scholarly journals Alternatively spliced mRNA variants of chloroplast ascorbate peroxidase isoenzymes in spinach leaves

1999 ◽  
Vol 338 (1) ◽  
pp. 41 ◽  
Author(s):  
Kazuya YOSHIMURA ◽  
Yukinori YABUTA ◽  
Masahiro TAMOI ◽  
Takahiro ISHIKAWA ◽  
Shigeru SHIGEOKA
1999 ◽  
Vol 338 (1) ◽  
pp. 41-48 ◽  
Author(s):  
Kazuya YOSHIMURA ◽  
Yukinori YABUTA ◽  
Masahiro TAMOI ◽  
Takahiro ISHIKAWA ◽  
Shigeru SHIGEOKA

We have previously shown that stromal and thylakoid-bound ascorbate peroxidase (APX) isoenzymes of spinach chloroplasts arise from a common pre-mRNA by alternative splicing in the C-terminus of the isoenzymes [Ishikawa, Yoshimura, Tamoi, Takeda and Shigeoka (1997) Biochem. J. 328, 795–800]. To explore the production of mature, functional mRNA encoding chloroplast APX isoenzymes, reverse transcriptase-mediated PCR and S1 nuclease protection analysis were performed with poly(A)+ RNA or polysomal RNA from spinach leaves. As a result, four mRNA variants, one form of thylakoid-bound APX (tAPX-I) and three forms of stromal APX (sAPX-I, sAPX-II and sAPX-III), were identified. The sAPX-I and sAPX-III mRNA species were generated through the excision of intron 11; they encoded the previously identified sAPX protein. Interestingly, the sAPX-II mRNA was generated by the insertion of intron 11 between exons 11 and 12. The use of this insertional sequence was in frame with the coding sequence and would lead to the production of a novel isoenzyme containing a C-terminus in which a seven-residue sequence replaced the last residue of the previously identified sAPX. The recombinant novel enzyme expressed in Escherichia coli showed the same enzymic properties (except for molecular mass) as the recombinant sAPX from the previously identified sAPX-I mRNA, suggesting that the protein translated from the sAPX-II mRNA is functional as a soluble APX in vivo. The S1 nuclease protection analysis showed that the expression levels of mRNA variants for sAPX and tAPX isoenzymes are in nearly equal quantities throughout the spinach leaves grown under normal conditions. The present results demonstrate that the expression of chloroplast APX isoenzymes is regulated by a differential splicing efficiency that is dependent on the 3´-terminal processing of ApxII, the gene encoding the chloroplast APX isoenzymes.


1991 ◽  
Vol 286 (2) ◽  
pp. 371-375 ◽  
Author(s):  
Kiyoshi Tanaka ◽  
Eriko Takeuchi ◽  
Akihiro Kubo ◽  
Takeshi Sakaki ◽  
Kazutomo Haraguchi ◽  
...  

2019 ◽  
Author(s):  
Joun Park ◽  
Yi Zhu ◽  
Xianzun Tao ◽  
Jennifer M. Brazill ◽  
Chong Li ◽  
...  

SUMMARYUnderstanding endogenous regulation of stress resistance and homeostasis maintenance is critical to developing neuroprotective therapies. Nicotinamide mononucleotide adenylyltransferase (NMNAT) is a conserved essential enzyme that confers extraordinary protection and stress resistance in many neurodegenerative disease models. Drosophila Nmnat is alternatively spliced to two mRNA variants, RA and RB. RB translates to protein isoform PD with robust protective activity and is upregulated upon stress to confer enhanced neuroprotection. The mechanisms regulating alternative splicing and stress response of NMNAT remain unclear. We have discovered a Drosophila microRNA, dme-miR-1002, which promotes the splicing of NMNAT pre-mRNA to RB by disrupting a pre-mRNA stem-loop structure. While NMNAT pre-mRNA is preferentially spliced to RA in basal conditions, miR-1002 enhances NMNAT PD-mediated stress protection by binding via RISC component Argonaute1 to the pre-mRNA, facilitating the splicing switch to RB. These results outline a new process for microRNAs in regulating alternative splicing and modulating stress resistance.


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