scholarly journals GP3: GenePix post-processing program for automated analysis of raw microarray data

2002 ◽  
Vol 18 (5) ◽  
pp. 771-773 ◽  
Author(s):  
M. R. Fielden ◽  
R. G. Halgren ◽  
E. Dere ◽  
T. R. Zacharewski
2020 ◽  
Vol 16 ◽  
pp. 2260-2271
Author(s):  
Akul Y Mehta ◽  
Jamie Heimburg-Molinaro ◽  
Richard D Cummings

Glycans are one of the major biological polymers found in the mammalian body. They play a vital role in a number of physiologic and pathologic conditions. Glycan microarrays allow a plethora of information to be obtained on protein–glycan binding interactions. In this review, we describe the intricacies of the generation of glycan microarray data and the experimental methods for studying binding. We highlight the importance of this knowledge before moving on to the data analysis. We then highlight a number of tools for the analysis of glycan microarray data such as data repositories, data visualization and manual analysis tools, automated analysis tools and structural informatics tools.


1998 ◽  
Vol 120 (04) ◽  
pp. 59-61
Author(s):  
Kevin Parker

This article focuses on carryover at a paper mill that had been solved using computational fluid dynamics (CFD) to visualize flow within the boiler. Technicians had tried adjusting airflow and firing arrangements without success. They turned the problem over to analysts who simulated the airflow within the boiler using CFD. An animated sequence of streamlines showing airflow provided engineers with a clear understanding of exactly what was happening inside the boiler, making it relatively easy to adjust operating conditions and solve the problem. McDermott analysts use FIELDVIEW, a commercial post-processing program from Intelligent Light in Lyndhurst, NJ. With the software, the analyst can create three-dimensional perspective views with hidden-line removal and light shading. She or He can trace the path of a marker traveling along with the fluid through a series of animated views. The analysts made a second FIELDVIEW movie of the airflow conditions with the new arrangement, showing the elimination of the center core. They played the two movies simultaneously on two monitors set side-by-side to demonstrate for the customer’s engineers how the recommended changes would solve the problem.


2011 ◽  
Vol 141 ◽  
pp. 438-441
Author(s):  
M.K. Shao ◽  
Z. Wang ◽  
Jing Zhang Zhi ◽  
Rong Zong Wu ◽  
Run Wang

This article introduces the main task and trend of post processing of 5-linkage CNC machine. The kinematics model of 5-axis linkage CNC machine with two rotary tables was established by using the theory of mechanism and homogeneous coordinate transformation. The distribution of linear coordinate transformation and the rotate angle of machine tools were deduced by analyzing the kinematics model. Referencing above formulae, the machine’s post processing program was compiled in SOLIDCAM according to specific machine’s structure. The NC code of impeller was generated by it, and simulated it in VERICUT. The program has past the verification on TDNC-W200. The trend of post processing was got after analyzing the problem of it at last.


2008 ◽  
Vol 33-37 ◽  
pp. 827-832
Author(s):  
Yasuhiro Kanto

In this paper, a general post processing program for J-integral calculation is developed to apply to arbitrary shaped cracks in a three dimensional body. Usually J-integral calculation programs are options for specific stress analysis programs and they are not applicable to results from different analysis programs. In most cases, there are many limitations in analysis models or shapes of cracks. This situation is not favorable for users. This paper will demonstrate a development of a post-processing program to calculate J-integral for arbitrary shaped cracks in a three dimensional body. This program requires only discrete data of displacements and stresses at nodal or numerical integration points. Users can use their own programs for stress analyses and calculate J-integral after that. In this paper, errors in approximation will be discussed as the first stage of the development.


2019 ◽  
Vol 18 (12) ◽  
pp. 2516-2523 ◽  
Author(s):  
Ryan J. Lumpkin ◽  
Elizabeth A. Komives

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