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2022 ◽  
Vol Volume 17 ◽  
pp. 65-77
Author(s):  
Anjali Trivedi ◽  
Geetanjali Bade ◽  
Karan Madan ◽  
Muzaffar Bhat ◽  
Randeep Guleria ◽  
...  

Author(s):  
David Smith ◽  
Daniel R. G. Price ◽  
Alison Burrells ◽  
Marc N. Faber ◽  
Katie A. Hildersley ◽  
...  

Gastrointestinal (GI) infections in sheep have significant implications for animal health, welfare and productivity, as well as being a source of zoonotic pathogens. Interactions between pathogens and epithelial cells at the mucosal surface play a key role in determining the outcome of GI infections; however, the inaccessibility of the GI tract in vivo significantly limits the ability to study such interactions in detail. We therefore developed ovine epithelial organoids representing physiologically important gastric and intestinal sites of infection, specifically the abomasum (analogous to the stomach in monogastrics) and ileum. We show that both abomasal and ileal organoids form self-organising three-dimensional structures with a single epithelial layer and a central lumen that are stable in culture over serial passage. We performed RNA-seq analysis on abomasal and ileal tissue from multiple animals and on organoids across multiple passages and show the transcript profile of both abomasal and ileal organoids cultured under identical conditions are reflective of the tissue from which they were derived and that the transcript profile in organoids is stable over at least five serial passages. In addition, we demonstrate that the organoids can be successfully cryopreserved and resuscitated, allowing long-term storage of organoid lines, thereby reducing the number of animals required as a source of tissue. We also report the first published observations of a helminth infecting gastric and intestinal organoids by challenge with the sheep parasitic nematode Teladorsagia circumcincta, demonstrating the utility of these organoids for pathogen co-culture experiments. Finally, the polarity in the abomasal and ileal organoids can be inverted to make the apical surface directly accessible to pathogens or their products, here shown by infection of apical-out organoids with the zoonotic enteric bacterial pathogen Salmonella enterica serovar Typhimurium. In summary, we report a simple and reliable in vitro culture system for generation and maintenance of small ruminant intestinal and gastric organoids. In line with 3Rs principals, use of such organoids will reduce and replace animals in host-pathogen research.


Author(s):  
Jing Chen ◽  
Lang Liu ◽  
Ying Wang ◽  
Zhengguo Li ◽  
Guodong Wang ◽  
...  

ABSTRACT Pogostone, a compound with various pharmaceutical activities, is a major constituent of the essential oil preparation called Pogostemonis Herba, which is obtained from the plant Pogostemon cablin. The biosynthesis of pogostone has not been elucidated, but 4-methylvaleryl-CoA (4MVCoA) is a likely precursor. We analyzed the distribution of pogostone in P. cablin using gas chromatography-mass spectrometry (GC-MS) and found that pogostone accumulates at high levels in main stems and leaves of young plants. A search for the acyl-activating enzyme (AAE) that catalyzes the formation of 4MVCoA from 4-methylvaleric acid was launched, using an RNAseq-based approach to identify 31 unigenes encoding putative AAEs including the PcAAE2, the transcript profile of which shows a strong positive correlation with the distribution pattern of pogostone. The protein encoded by PcAAE2 was biochemically characterized in vitro and shown to catalyze the formation of 4MVCoA from 4-methylvaleric acid. Phylogenetic analysis showed that PcAAE2 is closely related to other AAE proteins in P. cablin and other species that are localized to the peroxisomes. However, PcAAE2 lacks a peroxisome targeting sequence 1 (PTS1) and is localized in the cytosol.


2021 ◽  
Author(s):  
David Smith ◽  
Daniel RG Price ◽  
Alison Burrells ◽  
Marc N Faber ◽  
Katie A Hildersley ◽  
...  

Gastrointestinal (GI) infections in sheep have significant implications for animal health, welfare and productivity, as well as being a source of zoonotic pathogens. Interactions between pathogens and epithelial cells at the mucosal surface play a key role in determining the outcome of GI infections; however, the inaccessibility of the GI tract in vivo significantly limits the ability to study such interactions in detail. We therefore developed ovine epithelial organoids representing physiologically important gastric and intestinal sites of infection, specifically the abomasum (analogous to the stomach in monogastrics) and ileum. We show that both abomasal and ileal organoids form self-organising three-dimensional structures with a single epithelial layer and a central lumen that are stable in culture over serial passage. We performed RNA-seq analysis on abomasal and ileal tissue from multiple animals and on organoids across multiple passages and show the transcript profile of both abomasal and ileal organoids cultured under identical conditions are reflective of the tissue from which they were derived and that the transcript profile in organoids is stable over at least five serial passages. In addition, we demonstrate that the organoids can be successfully cryopreserved and resuscitated, allowing long-term storage of organoid lines, thereby reducing the number of animals required as a source of tissue. We also report the first published observations of a helminth infecting gastric and intestinal organoids by challenge with the sheep parasitic nematode Teladorsagia circumcincta, demonstrating the utility of these organoids for pathogen co-culture experiments. Finally, the polarity in the abomasal and ileal organoids can be inverted to make the apical surface directly accessible to pathogens or their products, here shown by infection of apical-out organoids with the zoonotic enteric bacterial pathogen Salmonella enterica serovar Typhimurium. In summary, we report a simple and reliable in vitro culture system for generation and maintenance of small ruminant intestinal and gastric organoids. In line with 3Rs principals, use of such organoids will reduce and replace animals in host-pathogen research.


Author(s):  
Shuai Chen ◽  
Xin Wu ◽  
Xia Wang ◽  
Yirui Shao ◽  
Qiang Tu ◽  
...  

Iron is an essential metal for both animals and microbiota. In general, neonates and infants of humans and animals are at the risk of iron insufficiency. However, excess dietary iron usually causes negative impacts on the host and microbiota. This study aimed to investigate overloaded dietary iron supplementation on growth performance, the distribution pattern of iron in the gut lumen and the host, intestinal microbiota, and intestine transcript profile of piglets. Sixty healthy weaning piglets were randomly assigned to six groups: fed on diets supplemented with ferrous sulfate monohydrate at the dose of 50 ppm (Fe50 group), 100 ppm (Fe100 group), 200 ppm (Fe200 group), 500 ppm (Fe500 group), and 800 ppm (Fe800), separately, for 3 weeks. The results indicated that increasing iron had no significant effects on growth performance, but increased diarrheal risk and iron deposition in intestinal digesta, tissues of intestine and liver, and serum. High iron also reduced serum iron-binding capacity, apolipoprotein, and immunoglobin A. The RNA-sequencing analysis revealed that iron changed colonic transcript profile, such as interferon gamma-signal transducer and activator of transcription two-based anti-infection gene network. Increasing iron also shifted colonic and cecal microbiota, such as reducing alpha diversity and the relative abundance of Clostridiales and Lactobacillus reuteri and increasing the relative abundance of Lactobacillus and Lactobacillus amylovorus. Collectively, this study demonstrated that high dietary iron increased diarrheal incidence, changed intestinal immune response-associated gene expression, and shifted gut microbiota. The results would enhance our knowledge of iron effects on the gut and microbiome in piglets and further contribute to understanding these aspects in humans.


2020 ◽  
Vol 14 (6) ◽  
pp. 2000007
Author(s):  
Chen Chen ◽  
Liwen Yang ◽  
Mahdi Rivandi ◽  
André Franken ◽  
Tanja Fehm ◽  
...  

2020 ◽  
Vol 35 (Supplement_3) ◽  
Author(s):  
Su Woong Jung ◽  
Ju-Young Moon ◽  
Yang-Gyun Kim ◽  
Kyung Hwan Jeong ◽  
Sang-Ho Lee

Abstract Background and Aims Aging is a natural process accompanied by decline of regenerative potential. Some argue that aging process is just an irreversible physiologic process, whereas some advocate that it should be viewed as disease. Method To determine the nature of kidney aging and kidney disease at transcriptional level, whole kidney RNA sequencing was performed on young (2-month-old), middle-aged (12-month-old), and old (24-month-old) mice and young mice with adenine-induced nephropathy. In addition, young and old mice were fed with either standard or adenine-enriched diet for 4 weeks, and then the degree of renal injury was compared. Results The transcript profile of the old kidneys was mostly involved in inflammation and activation of innate and adaptive immune system and almost same to the transcript alterations of adenine-induced nephropathy. The genes implicated in fibrosis were downregulated until middle-age period, and then upregulated with the advance of age. The old kidneys showed augmented inflammatory response in a model of adenine-induced nephropathy compared with young kidneys, leading to more widespread fibrosis. Conclusion These findings showed that the pathophysiologic process of kidney aging and adenine-induced kidney injury shows similar natures in the context of inflammation and immune response. When kidney injury is superimposed on the aged kidneys, age-related inflammation potentiates inflammatory response and results in increased renal damage.


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