an important role in signaling cascades and are one of the largest and most conserved protein super families in plants. Despite their importance, the woodland strawberry (Fragaria vesca) kinome and expression patterns of PK genes remain to be characterized. Results Here, we report on the identification and classification of 954 Fragaria vesca PK genes, which were classified into nine groups and 124 gene families. These genes were distributed unevenly among the seven chromosomes, and the number of introns per gene varied from 0 to 47. Almost half of the putative PKs were predicted to localize to the nucleus and 24.6% were predicted to localize to the cell membrane. The expansion of the woodland strawberry PK gene family occurred via different duplication mechanisms and tandem duplicates occurred relatively late as compared to other duplication types. Moreover, we found that tandem and transposed duplicated PK gene pairs had undergone stronger diversifying selection and evolved relatively faster than WGD genes. The GO enrichment and transcriptome analysis implicates the involvement of strawberry PK genes in multiple biological processes and molecular functions in differential tissues, especially in pollens. Finally, 109 PKs, mostly the receptor-like kinases (RLKs), were found transcriptionally responsive to Botrytis cinerea infection. Conclusions The findings of this research expand the understanding of the evolutionary dynamics of PK genes in plant species and provide a potential link between cell signaling pathways and pathogen attack.

scholarly journals Re-annotation of the woodland strawberry (Fragaria vesca) genome

BMC Genomics ◽  
2015 ◽  
Vol 16 (1) ◽  
pp. 29 ◽  
Author(s):  
Omar Darwish ◽  
Rachel Shahan ◽  
Zhongchi Liu ◽  
Janet P Slovin ◽  
Nadim W Alkharouf
Keyword(s):  
Fragaria Vesca ◽  
Woodland Strawberry

scholarly journals Quantitative trait variation is revealed in a novel hypomethylated population of woodland strawberry (Fragaria vesca)

2016 ◽  
Vol 16 (1) ◽  
Author(s):  
Jihua Xu ◽  
Karen K. Tanino ◽  
Kyla N. Horner ◽  
Stephen J. Robinson
Keyword(s):  
Quantitative Trait ◽  
Fragaria Vesca ◽  
Trait Variation ◽  
Woodland Strawberry
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