scholarly journals Rules of Nonallelic Noncomplementation at the Synapse in Caenorhabditis elegans

Genetics ◽  
2001 ◽  
Vol 158 (1) ◽  
pp. 209-220 ◽  
Author(s):  
Karen J Yook ◽  
Stephen R Proulx ◽  
Erik M Jorgensen
Keyword(s):  
Caenorhabditis Elegans ◽  
Gene Product ◽  
Genetic Interaction ◽  
Synaptic Proteins ◽  
Null Alleles ◽  
Nematode Caenorhabditis Elegans ◽  
Recessive Mutations ◽  
Genes Encoding ◽  
Physical Interactions ◽  
Encoding Gene

Abstract Nonallelic noncomplementation occurs when recessive mutations in two different loci fail to complement one another, in other words, the double heterozygote exhibits a phenotype. We observed that mutations in the genes encoding the physically interacting synaptic proteins UNC-13 and syntaxin/UNC-64 failed to complement one another in the nematode Caenorhabditis elegans. Noncomplementation was not observed between null alleles of these genes and thus this genetic interaction does not occur with a simple decrease in dosage at the two loci. However, noncomplementation was observed if at least one gene encoded a partially functional gene product. Thus, this genetic interaction requires a poisonous gene product to sensitize the genetic background. Nonallelic noncomplementation was not limited to interacting proteins: Although the strongest effects were observed between loci encoding gene products that bind to one another, interactions were also observed between proteins that do not directly interact but are members of the same complex. We also observed noncomplementation between genes that function at distant points in the same pathway, implying that physical interactions are not required for nonallelic noncomplementation. Finally, we observed that mutations in genes that function in different processes such as neurotransmitter synthesis or synaptic development complement one another. Thus, this genetic interaction is specific for genes acting in the same pathway, that is, for genes acting in synaptic vesicle trafficking.

ISOLATION AND GENETIC CHARACTERIZATION OF CELL-LINEAGE MUTANTS OF THE NEMATODE CAENORHABDITIS ELEGANS

Genetics ◽  
1980 ◽  
Vol 96 (2) ◽  
pp. 435-454 ◽  
Author(s):  
H Robert Horvitz ◽  
John E Sulston
Keyword(s):  
Caenorhabditis Elegans ◽  
Cell Lineage ◽  
Embryonic Cell ◽  
Null Alleles ◽  
Recessive Mutation ◽  
Incomplete Penetrance ◽  
Nematode Caenorhabditis Elegans ◽  
Cell Lineages ◽  
Cell Divisions ◽  
Recessive Mutations

ABSTRACT Twenty-four mutants that alter the normally invariant post-embryonic cell lineages of the nematode Caenorhabditis elegans have been isolated and genetically characterized. In some of these mutants, cell divisions fail that occur in wild-type animals; in other mutants, cells divide that do not normally do so. The mutants differ in the specificities of their defects, so that it is possible to identify mutations that affect some cell lineages but not others. These mutants define 14 complementation groups, which have been mapped. The abnormal phenotype of most of the cell-lineage mutants results from a single recessive mutation; however, the excessive cell divisions characteristic of one strain, CB1322, require the presence of two unlinked recessive mutations. All 24 cell-lineage mutants display incomplete penetrance and/or variable expressivity. Three of the mutants are suppressed by pleiotropic suppressors believed to be specific for null alleles, suggesting that their phenotypes result from the complete absence of gene activity.

scholarly journals Effect of a Neuropeptide Gene on Behavioral States in Caenorhabditis elegans Egg-Laying

Genetics ◽  
2000 ◽  
Vol 154 (3) ◽  
pp. 1181-1192 ◽  
Author(s):  
Laura E Waggoner ◽  
Laura Anne Hardaker ◽  
Steven Golik ◽  
William R Schafer
Keyword(s):  
Caenorhabditis Elegans ◽  
Active Phase ◽  
Egg Laying ◽  
Sensory Cues ◽  
Nematode Caenorhabditis Elegans ◽  
Inactive State ◽  
Recessive Mutations ◽  
Inactive Phase ◽  
Behavioral States ◽  
Stimulation Of

Abstract Egg-laying behavior in the nematode Caenorhabditis elegans involves fluctuation between alternative behavioral states: an inactive state, during which eggs are retained in the uterus, and an active state, during which eggs are laid in bursts. We have found that the flp-1 gene, which encodes a group of structurally related neuropeptides, functions specifically to promote the switch from the inactive to the active egg-laying state. Recessive mutations in flp-1 caused a significant increase in the duration of the inactive phase, yet egg-laying within the active phase was normal. This pattern resembled that previously observed in mutants defective in the biosynthesis of serotonin, a neuromodulator implicated in induction of the active phase. Although flp-1 mutants were sensitive to stimulation of egg-laying by serotonin, the magnitude of their serotonin response was abnormally low. Thus, the flp-1-encoded peptides and serotonin function most likely function in concert to facilitate the onset of the active egg-laying phase. Interestingly, we observed that flp-1 is necessary for animals to down-regulate their rate of egg-laying in the absence of food. Because flp-1 is known to be expressed in interneurons that are postsynaptic to a variety of chemosensory cells, the FLP-1 peptides may function to regulate the activity of the egg-laying circuitry in response to sensory cues.

GENETIC STUDIES OF UNUSUAL LOCI THAT AFFECT BODY SHAPE OF THE NEMATODE CAENORHABDITIS ELEGANS AND MAY CODE FOR CUTICLE STRUCTURAL PROTEINS

Genetics ◽  
1986 ◽  
Vol 113 (3) ◽  
pp. 621-639
Author(s):  
Meredith Kusch ◽  
R S Edgar
Keyword(s):  
Caenorhabditis Elegans ◽  
Body Shape ◽  
Structural Proteins ◽  
Null Alleles ◽  
Wild Type ◽  
Nematode Caenorhabditis Elegans ◽  
Genetic Studies ◽  
Wild Type Phenotype ◽  
Mutant Phenotypes ◽  
Collagen Genes

ABSTRACT In Caenorhabditis elegans, four loci (sqt-1, sqt-2, sqt-3 and rol-8) in which mutations affect body shape and cuticle morphology have unusual genetic properties. (1) Mutant alleles of sqt-1 can interact to produce animals with a variety of mutant phenotypes: left roller, right roller, dumpy and long. At least three mutant phenotypes are specified by mutations in the sqt-3 locus. (2) Most alleles at these loci are either dominant or cryptic dominant (i.e., are dominant only in certain genetic backgrounds). (3) Most alleles of these loci exhibit codominance. (4) Two putative null alleles of the sqt-1 locus produce a wild-type phenotype. (5) Many alleles of these genes demonstrate unusual intergenic interactions that are not the result of simple epistasis: animals doubly heterozygous for mutations at two loci often display unexpected and unpredictable phenotypes. We suggest that these genetic properties might be expected of genes, such as the collagen genes, the products of which interact to form the animal's cuticle, and which are member genes of a gene family.

scholarly journals unc-93(e1500): A BEHAVIORAL MUTANT OF CAENORHABDITIS ELEGANS THAT DEFINES A GENE WITH A WILD-TYPE NULL PHENOTYPE

Genetics ◽  
1980 ◽  
Vol 96 (1) ◽  
pp. 147-164 ◽  
Author(s):  
Iva S Greenwald ◽  
H Robert Horvitz
Keyword(s):  
Caenorhabditis Elegans ◽  
Egg Laying ◽  
Null Alleles ◽  
Wild Type ◽  
Nematode Caenorhabditis Elegans ◽  
Genetic Manipulations ◽  
Wild Type Phenotype ◽  
Toxic Product ◽  
Extragenic Suppressors ◽  
Regulatory Functions

ABSTRACT The uncoordinated, egg-laying-defective mutation, unc-93(e1500) III, of the nematode Caenorhabditis elegans spontaneously reverts to a wild-type phenotype. We describe 102 spontaneous and mutagen-induced revertants that define three loci, two extragenic (sup-9 II and sup-10 X) and one intragenic. Genetic analysis suggests that e1500 is a rare visible allele that generates a toxic product and that intragenic reversion, resulting from the generation of null alleles of the unc-93 gene, eliminates the toxic product. We propose that the genetic properties of the unc-93 locus, including the spontaneous reversion of the e1500 mutation, indicate that unc-93 may be a member of a multigene family. The extragenic suppressors also appear to arise as the result of elimination of gene activity; these genes may encode regulatory functions or products that interact with the unc-93 gene product. Genes such as unc-93, sup-9 and sup-10 may be useful for genetic manipulations, including the generation of deficiencies and mutagen testing.

scholarly journals GENE INTERACTIONS AFFECTING MUSCLE ORGANIZATION IN CAENORHABDITIS ELEGANS

Genetics ◽  
1985 ◽  
Vol 110 (3) ◽  
pp. 421-440
Author(s):  
Susan J Brown ◽  
Donald L Riddle
Keyword(s):  
Caenorhabditis Elegans ◽  
Direct Effect ◽  
Double Mutant ◽  
Suppressor Gene ◽  
Null Alleles ◽  
Gene Interactions ◽  
Wild Type ◽  
Recessive Mutations ◽  
New Gene ◽  
New Alleles

ABSTRACT Revertants of unc-15(e73)I, a paralyzed mutant with an altered muscle paramyosin, include six dominant and two recessive intragenic unc-15 revertants, two new alleles of the previously identified suppressor gene, sup-3 V, and a new suppressor designated sup-19(m210)V. The recessive intragenic unc-15 revertants exhibit novel alterations in paramyosin paracrystal structure and distribution, and these alterations are modified by interaction with unc-82(e1220)IV, another mutation that affects paramyosin. A strain containing both unc-15 and a mutation in sup-3 V that restores movement was mutagenized, and paralyzed mutants resembling unc-15 were isolated. Twenty mutations that interfere with suppression were divided into three classes (nonmuscle, sus-1, and mutations within sup-3) based on phenotype, genetic map position and dominance. The nonmuscle mutations include dumpy and uncoordinated types that have no obvious direct effect on muscle organization. Two recessive mutations define a new gene, sus-1 III. These mutations modify the unc-15(e73) phenotype to produce a severely paralyzed, dystrophic double mutant that is not suppressed by sup-3. Five semidominant, intragenic sup-3 antisuppressor mutations, one of which occurred spontaneously, restore the wild-type sup-3 phenotype of nonsuppression. However, reversion of these mutants generated no new suppressor alleles of sup-3, suggesting that the sup-3 antisuppressor alleles are not wild type but may be null alleles.

scholarly journals Stxbp1/Munc18-1 haploinsufficiency in mice recapitulates key features of STXBP1 encephalopathy and impairs cortical inhibition

2019 ◽  
Author(s):  
Wu Chen ◽  
Zhao-Lin Cai ◽  
Eugene S. Chao ◽  
Hongmei Chen ◽  
Shuang Hao ◽  
...  
Keyword(s):  
Neurodevelopmental Disorders ◽  
Neurotransmitter Release ◽  
De Novo ◽  
Synaptic Proteins ◽  
Cortical Inhibition ◽  
Null Alleles ◽  
Cortical Hyperexcitability ◽  
Genes Encoding ◽  
Key Features ◽  
Insight Into

AbstractMutations in genes encoding synaptic proteins cause many neurodevelopmental disorders, but the underlying pathogeneses are poorly understood. Syntaxin-binding protein 1 (STXBP1) is an essential component of the neurotransmitter release machinery. Its de novo heterozygous mutations are among the most frequent causes of neurodevelopmental disorders including intellectual disabilities and epilepsies. These disorders, collectively referred to as STXBP1 encephalopathy, affect a broad spectrum of neurological and neuropsychiatric features common among neurodevelopmental disorders. To gain insight into STXBP1 encephalopathy pathogenesis, we generated new Stxbp1 null alleles in mice and found that Stxbp1 haploinsufficiency impaired cognitive, psychiatric, and motor functions and caused cortical hyperexcitability and seizures. Surprisingly, Stxbp1 haploinsufficiency reduced neurotransmission from cortical parvalbumin- and somatostatin-expressing GABAergic interneurons by differentially decreasing the synaptic strength and connectivity, respectively. These results demonstrate that Stxbp1 haploinsufficient mice recapitulate key features of STXBP1 encephalopathy and indicate that inhibitory dysfunction is likely a key contributor to the disease pathogenesis.

Three Mutants That Extend Both Mean and Maximum Life Span of the Nematode, Caenorhabditis elegans , Define the age-1 Gene

2002 ◽  
Vol 2002 (38) ◽  
Author(s):  
David B. Friedman ◽  
Thomas E. Johnson
Keyword(s):  
Caenorhabditis Elegans ◽  
Life Span ◽  
Pleiotropic Effect ◽  
Wild Type ◽  
Nematode Caenorhabditis Elegans ◽  
Maximum Life Span ◽  
Gerontological Society ◽  
Recessive Mutations ◽  
Mutant Strains ◽  
Independent Mutation

Long-lived mutants in the nematode Caenorhabditis elegans have been studied to determine if the mutations responsible for extended life were allelic. Three of four mutant strains studied (MK31, MK542, MK546) contain recessive mutations that significantly lengthen life; MK542 and MK546 consistently fail to complement the long life phenotype of age-1 and are therefore allelic. MK31, although longer lived than wild type, is equivocal, in some cases failing to complement age-1 but not in others. All three long-lived strains have reduced hermaphrodite self-fertility and also fail to complement for this presumed pleiotropic effect of the age-1 mutation. Each of these three strains also contains an independent mutation at unc-31 IV. Since the mutants were isolated in the same mutant hunt (Klass, 1983) using protocols that did not guarantee independence, the mutations cannot be assumed to be independently isolated. Copyright (c) The Gerontological Society of America. Reproduced by permission of the publisher. David B. Friedman, Thomas E. Johnson, Three Mutants That Extend Both Mean and Maximum Life Span of the Nematode, Caenorhabditis elegans , Define the age-1 Gene. J. Gerontol. 43 , B102-B109 (1988).

scholarly journals Caenorhabditis elegans lin-13, a Member of the LIN-35 Rb Class of Genes Involved in Vulval Development, Encodes a Protein With Zinc Fingers and an LXCXE Motif

Genetics ◽  
2000 ◽  
Vol 155 (3) ◽  
pp. 1127-1137 ◽  
Author(s):  
Alicia Meléndez ◽  
Iva Greenwald
Keyword(s):  
Caenorhabditis Elegans ◽  
Zinc Fingers ◽  
Null Alleles ◽  
Temperature Sensitive ◽  
Wild Type ◽  
Vulval Development ◽  
Vulval Precursor Cells ◽  
Class B ◽  
Genes Encoding ◽  
Lxcxe Motif

Abstract The SynMuv genes appear to be involved in providing a signal that inhibits vulval precursor cells from adopting vulval fates in Caenorhabditis elegans. One group of SynMuv genes, termed class B, includes genes encoding proteins related to the tumor suppressor Rb and RbAp48, a protein that binds Rb. Here, we provide genetic evidence that lin-13 behaves as a class B SynMuv gene. We show that null alleles of lin-13 are temperature sensitive and maternally rescued, resulting in phenotypes ranging in severity from L2 arrest (when both maternal and zygotic activities are removed at 25°), to sterile Multivulva (when only zygotic activity is removed at 25°), to sterile non-Multivulva (when both maternal and zygotic activities are removed at 15°), to wild-type/class B SynMuv (when only zygotic activity is removed at 15°). We also show that LIN-13 is a nuclear protein that contains multiple zinc fingers and a motif, LXCXE, that has been implicated in Rb binding. These results together suggest a role for LIN-13 in Rb-mediated repression of vulval fates.

scholarly journals Prolyl 4-Hydroxylase Is an Essential Procollagen-Modifying Enzyme Required for Exoskeleton Formation and the Maintenance of Body Shape in the Nematode Caenorhabditis elegans

2000 ◽  
Vol 20 (11) ◽  
pp. 4084-4093 ◽  
Author(s):  
Alan D. Winter ◽  
Antony P. Page
Keyword(s):  
Extracellular Matrix ◽  
Caenorhabditis Elegans ◽  
Collagen Synthesis ◽  
Null Alleles ◽  
Β Subunit ◽  
Α Subunit ◽  
C Elegans ◽  
Link Type ◽  
Genes Encoding

ABSTRACT The multienzyme complex prolyl 4-hydroxylase catalyzes the hydroxylation of proline residues and acts as a chaperone during collagen synthesis in multicellular organisms. The β subunit of this complex is identical to protein disulfide isomerase (PDI). The free-living nematode Caenorhabditis elegans is encased in a collagenous exoskeleton and represents an excellent model for the study of collagen biosynthesis and extracellular matrix formation. In this study, we examined prolyl 4-hydroxylase α-subunit (PHY; EC1.14.11.2 )- and β-subunit (PDI; EC 5.3.4.1 )-encoding genes with respect to their role in collagen modification and formation of theC. elegans exoskeleton. We identified genes encoding two PHYs and a single associated PDI and showed that all three are expressed in collagen-synthesizing ectodermal cells at times of maximal collagen synthesis. Disruption of the pdi gene via RNA interference resulted in embryonic lethality. Similarly, the combinedphy genes are required for embryonic development. Interference with phy-1 resulted in a morphologically dumpy phenotype, which we determined to be identical to the uncharacterizeddpy-18 locus. Two dpy-18 mutant strains were shown to have null alleles for phy-1 and to have a reduced hydroxyproline content in their exoskeleton collagens. This study demonstrates in vivo that this enzyme complex plays a central role in extracellular matrix formation and is essential for normal metazoan development.

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