scholarly journals Complete Genome Sequence of Strain WHRI 3811 Race 1 of Xanthomonas campestris pv. campestris, the Causal Agent of Black Rot of Cruciferous Vegetables

2019 ◽  
Vol 32 (12) ◽  
pp. 1571-1573
Author(s):  
Congcong Kong ◽  
Vânia Horta de Passo ◽  
Zhiyuan Fang ◽  
Limei Yang ◽  
Mu Zhuang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Single Molecule ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Xanthomonas Campestris ◽  
Bacterial Pathogen ◽  
Black Rot ◽  
Cruciferous Vegetables ◽  
Race 1 ◽  
Xanthomonas Campestris Pv Campestris

Xanthomonas campestris pv. campestris is an important bacterial pathogen that causes black rot and brings about enormous production loss for cruciferous vegetables worldwide. Currently, genome sequences for only a few X. campestris pv. campestris isolates are available, most of which are draft sequences. Based on the next-generation sequencing and single-molecule sequencing in real time technologies, we present here the complete genome sequence of strain WHRI 3811 race 1 of X. campestris pv. campestris, which is a type strain that has been extensively used. The genome data will contribute to our understanding of X. campestris pv. campestris genomic features and pave the way for research on X. campestris pv. campestris–host interactions.

scholarly journals Complete and Assembled Genome Sequence of Lactobacillus plantarum RI-113 Isolated from Salami

2017 ◽  
Vol 5 (16) ◽  
Author(s):  
Raffael C. Inglin ◽  
Leo Meile ◽  
Jochen Klumpp ◽  
Marc J. A. Stevens
Keyword(s):  
Real Time ◽  
Lactobacillus Plantarum ◽  
Genome Sequence ◽  
Single Molecule ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Content Type

ABSTRACT We present here the complete genome sequence of Lactobacillus plantarum RI-113, a strain isolated from salami, which was determined using single-molecule real-time sequencing.

scholarly journals Complete Genome Sequence of Xanthomonas campestris pv. viticola Strain CCRMXCV 80 from Brazil

2017 ◽  
Vol 5 (46) ◽  
Author(s):  
Nelson B. Lima ◽  
Marco A. S. Gama ◽  
Rosa L. R. Mariano ◽  
Wilson J. Silva ◽  
Antônio R. G. Farias ◽  
...  
Keyword(s):  
Comparative Genomics ◽  
Vitis Vinifera ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Xanthomonas Campestris ◽  
Plant Protection ◽  
Bacterial Canker ◽  
Content Type ◽  
Genome Data

ABSTRACT Here, we report the complete 5.3-Mb genome sequence of Xanthomonas campestris pv. viticola (CCRMXCV 80), which causes grapevine (Vitis vinifera L.) bacterial canker. Genome data will improve our understanding of the strain’s comparative genomics and epidemiology, and help to further define plant protection and quarantine procedures.

scholarly journals Complete Genome Sequence of Mycobacterium avium , Isolated from Commercial Domestic Pekin Ducks ( Anas platyrhynchos domestica ), Determined Using PacBio Single-Molecule Real-Time Technology

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Xiao-Heng Song ◽  
Hong-Xi Chen ◽  
Wang-Shu Zhou ◽  
Jiang-Bo Wang ◽  
Ma-Feng Liu ◽  
...  
Keyword(s):  
Real Time ◽  
Genome Sequence ◽  
Mycobacterium Avium ◽  
Single Molecule ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virulent Strain ◽  
Domestic Ducks ◽  
Pekin Ducks ◽  
First Time

Mycobacterium avium is an important pathogenic bacterium in birds and has never, to our knowledge, reported to be isolated from domestic ducks. We present here the complete genome sequence of a virulent strain of Mycobacterium avium , isolated from domestic Pekin ducks for the first time, which was determined by PacBio single-molecule real-time technology.

scholarly journals Draft Genome Sequence of “Candidatus Spirobacillus cienkowskii,” a Pathogen of Freshwater Daphnia Species, Reconstructed from Hemolymph Metagenomic Reads

2018 ◽  
Vol 7 (22) ◽  
Author(s):  
Luana Bresciani ◽  
Leandro N. Lemos ◽  
Nina Wale ◽  
Jonathan Y. Lin ◽  
Alexander T. Strauss ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Draft Genome ◽  
Gc Content ◽  
Bacterial Pathogen ◽  
Bacterial Motility ◽  
Draft Genome Sequence ◽  
Daphnia Species ◽  
Red Color

We report here the near-complete genome sequence of “Candidatus Spirobacillus cienkowskii,” a spiral-shaped, red-pigmented uncultivated bacterial pathogen of Daphnia spp. The genome is 2.74 Mbp in size, has a GC content of 32.1%, and contains genes associated with bacterial motility and the production of carotenoids, which could explain the distinctive red color of hosts infected with this pathogen.

scholarly journals Complete Genome Sequence of Citricoccus sp. Strain SGAir0253, Isolated from Indoor Air in Singapore

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Lakshmi Chandrasekaran ◽  
Daniela I. Drautz-Moses ◽  
Akira Uchida ◽  
Rikky W. Purbojati ◽  
Anthony Wong ◽  
...  
Keyword(s):  
Real Time ◽  
Genome Sequence ◽  
Single Molecule ◽  
Indoor Air ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

Citricoccus sp. strain SGAir0253 was isolated from indoor air collected in Singapore. Its genome sequence was assembled using single-molecule real-time sequencing. It comprises one chromosome of 3.32 Mb and two plasmids of 137 kb and 99 kb. The genome consists of 2,950 protein-coding genes, 49 tRNAs, and 9 rRNAs.

scholarly journals Complete Genome Sequence of the Fish PathogenFlavobacterium columnareStrain C#2

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Ryan P. Bartelme ◽  
Ryan J. Newton ◽  
Yongtao Zhu ◽  
Nan Li ◽  
Benjamin R. LaFrentz ◽  
...  
Keyword(s):  
Freshwater Fish ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Flavobacterium Columnare ◽  
Circular Chromosome ◽  
Gram Negative ◽  
Water Fish ◽  
Columnaris Disease

Flavobacterium columnareis a Gram-negative bacterial pathogen that causes columnaris disease of freshwater fish.Flavobacterium columnarestrain C#2 was isolated from a diseased warm-water fish and is typed as genomovar II. The genome consists of a single 3.33-Mb circular chromosome with 2,689 predicted coding genes.

scholarly journals Complete Genome Sequence of the Probiotic Strain Lactobacillus salivarius LPM01

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Empar Chenoll ◽  
Francisco M. Codoñer ◽  
Juan F. Martinez-Blanch ◽  
Marcelo Acevedo-Piérart ◽  
M. Loreto Ormeño ◽  
...  
Keyword(s):  
Health Status ◽  
Genome Sequence ◽  
Single Molecule ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Safety Assessment ◽  
Probiotic Strain ◽  
Lactobacillus Salivarius ◽  
Improve Health Status ◽  
Improve Health

Lactobacillus salivarius LPM01 (DSM 22150) is a probiotic strain able to improve health status in immunocompromised people. Here, we report its complete genome sequence deciphered by PacBio single-molecule real-time (SMRT) technology. Analysis of the sequence may provide insights into its functional activity and safety assessment.

scholarly journals Complete Genome Sequence of Ichthyobacterium seriolicida JBKA-6T, Isolated from Yellowtail (Seriola quinqueradiata) Affected by Bacterial Hemolytic Jaundice

2017 ◽  
Vol 5 (6) ◽  
Author(s):  
Tomokazu Takano ◽  
Yoji Nakamura ◽  
Tomomasa Matsuyama ◽  
Takamitsu Sakai ◽  
Yuya Shigenobu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Content Type ◽  
Seriola Quinqueradiata

ABSTRACT Ichthyobacterium seriolicida is a fish bacterial pathogen that causes hemolytic jaundice in farmed yellowtail in Japan. To understand more about the characteristics of this bacterium, we determined its complete genome sequence. Two hemolysin genes which may be important for its pathogenicity were identified in the I. seriolicida genome.

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