A new strategy to make an artificial enzyme: photosystem II around nanosized manganese oxide

2017 ◽  
Vol 7 (19) ◽  
pp. 4451-4461 ◽  
Author(s):  
Mohammad Mahdi Najafpour ◽  
Sepideh Madadkhani ◽  
Somayyeh Akbarian ◽  
Małgorzata Hołyńska ◽  
Mohsen Kompany-Zareh ◽  
...  

A new strategy to make an artificial enzyme was reported.

Author(s):  
Zahra Abdi ◽  
Robabeh Bagheri ◽  
Mohammad Reza Mohammadi ◽  
Zhenlun Song ◽  
Mikaela Görlin ◽  
...  

2020 ◽  
Author(s):  
Deng Liu ◽  
Virginia M. Johnson ◽  
Himadri B. Pakrasi

ABSTRACTThe cyanobacterium Synechocystis sp. PCC 6803 is used as a model organism to study photosynthesis, as it can utilize glucose as the sole carbon source to support its growth under heterotrophic conditions. CRISPR interference (CRISPRi) has been widely applied to repress the transcription of genes in a targeted manner in cyanobacteria. However, a robust and reversible induced CRISPRi system has not been explored in Synechocystis 6803 to knock down and recover the expression of a targeted gene. In this study, we built a tightly controlled chimeric promoter, PrhaBAD-RSW, in which a theophylline responsive riboswitch was integrated into a rhamnose-inducible promoter system. We applied this promoter to drive the expression of ddCpf1 (DNase-dead Cpf1 nuclease) in a CRISPRi system and chose the PSII reaction center gene psbD (D2 protein) to target for repression. psbD was specifically knocked down by over 95% of its native expression, leading to severely inhibited Photosystem II activity and growth of Synechocystis 6803 under photoautotrophic conditions. Significantly, removal of the inducers rhamnose and theophylline reversed repression by CRISPRi. Expression of PsbD recovered following release of repression, coupled with increased Photosystem II content and activity. This reversibly induced CRISPRi system in Synechocystis 6803 represents a new strategy for study of the biogenesis of photosynthetic complexes in cyanobacteria.


2013 ◽  
Vol 117 (1-3) ◽  
pp. 423-429 ◽  
Author(s):  
Mohammad Mahdi Najafpour ◽  
Fahimeh Rahimi ◽  
Davood Jafarian Sedigh ◽  
Robert Carpentier ◽  
Julian J. Eaton-Rye ◽  
...  

2020 ◽  
Vol 11 (1) ◽  
Author(s):  
Petko Chernev ◽  
Sophie Fischer ◽  
Jutta Hoffmann ◽  
Nicholas Oliver ◽  
Ricardo Assunção ◽  
...  

AbstractWater oxidation and concomitant dioxygen formation by the manganese-calcium cluster of oxygenic photosynthesis has shaped the biosphere, atmosphere, and geosphere. It has been hypothesized that at an early stage of evolution, before photosynthetic water oxidation became prominent, light-driven formation of manganese oxides from dissolved Mn(2+) ions may have played a key role in bioenergetics and possibly facilitated early geological manganese deposits. Here we report the biochemical evidence for the ability of photosystems to form extended manganese oxide particles. The photochemical redox processes in spinach photosystem-II particles devoid of the manganese-calcium cluster are tracked by visible-light and X-ray spectroscopy. Oxidation of dissolved manganese ions results in high-valent Mn(III,IV)-oxide nanoparticles of the birnessite type bound to photosystem II, with 50-100 manganese ions per photosystem. Having shown that even today’s photosystem II can form birnessite-type oxide particles efficiently, we propose an evolutionary scenario, which involves manganese-oxide production by ancestral photosystems, later followed by down-sizing of protein-bound manganese-oxide nanoparticles to finally yield today’s catalyst of photosynthetic water oxidation.


2018 ◽  
Vol 42 (12) ◽  
pp. 10067-10077 ◽  
Author(s):  
Mohammad Mahdi Najafpour ◽  
Sepideh Madadkhani ◽  
Somayyeh Akbarian ◽  
Zahra Zand ◽  
Małgorzata Hołyńska ◽  
...  

We report on a poly-peptide/Mn oxide nanocomposite as a model for the water-oxidizing catalyst in Photosystem II.


2016 ◽  
Vol 52 (95) ◽  
pp. 13760-13763 ◽  
Author(s):  
Toru Hayashi ◽  
Akira Yamaguchi ◽  
Kazuhito Hashimoto ◽  
Ryuhei Nakamura

Carboxyl groups, abundant residues around the Mn4cluster of photosystem II, stably facilitated electrochemical water oxidation by Mn oxides.


Author(s):  
Zahra Abdi ◽  
Robabeh Bagheri ◽  
Mohammad Reza Mohammadi ◽  
Zhenlun Song ◽  
Mikaela Görlin ◽  
...  

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