scholarly journals GENETIC ORGANIZATION OF THE REGION AROUND UNC-15 (I), A GENE AFFECTING PARAMYOSIN IN CAENORHABDITIS ELEGANS

Genetics ◽  
1980 ◽  
Vol 96 (3) ◽  
pp. 639-648 ◽  
Author(s):  
A M Rose ◽  
D L Baillie
Keyword(s):  
Fine Structure ◽  
Caenorhabditis Elegans ◽  
Muscle Protein ◽  
Average Distance ◽  
Unit Interval ◽  
Essential Genes ◽  
Induced Mutations ◽  
Nematode Caenorhabditis Elegans ◽  
Biochemical Studies ◽  
Complementation Groups

ABSTRACT In the nematode Caenorhabditis elegans mutants in the gene unc-15 (I) affect the muscle protein paramyosin (Waterston, Fishpool and Brenner 1977). We have characterized 20 ethyl methanesulfonate-induced mutations in essential genes closely linked to unc-15. These lethals defined 16 new complementation groups. In the 0.65 map-unit interval around unc-15 defined by dpy-14 and unc-56, seven newly identified genes have been mapped relative to five existing genes. At present, the average distance between genes in this region is approximately 0.05 map units. Two genes, unc-15 and unc-13, are only 0.025 map units apart. Partial fine-structure maps of alleles of these two genes have been constructed. This analysis of unc-15 and genes adjacent to it is the first in a series of genetic and biochemical studies directed towards understanding the control of unc-15 expression.

scholarly journals Genetic organization of the unc-60 region in Caenorhabditis elegans.

Genetics ◽  
1988 ◽  
Vol 118 (1) ◽  
pp. 49-59
Author(s):  
K S McKim ◽  
M F Heschl ◽  
R E Rosenbluth ◽  
D L Baillie
Keyword(s):  
Caenorhabditis Elegans ◽  
Linkage Group ◽  
Gene Order ◽  
Chromosomal Region ◽  
Essential Genes ◽  
Ethyl Methanesulfonate ◽  
Induced Mutations ◽  
Nematode Caenorhabditis Elegans ◽  
Genetic Organization ◽  
Muscle Structure

Abstract We have investigated the chromosomal region around unc-60 V, a gene affecting muscle structure, in the nematode Caenorhabditis elegans. The region studied covers 3 map units and lies at the left end of linkage group (LG) V. Compared to the region around dpy-11 (at the center of LGV), the unc-60 region has relatively few visible genes per map unit. We found the same to be true for essential genes. By screening simultaneously for recessive lethals closely linked to either dpy-11 or unc-60, we recovered ethyl methanesulfonate-induced mutations in 10 essential genes near dpy-11 but in only two genes near unc-60. Four deficiency breakpoints were mapped to the unc-60 region. Using recombination and deficiency mapping we established the following gene order: let-336, unc-34, let-326, unc-60, emb-29, let-426. Regarding unc-60 itself, we compared the effect of ten alleles (including five isolated during this study) on hermaphrodite mobility and fecundity. We used intragenic mapping to position eight of these alleles. The results show that these alleles are not distributed uniformly within the gene, but map to two groups approximately 0.012 map unit apart.

scholarly journals Genetic analysis of a large autosomal region in Caenorhabditis elegans by the use of a free duplication

1987 ◽  
Vol 49 (3) ◽  
pp. 207-213 ◽  
Author(s):  
A. M. Howell ◽  
S. G. Gilmour ◽  
R. A. Mancebo ◽  
A. M. Rose
Keyword(s):  
Caenorhabditis Elegans ◽  
Gamma Radiation ◽  
Essential Gene ◽  
Single Gene ◽  
Gene Mutations ◽  
Essential Genes ◽  
Induced Mutations ◽  
Lethal Mutations ◽  
Autosomal Region ◽  
Complementation Groups

SummaryIn this paper we describe the use of a free duplication, sDp2 (I;f), for the recovery, maintenance, and analysis of mutations defining essential genes in the left third of Linkage Group I of Caenorhabditis elegans. The lethals were induced in a strain of genotype (sDp2) + /dpy-5 + unc-13/ dpy-5 unc-15 +, using either 12 mM ethylmethane sulphonate or 1500 r of gamma radiation. Lethal mutations linked to the dpy-5 unc-13 chromosome were recognized by the absence of Dpy-5 Unc-13 individuals amongst the self progeny and were maintained by isolating Unc-13 hermaphrodites. These strains – which have two mutant alleles of the essential gene and a wild-type allele on the duplication – are balanced, since crossing-over does not occur between sDp2 and the normal homologues. Using this sytem we have recovered 58 EMS-induced mutations. These have been characterized with regard to map position and complementation. Twenty-nine of the EMS-induced mutations lie to the left of dpy-5 and define 20 complementation groups; 3 were inseparable from dpy-5 and define 3 complementation groups; 21 were to the right and define 17 complementation groups. Among a set of 29 gamma radiation-induced lethal mutations, 17 appear to be single gene mutations or are very small deletions. We estimate that we have identified from one-sixth to one-half of the essential genes in the sDp2 region.

scholarly journals ESSENTIAL GENES AND DEFICIENCIES IN THE UNC-22 IV REGION OF CAENORHABDITIS ELEGANS

Genetics ◽  
1982 ◽  
Vol 102 (4) ◽  
pp. 725-736
Author(s):  
Teresa M Rogalski ◽  
Donald G Moerman ◽  
David L Baillie
Keyword(s):  
Caenorhabditis Elegans ◽  
Unit Interval ◽  
Essential Genes ◽  
The Other ◽  
Nematode Caenorhabditis Elegans ◽  
Muscle Structure ◽  
Lethal Mutations ◽  
Recombination Mapping ◽  
Wide Range ◽  
The Right

ABSTRACT Five formaldehyde-induced deficiencies that uncover unc-22 IV, a gene affecting muscle structure in the nematode Caenorhabditis elegans were isolated and positioned. The largest deficiency, sDf2, extends in both directions from unc-22 and is approximately 1.0-2.0 map units in length. The other four deficiencies, sDf7, sDf8, sDf9 and sDf10, are all smaller than sDf2 and are located within the region uncovered by this deficiency. Thirty-seven ethyl methanesulfonate-induced lethal and sterile mutations linked to unc-22 were isolated and tested for complementation with sDf2. Nineteen lethal mutations failed to complement sDf2. Sixteen of these were further positioned by recombination mapping and also by deficiency mapping with sDf7, sDf8, sDf9 and sDf10. These sixteen mutations define 11 new essential genes in this region. Eight of the genes lie in a 0.9-map unit interval to the left of unc-22, whereas the three remaining genes lie in a region of about 0.2 map units to the right of unc-22. We believe that two of the essential genes identified in this study, let-56 and let-52, are the adjacent genes on either side of unc-22. The lethal mutations exhibit a wide range of terminal phenotypes: from first stage larva to sterile adult.

scholarly journals The unc-22(IV) region of Caenorhabditis elegans: genetic analysis of lethal mutations.

Genetics ◽  
1988 ◽  
Vol 119 (2) ◽  
pp. 345-353
Author(s):  
D V Clark ◽  
T M Rogalski ◽  
L M Donati ◽  
D L Baillie
Keyword(s):  
Caenorhabditis Elegans ◽  
Linkage Group ◽  
Essential Gene ◽  
Group Iv ◽  
Essential Genes ◽  
Ems Mutagenesis ◽  
Lethal Mutations ◽  
Complementation Groups ◽  
Minimum Estimate ◽  
Caenorhabditis Elegans Genome

Abstract The organization of essential genes in the unc-22 region, defined by the deficiency sDf2 on linkage group IV, has been studied. Using the balancer nT1 (IV;V), which suppresses recombination over 49 map units, 294 lethal mutations on LGIV(right) and LGV(left) were recovered using EMS mutagenesis. Twenty-six of these mutations fell into the unc-22 region. Together with previously isolated lethal mutations, there is now a total of 63 lethal mutations which fall into 31 complementation groups. Mutations were positioned on the map using eight overlapping deficiencies in addition to sDf2. The lethal alleles and deficiencies in the unc-22 region were characterized with respect to their terminal phenotypes. Mapping of these lethal mutations shows that sDf2 deletes a minimum of 1.8 map units and a maximum of 2.5 map units. A minimum estimate of essential gene number for the region using a truncated Poisson calculation is 48. The data indicate a minimum estimate of approximately 3500 essential genes in the Caenorhabditis elegans genome.

Viable maternal-effect mutations that affect the development of the nematode Caenorhabditis elegans.

Genetics ◽  
1995 ◽  
Vol 141 (4) ◽  
pp. 1351-1364 ◽  
Author(s):  
S Hekimi ◽  
P Boutis ◽  
B Lakowski
Keyword(s):  
Quantitative Analysis ◽  
Caenorhabditis Elegans ◽  
Maternal Effect ◽  
Genetic Screen ◽  
Phenotypic Characterization ◽  
Nematode Caenorhabditis Elegans ◽  
Critical Function ◽  
Complementation Groups

Abstract We carried out a genetic screen for viable maternal-effect mutants to identify genes with a critical function relatively early in development. This type of mutation would not have been identified readily in previous screens for viable mutants and therefore could define previously unidentified genes. We screened 30,000 genomes and identified 41 mutations falling into 24 complementation groups. We genetically mapped these 24 loci; only two of them appear to correspond to previously identified genes. We present a partial phenotypic characterization of the mutants and a quantitative analysis of the degree to which they can be maternally or zygotically rescued.

An alternative interpretation of the fine structure of the basal zone of the cuticle of the dauerlarva of the nematode Caenorhabditis elegans (Nematoda)

1978 ◽  
Vol 56 (7) ◽  
pp. 1556-1563 ◽  
Author(s):  
J. D. Popham ◽  
J. M. Webster
Keyword(s):  
Fine Structure ◽  
Caenorhabditis Elegans ◽  
Alternative Interpretation ◽  
The Other ◽  
Nematode Caenorhabditis Elegans ◽  
Basal Zone

The fine structure of the basal zone of the cuticle of the dauerlarva of Caenorhabditis elegans was examined in order to help resolve controversies regarding its structure. The results show that the striated layer in the basal zone consists of two sets of laminae oriented at right angles to each other. One set of laminae consists of longitudinally oriented, alternately thick and thin, osmiophilic strips with the distance between similar strips measuring 19 nm. The other set of laminae consists only of thick strips spaced about 14.5 nm apart which are oriented circumferentially about the larva. It is speculated that the striated layer of the basal zone of the cuticle consists of blocks of protein separated by this apparent network of interconnecting osmiophilic laminae.

Dominance and Overdominance of Mildly Deleterious Induced Mutations for Fitness Traits inCaenorhabditis elegans

Genetics ◽  
2003 ◽  
Vol 165 (2) ◽  
pp. 589-599 ◽  
Author(s):  
A D Peters ◽  
D L Halligan ◽  
M C Whitlock ◽  
P D Keightley
Keyword(s):  
Caenorhabditis Elegans ◽  
Relative Fitness ◽  
Heterozygous State ◽  
Deleterious Mutations ◽  
Wild Type ◽  
Induced Mutations ◽  
Homozygous State ◽  
Nematode Caenorhabditis Elegans ◽  
Fitness Components ◽  
Fitness Traits

AbstractWe estimated the average dominance coefficient of mildly deleterious mutations (h, the proportion by which mutations in the heterozygous state reduce fitness components relative to those in the homozygous state) in the nematode Caenorhabditis elegans. From 56 worm lines that carry mutations induced by the point mutagen ethyl methanesulfonate (EMS), we selected 19 lines that are relatively high in fitness and estimated the viabilities, productivities, and relative fitnesses of heterozygotes and homozygotes compared to the ancestral wild type. There was very little effect of homozygous or heterozygous mutations on egg-to-adult viability. For productivity and relative fitness, we found that the average dominance coefficient, h, was ∼0.1, suggesting that mildly deleterious mutations are on average partially recessive. These estimates were not significantly different from zero (complete recessivity) but were significantly different from 0.5 (additivity). In addition, there was a significant amount of variation in h among lines, and analysis of average dominance coefficients of individual lines suggested that several lines showed overdominance for fitness. Further investigation of two of these lines partially confirmed this finding.

scholarly journals MUTATIONS CAUSING TRANSFORMATION OF SEXUAL PHENOTYPE IN THE NEMATODE CAENORHABDITIS ELEGANS

Genetics ◽  
1977 ◽  
Vol 86 (2) ◽  
pp. 275-287 ◽  
Author(s):  
Jonathan A Hodgkin ◽  
Sydney Brenner
Keyword(s):  
Caenorhabditis Elegans ◽  
Nematode Caenorhabditis Elegans ◽  
Male Development ◽  
Sexual Phenotype ◽  
Male Phenotype ◽  
Complementation Groups ◽  
The One ◽  
Fertile Male ◽  
Complete Transformation

ABSTRACT Ten mutations are described that transform genotypic hermaphrodites of the nematode Caenorhabditis elegans into phenotypic males. These fall into three autosomal complementation groups, termed tra-1, tra-2, and tra-3. Two alleles of tra-1 produce almost complete transformation, to a fertile male phenotype; such transformed animals are useful for analyzing sex-linked genes. All alleles of tra-1 and tra-2 are recessive; the one known allele of tra-3 is both recessive and maternal in effect. Where tested, both XX and XXX hermaphrodites are transformed into males, but XO males (true males) are unaffected by these mutations. It is suggested that these genes are actually involved in hermaphrodite development and have no role in male development.

scholarly journals Suppressors of the organ-specific differentiation gene pha-1 of Caenorhabditis elegans.

Genetics ◽  
1991 ◽  
Vol 129 (1) ◽  
pp. 69-77 ◽  
Author(s):  
H Schnabel ◽  
G Bauer ◽  
R Schnabel
Keyword(s):  
Caenorhabditis Elegans ◽  
Temperature Sensitive ◽  
Lethal Gene ◽  
Wild Type ◽  
Nematode Caenorhabditis Elegans ◽  
X Ray ◽  
Organ Specific ◽  
Complementation Groups ◽  
Differentiation Gene ◽  
Two Temperature

Abstract The embryonic lethal gene pha-1 of the nematode Caenorhabditis elegans is required for late differentiation and morphogenesis of the pharynx in the developing embryo. Revertants of two temperature-sensitive alleles of pha-1 were isolated with the aim of obtaining mutations in genes that interact with pha-1. By various methods of mutagenesis, chemical, X-ray, transposon, or by spontaneous reversion, 220 recessive revertants were obtained, defining three complementation groups. The largest, sup-35 on linkage group (LG) III, maps close to but is separable from pha-1. This suppressor can exert its effect either maternally or zygotically to allow survival of pha-1(ts) embryos. The other two, sup-36 and sup-37, are required zygotically and map on LGIV and LGV, respectively. We have not noted a phenotype distinguishing any of the suppressors from wild type except for suppression of pha-1. That suppression is the null phenotype of at least sup-35 is indicated by the high frequency of mutation and by the fact that heterozygotes carrying sup-35 and a deficiency spanning the locus are also able to suppress. Five spontaneous mutations in sup-35 were found to be associated with recombination.

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