X‐Ray Crystallographic Investigations of an Azacryptand and its Bis‐Protonated Salt: Interactions of Acyclic Water Trimer and C‐H…π Interactions in T‐shaped Benzene Dimer

In this paper, (2E,6E)-2,6-Bis(2,3,4-tri-methoxy -benzylidene)cyclohexanone (omitted as tmbcho) (1) was obtained by the reaction of acetic acid, tetrahydrofuran, cyclohexanone and 2,3,4-tri-methoxy-benzaldehyde. Three non-classic hydrogen bonds were observed in the compound. X-ray crystallography shows that the crystal structure is stabilized by intermolecular C-H•••π interactions and it contains plenty of conjugated double bonds. The title compound was characterized by UV-vis and fluorescent spectral studies.

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Polymeric bidimensional self-assembling of [HgII(RC6H4NNNC6H4R)2Py] (R=m-acetyl) through metal-η2,η2-arene π-interactions and non classical C–H⋯O bonding: Synthesis and X-ray characterization of a bis diaryl symmetric-substituted triazenide complex of Hg(II)

Journal of Organometallic Chemistry ◽

10.1016/j.jorganchem.2005.12.010 ◽

2006 ◽

Vol 691 (6) ◽

pp. 1311-1314 ◽

Cited By ~ 21

Author(s):

Manfredo Hörner ◽

Gelson Manzoni de Oliveira ◽

Eduardo Giuliani Koehler ◽

Lorenzo do CantoVisentin

Keyword(s):

X Ray ◽

Π Interactions ◽

Self Assembling

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Crystal structure from X-ray powder diffraction data, DFT-D calculation, Hirshfeld surface analysis, and energy frameworks of (RS)-trichlormethiazide

Acta Crystallographica Section E Crystallographic Communications ◽

10.1107/s2056989021013633 ◽

2022 ◽

Vol 78 (2) ◽

Author(s):

Robert A. Toro ◽

Analio Dugarte-Dugarte ◽

Jacco van de Streek ◽

José Antonio Henao ◽

José Miguel Delgado ◽

...

Keyword(s):

Hydrogen Bonds ◽

Surface Analysis ◽

Powder Diffraction ◽

Diffraction Data ◽

Electrostatic Interactions ◽

Hirshfeld Surface ◽

Hirshfeld Surface Analysis ◽

Powder Diffraction Data ◽

X Ray ◽

Π Interactions

The structure of racemic (RS)-trichlormethiazide [systematic name: (RS)-6-chloro-3-(dichloromethyl)-1,1-dioxo-3,4-dihydro-2H-1λ6,2,4-benzothiadiazine-7-sulfonamide], C8H8Cl3N3O4S2 (RS-TCMZ), a diuretic drug used in the treatment of oedema and hypertension, was determined from laboratory X-ray powder diffraction data using DASH [David et al. (2006). J. Appl. Cryst. 39, 910–915.], refined by the Rietveld method with TOPAS-Academic [Coelho (2018). J. Appl. Cryst. 51, 210–218], and optimized using DFT-D calculations. The extended structure consists of head-to-tail dimers connected by π–π interactions which, in turn, are connected by C—Cl...π interactions. They form chains propagating along [101], further connected by N—H...O hydrogen bonds to produce layers parallel to the ac plane that stack along the b-axis direction, connected by additional N—H...O hydrogen bonds. The Hirshfeld surface analysis indicates a major contribution of H...O and H...Cl interactions (32.2 and 21.7%, respectively). Energy framework calculations confirm the major contribution of electrostatic interactions (E elec) to the total energy (E tot). A comparison with the structure of S-TCMZ is also presented.

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A Zinc(II)-Silver(I) Bimetallic Coordination Polymer Assembled Through Argentophilic and π-π Interactions, f[Zn(phen)2(H2O) {Ag(CN)2g][Ag(CN)2]·MeOH}n (phen=1,10-Phenanthroline)

Zeitschrift für Naturforschung B ◽

10.5560/znb.2013-2253 ◽

2013 ◽

Vol 68 (2) ◽

pp. 161-167 ◽

Cited By ~ 8

Author(s):

Muhammad Monim-ul-Mehbooba ◽

Muhammad Ramzan ◽

Tobias Rüffe ◽

Heinrich Lang ◽

Shafqat Naddem ◽

...

Keyword(s):

Crystal Structure ◽

Thermal Analysis ◽

Ir Spectroscopy ◽

Coordination Polymer ◽

Hydrogen Bonds ◽

X Ray ◽

Π Interactions ◽

X Ray Crystallography ◽

3D Network ◽

Argentophilic Interactions

A cyanido-bridged Zn(II)-Ag(I) bimetallic coordination polymer, {[Zn(phen)2(H2O){Ag(CN)2}] [Ag(CN)2]·MeOH}n (1), was prepared using ZnCl2, 1,10-phenanthroline (phen) and K[Ag(CN)2] and characterized by IR spectroscopy, thermal analysis and X-ray crystallography. The crystal structure of 1 consists of dinuclear [Zn(phen)2(H2O){Ag(CN)2}]+ cations, [Ag(CN)2]- anions and a methanol molecule. The non-coordinated [Ag(CN)2]- anions are linked to the [Zn(phen)2(H2O){Ag(CN)2}]+ complex cations through argentophilic interactions leading to the formation of chains. The chains are connected by hydrogen bonds and π-π interactions to give a 3D network.

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Adsorption behaviour of a CdII–triazole MOF for butan-2-one in a single-crystal-to-single-crystal (SCSC) fashion: the role of hydrogen bonding and C—H...π interactions

Acta Crystallographica Section C Structural Chemistry ◽

10.1107/s2053229619006788 ◽

2019 ◽

Vol 75 (6) ◽

pp. 806-811

Author(s):

Jia Wang ◽

Tianchao You ◽

Teng Wang ◽

Qikui Liu ◽

Jianping Ma ◽

...

Keyword(s):

Hydrogen Bonding ◽

Single Crystal ◽

Specific Binding ◽

Supramolecular Interactions ◽

Adsorption Behaviour ◽

X Ray Diffraction ◽

Guest Molecules ◽

X Ray ◽

Π Interactions ◽

H Nmr

The adsorption behaviour of the CdII–MOF {[Cd(L)2(ClO4)2]·H2O (1), where L is 4-amino-3,5-bis[3-(pyridin-4-yl)phenyl]-1,2,4-triazole, for butan-2-one was investigated in a single-crystal-to-single-crystal (SCSC) fashion. A new host–guest system that encapsulated butan-2-one molecules, namely poly[[bis{μ3-4-amino-3,5-bis[3-(pyridin-4-yl)phenyl]-1,2,4-triazole}cadmium(II)] bis(perchlorate) butanone sesquisolvate], {[Cd(C24H18N6)2](ClO4)2·1.5C4H8O} n , denoted C4H8O@Cd-MOF (2), was obtained via an SCSC transformation. MOF 2 crystallizes in the tetragonal space group P43212. The specific binding sites for butan-2-one in the host were determined by single-crystal X-ray diffraction studies. N—H...O and C—H...O hydrogen-bonding interactions and C—H...π interactions between the framework, ClO4 − anions and guest molecules co-operatively bind 1.5 butan-2-one molecules within the channels. The adsorption behaviour was further evidenced by 1H NMR, IR, TGA and powder X-ray diffraction experiments, which are consistent with the single-crystal X-ray analysis. A 1H NMR experiment demonstrates that the supramolecular interactions between the framework, ClO4 − anions and guest molecules in MOF 2 lead to a high butan-2-one uptake in the channel.

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The Importance of CH···X (X = O, π) Interaction of a New Mixed Ligand Cu(II) Coordination Polymer: Structure, Hirshfeld Surface and Theoretical Studies

Crystals ◽

10.3390/cryst8120455 ◽

2018 ◽

Vol 8 (12) ◽

pp. 455 ◽

Cited By ~ 16

Author(s):

Saikat Seth

Keyword(s):

Solid State ◽

Hydrogen Bonds ◽

Noncovalent Interactions ◽

Carbonyl Oxygen ◽

Hirshfeld Surface ◽

Mixed Ligand ◽

Binding Energies ◽

Zigzag Chain ◽

X Ray ◽

Π Interactions

In this study, a new equimolar (1:1:1) mixed ligand Cu(II) polymer, [Cu(IDA)(ImP)]n (1) with iminodiacetato (IDA) and imidazo[1,2-a]-pyridine (ImP) was synthesized and characterized by single crystal X-ray diffraction analysis. X-ray crystallography reveals that compound (1) consists of polymeric zigzag chain along [010] the carboxylate carbonyl oxygen atom by two-fold symmetry screw axis. The solid-state structure is stabilized through C–H···O hydrogen bonds and C–H···π interactions that lead the molecules to generate two-dimensional supramolecular assemblies. The intricate combinations of hydrogen bonds and C–H···π interactions are fully described along with computational studies. A thorough analysis of Hirshfeld surface and fingerprint plots elegantly quantify the interactions involved within the structure. The binding energies associated with the noncovalent interactions observed in the crystal structure and the interplay between them were calculated using theoretical DFT calculations. Weak noncovalent interactions were analyzed and characterized using Bader’s theory of ‘‘atoms-in-molecules’’ (AIM). Finally, the solid-state supramolecular assembly was characterized by the “Noncovalent Interaction” (NCI) plot index.

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Polymorphism of Trimeric Perfluoro-ortho-phenylene Mercury, [Hg(o-C6F4)]3

Zeitschrift für Naturforschung B ◽

10.1515/znb-2004-11-1218 ◽

2004 ◽

Vol 59 (11-12) ◽

pp. 1483-1487 ◽

Cited By ~ 12

Author(s):

Mason R. Haneline ◽

François P. Gabbaï

Keyword(s):

Single Crystal ◽

Electrostatic Interactions ◽

Van Der Waals ◽

Relativistic Effects ◽

Van Der Waals Interactions ◽

X Ray Diffraction ◽

X Ray ◽

Π Interactions

Three new modifications of trimeric perfluoro-ortho-phenylene mercury (2) have been investigated by single crystal X-ray diffraction. In each of these modifications, the molecules of 2 form extended stacks. Within each stack, the successive molecules are parallel and separated by approximately 3.3 - 3.4 Å. The packing observed in the different structures is rationalized on the basis of secondary mercury-π interactions, mercuriophilic interactions and electrostatic interactions. Altogether, little preference is given for one particular type of interaction. The packing appears to be dominated by non-directional van der Waals interactions between molecules of 2 which are largely aromatic and whose overall polarizability is magnified by relativistic effects at the mercury(II) centers.

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