Impact of Pleistocene geoclimatic events on the genetic structure in mid-latitude South American plants: insights from the phylogeography of Turnera sidoides complex (Passifloraceae, Turneroideae)

Author(s):  
E M Sara Moreno ◽  
Loreta Brandão de Freitas ◽  
Pablo R Speranza ◽  
Viviana G Solís Neffa
2021 ◽  
Vol 9 (5) ◽  
pp. 919
Author(s):  
Sophia Di Cataldo ◽  
Aitor Cevidanes ◽  
Claudia Ulloa-Contreras ◽  
Irene Sacristán ◽  
Diego Peñaloza-Madrid ◽  
...  

Blood samples of 626 rural dogs, 140 Andean foxes (Lycalopex culpaeus), and 83 South American grey foxes (L. griseus) from six bioregions of Chile spanning 3000 km were screened for Mycoplasma DNA by conventional PCR and sequencing. Risk factors of infection were inferred using Generalized Linear Mixed Models and genetic structure by network analyses. Overall, Mycoplasma haemocanis/Mycoplasma haemofelis (Mhc/Mhf) and Candidatus Mycoplasma haematoparvum (CMhp) observed prevalence was 23.8% and 12.8% in dogs, 20.1% and 7.2% in Andean foxes, and 26.5% and 8.4% in grey foxes, respectively. Both hemoplasmas were confirmed in all the bioregions, with higher prevalence in those where ticks from the Rhipicephalus sanguineus species group were absent. Candidatus M. haematominutum and a Mycoplasma sp. previously found in South American carnivores were detected in one fox each. Although the most prevalent Mhc/Mhf and CMhp sequence types were shared between dogs and foxes, network analysis revealed genetic structure of Mhc/Mhf between hosts in some regions. Male sex was associated with a higher risk of Mhc/Mhf and CMhp infection in dogs, and adult age with CMhp infection, suggesting that direct transmission is relevant. No risk factor was identified in foxes. Our study provides novel information about canine hemoplasmas with relevance in distribution, transmission routes, and cross-species transmission.


2017 ◽  
Vol 7 (20) ◽  
pp. 8363-8378 ◽  
Author(s):  
Esteban Botero-Delgadillo ◽  
Verónica Quirici ◽  
Yanina Poblete ◽  
Élfego Cuevas ◽  
Sylvia Kuhn ◽  
...  

PLoS ONE ◽  
2018 ◽  
Vol 13 (2) ◽  
pp. e0192107 ◽  
Author(s):  
Carolina Pometti ◽  
Cecilia Bessega ◽  
Ana Cialdella ◽  
Mauricio Ewens ◽  
Beatriz Saidman ◽  
...  

2021 ◽  
Author(s):  
Garrett M Janzen ◽  
María Rocío Aguilar-Rangel ◽  
Carolina Cíntora-Martínez ◽  
Karla Azucena Blöcher-Juárez ◽  
Eric González-Segovia ◽  
...  

Populations are locally adapted when they exhibit higher fitness than foreign populations in their native habitat. Maize landrace adaptations to highland and lowland conditions are of interest to researchers and breeders. To determine the prevalence and strength of local adaptation in maize landraces, we performed a reciprocal transplant experiment across an elevational gradient in Mexico. We grew 120 landraces, grouped into four populations (Mexican Highland, Mexican Lowland, South American Highland, South American Lowland), in Mexican highland and lowland common gardens and collected phenotypes relevant to fitness, as well as reported highland-adaptive traits such as anthocyanin pigmentation and macrohair density. 67k DArTseq markers were generated from field specimens to allow comparison between phenotypic patterns and population genetic structure. We found phenotypic patterns consistent with local adaptation, though these patterns differ between the Mexican and South American populations. While population genetic structure largely recapitulates drift during post-domestication dispersal, landrace phenotypes reflect adaptations to native elevation. Quantitative trait QST was greater than neutral FST for many traits, signaling divergent directional selection between pairs of populations. All populations exhibited higher fitness metric values when grown at their native elevation, and Mexican landraces had higher fitness than South American landraces when grown in our Mexican sites. Highland populations expressed generally higher anthocyanin pigmentation than lowland populations, and more so in the highland site than in the lowland site. Macrohair density was largely non-plastic, and Mexican landraces and highland landraces were generally more pilose. Analysis of δ13C indicated that lowland populations may have lower WUE. Each population demonstrated garden-specific correlations between highland trait expression and fitness, with stronger positive correlations in the highland site. These results give substance to the long-held presumption of local adaptation of New World maize landraces to elevation and other environmental variables across North and South America.


PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e4173 ◽  
Author(s):  
Cristian B. Canales-Aguirre ◽  
Sandra Ferrada-Fuentes ◽  
Ricardo Galleguillos ◽  
Fernanda X. Oyarzun ◽  
Cristián E. Hernández

Previous studies of population genetic structure inDissostichus eleginoideshave shown that oceanographic and geographic discontinuities drive in this species population differentiation. Studies have focused on the genetics ofD.eleginoidesin the Southern Ocean; however, there is little knowledge of their genetic variation along the South American continental shelf. In this study, we used a panel of six microsatellites to test whetherD.eleginoidesshows population genetic structuring in this region. We hypothesized that this species would show zero or very limited genetic structuring due to the habitat continuity along the South American shelf from Peru in the Pacific Ocean to the Falkland Islands in the Atlantic Ocean. We used Bayesian and traditional analyses to evaluate population genetic structure, and we estimated the number of putative migrants and effective population size. Consistent with our predictions, our results showed no significant genetic structuring among populations of the South American continental shelf but supported two significant and well-defined genetic clusters ofD.eleginoidesbetween regions (South American continental shelf and South Georgia clusters). Genetic connectivity between these two clusters was 11.3% of putative migrants from the South American cluster to the South Georgia Island and 0.7% in the opposite direction. Effective population size was higher in locations from the South American continental shelf as compared with the South Georgia Island. Overall, our results support that the continuity of the deep-sea habitat along the continental shelf and the biological features of the study species are plausible drivers of intraspecific population genetic structuring across the distribution ofD.eleginoideson the South American continental shelf.


Genetics ◽  
1976 ◽  
Vol 82 (1) ◽  
pp. 103-121
Author(s):  
R H Ward ◽  
James V Neel

ABSTRACT The Yanomama Indians are a South American tribe distributed over an irregular area approximately 200 × 300 miles. The gene frequencies observed at 12 loci in 47 villages within this area have been analyzed for the occurrence of clines. Apparently significant clines are observed for alleles of the Rh, MNSs, Kidd, Gm, Inv and serum albumin system. Available data concerning recent tribal expansion and admixture permit a tentative analysis of the causes of these clines. Although the action of selection cannot be rigorously excluded, it seems unlikely to be the major cause. Admixture with surrounding tribes plays a role which can be quantified because of the fortuitous circumstance of two genetic markers for admixture. It is suggested that an important factor in the origin of these clines is the manner in which the tribe has recently expanded through successive village fissionings and a predominantly centrifugal pattern of village migration.


Parasitology ◽  
2000 ◽  
Vol 121 (4) ◽  
pp. 403-408 ◽  
Author(s):  
H. HIGO ◽  
T. YANAGI ◽  
V. MATTA ◽  
T. AGATSUMA ◽  
A. CRUZ-REYES ◽  
...  

Isozyme analysis (12 enzymes: 14 loci) was conducted on 99 isolates of Trypanosoma cruzi: 77 from Guatemala, 5 from Mexico and 17 from South American countries. Analyses of 4 population-genetic indices were undertaken to assess the possibility of genetic exchange occurring among Guatemalan isolates. The results provide evidence for a degree of genetic exchange occurring among isolates from this relatively small geographical area. Previous studies of population genetics on T. cruzi might have failed to detect this phenomenon because they tended to use isolates originating far from one another, rendering gene exchange unlikely for geographical reasons. Phylogenetic data, presented here, show considerable differences in genetic structure between Central and South American isolates, suggesting that different biological and clinical properties might be expected. For example, there are differences in clinical syndromes between Central and South America, a situation discussed further here.


1997 ◽  
Vol 27 (11) ◽  
pp. 1369-1374 ◽  
Author(s):  
H. Higo ◽  
T. Yanagi ◽  
V. Matta ◽  
T. Agatsuma ◽  
H. Kanbara ◽  
...  

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