scholarly journals A complete protocol for genome-scale analysis of replication timing in mammalian cells

2010 ◽  
Author(s):  
Tyrone Ryba ◽  
Dana Battaglia ◽  
Benjamin Pope ◽  
Ichiro Hiratani ◽  
David Gilbert
2011 ◽  
Vol 6 (6) ◽  
pp. 870-895 ◽  
Author(s):  
Tyrone Ryba ◽  
Dana Battaglia ◽  
Benjamin D Pope ◽  
Ichiro Hiratani ◽  
David M Gilbert

2018 ◽  
Vol 19 (11) ◽  
pp. 3569 ◽  
Author(s):  
Lilas Courtot ◽  
Jean-Sébastien Hoffmann ◽  
Valérie Bergoglio

Genome stability requires tight regulation of DNA replication to ensure that the entire genome of the cell is duplicated once and only once per cell cycle. In mammalian cells, origin activation is controlled in space and time by a cell-specific and robust program called replication timing. About 100,000 potential replication origins form on the chromatin in the gap 1 (G1) phase but only 20–30% of them are active during the DNA replication of a given cell in the synthesis (S) phase. When the progress of replication forks is slowed by exogenous or endogenous impediments, the cell must activate some of the inactive or “dormant” origins to complete replication on time. Thus, the many origins that may be activated are probably key to protect the genome against replication stress. This review aims to discuss the role of these dormant origins as safeguards of the human genome during replicative stress.


2020 ◽  
Vol 15 (12) ◽  
pp. 4058-4100
Author(s):  
Hisashi Miura ◽  
Saori Takahashi ◽  
Takahiro Shibata ◽  
Koji Nagao ◽  
Chikashi Obuse ◽  
...  

Author(s):  
Marcel Böhrer ◽  
Bart Rymen ◽  
Christophe Himber ◽  
Aude Gerbaud ◽  
David Pflieger ◽  
...  

2018 ◽  
Vol 66 ◽  
pp. 43-47 ◽  
Author(s):  
Juan Á. Patiño-Galindo ◽  
Francisco Domínguez ◽  
María T. Cuevas ◽  
Elena Delgado ◽  
Mónica Sánchez ◽  
...  

2020 ◽  
Vol 69 (7) ◽  
pp. 1293-1305
Author(s):  
Guoshu Bi ◽  
Zhencong Chen ◽  
Xiaodong Yang ◽  
Jiaqi Liang ◽  
Zhengyang Hu ◽  
...  

2020 ◽  
Vol 10 (3) ◽  
pp. 652-654.e17
Author(s):  
B.P.D. Purkayastha ◽  
E.R. Chan ◽  
D. Ravillah ◽  
L. Ravi ◽  
R. Gupta ◽  
...  

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