scholarly journals Comment on “Causation or only correlation? Application of causal inference graphs for evaluating causality in nano-QSAR models” by N. Sizochenko, A. Gajewicz, J. Leszczynski and T. Puzyn, Nanoscale, 2016, 8, 7203

Nanoscale ◽  
2018 ◽  
Vol 10 (44) ◽  
pp. 20863-20866 ◽  
Author(s):  
Domonkos Attila Tasi ◽  
József Csontos ◽  
Balázs Nagy ◽  
Zoltán Kónya ◽  
Gyula Tasi

An alternative interpretation of toxicity of metal oxide nanoparticles towards bacteria Escherichia Coli.

Author(s):  
Victor E Kuz'min ◽  
Liudmila N Ognichenko ◽  
Natalia Sizochenko ◽  
Valery A. Chapkin ◽  
Sergii I. Stelmakh ◽  
...  

A poor applicability of classic 2D descriptors for representation of metal oxide nanoparticles is briefly discussed. The combination of 1D descriptors with previously calculated size-dependent descriptors is utilized to represent the structural features of nanoparticles in QSAR modeling. For this purpose, descriptors based on the fundamental characteristics of atoms (nuclear charge, oxidation level, electronegativity, ionic radius, ionic refraction etc.) were combined with those derived from structural formula (doublets –A2, AB, …; triplets – A3, A2B, ABC, … etc.) and “liquid drop model” derived size-dependent parameters. Nano-QSAR models are developed for cytotoxicity of metal oxide nanoparticles against E. coli and HaCaT cells. Two developed nano-QSAR models are discussed in terms of cluster analysis.


Author(s):  
Victor E Kuz'min ◽  
Liudmila N Ognichenko ◽  
Natalia Sizochenko ◽  
Valery A. Chapkin ◽  
Sergii I. Stelmakh ◽  
...  

A poor applicability of classic 2D descriptors for representation of metal oxide nanoparticles is briefly discussed. The combination of 1D descriptors with previously calculated size-dependent descriptors is utilized to represent the structural features of nanoparticles in QSAR modeling. For this purpose, descriptors based on the fundamental characteristics of atoms (nuclear charge, oxidation level, electronegativity, ionic radius, ionic refraction etc.) were combined with those derived from structural formula (doublets –A2, AB, …; triplets – A3, A2B, ABC, … etc.) and “liquid drop model” derived size-dependent parameters. Nano-QSAR models are developed for cytotoxicity of metal oxide nanoparticles against E. coli and HaCaT cells. Two developed nano-QSAR models are discussed in terms of cluster analysis.


2015 ◽  
Vol 49 (2) ◽  
pp. 1105-1112 ◽  
Author(s):  
Chitrada Kaweeteerawat ◽  
Angela Ivask ◽  
Rong Liu ◽  
Haiyuan Zhang ◽  
Chong Hyun Chang ◽  
...  

Chemosphere ◽  
2012 ◽  
Vol 89 (9) ◽  
pp. 1098-1102 ◽  
Author(s):  
Andrey A. Toropov ◽  
Alla P. Toropova ◽  
Emilio Benfenati ◽  
Giuseppina Gini ◽  
Tomasz Puzyn ◽  
...  

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