scholarly journals Genome-Wide Association Mapping of Fusarium Head Blight Resistance in Spring Wheat Lines Developed in the Pacific Northwest and CIMMYT

2017 ◽  
Vol 107 (12) ◽  
pp. 1486-1495 ◽  
Author(s):  
Rui Wang ◽  
Jianli Chen ◽  
James A. Anderson ◽  
Junli Zhang ◽  
Weidong Zhao ◽  
...  
Keyword(s):  
Fusarium Head Blight ◽  
Pacific Northwest ◽  
Spring Wheat ◽  
Genome Wide Association ◽  
Head Blight ◽  
Genome Wide ◽  
The Pacific ◽  
Fhb Resistance ◽  
Wheat Lines ◽  
Sumai 3

Fusarium head blight (FHB) is a destructive disease of wheat in humid and semihumid areas of the world. It has emerged in the Pacific Northwest (PNW) in recent years because of changing climate and crop rotation practices. Our objectives in the present study were to identify and characterize quantitative trait loci (QTL) associated with FHB resistance in spring wheat lines developed in the PNW and the International Maize and Wheat Improvement Center. In total, 170 spring wheat lines were evaluated in field and greenhouse trials in 2015 and 2016. Fourteen lines showing consistent resistance in multiple environments were identified. These lines are valuable resources in wheat variety improvement of FHB resistance because they have no Sumai 3 or Sumai 3-related background. The 170 lines were genotyped using a high-density Illumina 90K single-nucleotide polymorphisms (SNP) assay and 10 other non-SNP markers. A genome-wide association analysis was conducted with a mixed model (Q+K). Consistent, significant SNP associations with multiple traits were found on chromosomes 1B, 2B, 4B, 5A, 5B, and 6A. The locus on chromosome 5B for reduced deoxynivalenol content may be novel. The identified QTL are being validated in additional mapping studies and the identified resistant lines are being used in variety development for FHB resistance and facilitated by marker-assisted selection.

scholarly journals Effectiveness of marker-based selection for Fusarium head blight resistance in spring wheat

2011 ◽  
Vol 47 (Special Issue) ◽  
pp. S123-S129 ◽  
Author(s):  
J. Chrpová ◽  
V. Šíp ◽  
T. Sedláček ◽  
L. Štočková ◽  
O. Veškrna ◽  
...  
Keyword(s):  
Fusarium Head Blight ◽  
Spring Wheat ◽  
Recombinant Inbred Lines ◽  
Wheat Variety ◽  
Fusarium Head Blight Resistance ◽  
Head Blight ◽  
No Donor ◽  
Selection For ◽  
The Cross ◽  
Sumai 3

The effect of selection for two donor-QTL from Fusarium head blight (FHB) resistant spring wheat variety Sumai 3 on the reduction of deoxynivalenol (DON) content and FHB index was evaluated in field trials over two years (2008, 2009) following artificial inoculation with Fusarium culmorum. This study was conducted on populations of recombinant inbred lines derived from two crosses, Sumai 3/Swedget and Sumai 3/SG-S 191-01. DON content and FHB index were significantly reduced in both crosses in the genotype classes with two stacked donor QTL on chromosomes 3B and 5A in comparison to genotype classes with no donor QTL. In the cross Sumai 3/Swedget the selection for QTL alleles from 3B and 5A resulted in a 63.4% reduction in DON content, and a 51.8% reduction in the FHB index. Similarly, there was a 35.9% and 31.9% reduction, respectively, in the cross Sumai 3/SG-S 191-01. The single effect of the donor-QTL allele from 3B was significant only in the cross Sumai 3/Swedjet. The presence or absence of awns affected both DON content and FHB index in both populations, but was only significantly in the cross Sumai 3/SG-S 191-01. In this cross the effect of selection for fully awned genotypes was particularly evident on a reduction of both DON and FHB index in classes with neither donor QTL, or the 3B QTL. However, the data indicate that the “awnedness” effect on FHB resistance may be highly variable and is probably greater on reducing FHB symptoms than on DON content. The results confirmed that marker-based introgression of resistance QTLs on chromosomes 3B and 5A in traditional breeding materials can enrich populations for resistance types, but it was also shown that the effect of marker-based selection need not be large in all crosses and a similar effect can probably be reached by indirect selection for some FHB-related traits.

scholarly journals The Ability to Detoxify the Mycotoxin Deoxynivalenol Colocalizes With a Major Quantitative Trait Locus for Fusarium Head Blight Resistance in Wheat

2005 ◽  
Vol 18 (12) ◽  
pp. 1318-1324 ◽  
Author(s):  
Marc Lemmens ◽  
Uwe Scholz ◽  
Franz Berthiller ◽  
Chiara Dall'Asta ◽  
Andrea Koutnik ◽  
...  
Keyword(s):  
Quantitative Trait Locus ◽  
Fusarium Head Blight ◽  
Quantitative Trait ◽  
Fusarium Head Blight Resistance ◽  
Close Relation ◽  
Major Effect ◽  
Head Blight ◽  
Fhb Resistance ◽  
Trait Locus ◽  
Wheat Lines

We investigated the hypothesis that resistance to deoxynivalenol (DON) is a major resistance factor in the Fusarium head blight (FHB) resistance complex of wheat. Ninety-six double haploid lines from a cross between ‘CM-82036’ and ‘Remus’ were examined. The lines were tested for DON resistance after application of the toxin in the ear, and for resistances to initial infection and spread of FHB after artificial inoculation with Fusarium spp. Toxin application to flowering ears induced typical FHB symptoms. Quantitative trait locus (QTL) analyses detected one locus with a major effect on DON resistance (logarithm of odds = 53.1, R2 = 92.6). The DON resistance phenotype was closely associated with an important FHB resistance QTL, Qfhs.ndsu-3BS, which previously was identified as governing resistance to spread of symptoms in the ear. Resistance to the toxin was correlated with resistance to spread of FHB (r = 0.74, P < 0.001). In resistant wheat lines, the applied toxin was converted to DON-3-O-glucoside as the detoxification product. There was a close relation between the DON-3-glucoside/DON ratio and DON resistance in the toxintreated ears (R2 = 0.84). We conclude that resistance to DON is important in the FHB resistance complex and hypothesize that Qfhs.ndsu-3BS either encodes a DON-glucosyltransferase or regulates the expression of such an enzyme.

scholarly journals Genome-wide association mapping revealed syntenic loci QFhb-4AL and QFhb-5DL for Fusarium head blight resistance in common wheat (Triticum aestivum L.)

2019 ◽  
Author(s):  
Wenjing Hu ◽  
Derong Gao ◽  
Hongya Wu ◽  
Jian Liu ◽  
Chunmei Zhang ◽  
...  
Keyword(s):  
Genome Wide Association Study ◽  
Resistance Breeding ◽  
Snp Markers ◽  
Genome Wide Association ◽  
Type Ii ◽  
Head Blight ◽  
Genome Wide ◽  
A Genome ◽  
Fhb Resistance ◽  
Type Ii Resistance

Abstract Background: Fusarium head blight (FHB), primarily caused by Fusarium graminearum, is a major threat to wheat production and food security worldwide. Breeding stably and durably resistant cultivars is the most effective approach for managing and controlling the disease. The success of FHB resistance breeding relies on identification of an effective resistant germplasm. We performed a genome-wide association study (GWAS) using the high-density wheat 90K single nucleotide polymorphism (SNP) assays to better understand the genetic basis of FHB resistance in natural population and identify associated molecular markers. Results: The resistance to FHB fungal spread along the rachis (Type II resistance) was evaluated on 171 wheat cultivars in the 2016-2017 (abbr. as 2017) and 2017-2018 (abbr. as 2018) growing seasons. Using Illumina Infinum iSelect 90K SNP genotyping data, a genome-wide association study (GWAS) identified 26 loci (88 marker-trait associations), which explained 6.65-14.18% of the phenotypic variances. The associated loci distributed across all chromosomes except 2D, 6A, 6D and 7D, with those on chromosomes 1B, 4A, 5D and 7A being detected in both years. New loci for Type II resistance were found on syntenic genomic regions of chromsome 4AL (QFhb-4AL, 621.85-622.24 Mb) and chromosome 5DL (QFhb-5DL, 546.09-547.27 Mb) which showed high collinearity in gene content and order. SNP markers wsnp_JD_c4438_5568170 and wsnp_CAP11_c209_198467 of 5D, reported previously linked to a soil-borne wheat mosaic virus (SBWMV) resistance gene, were also associated with FHB resistance in this study. Conclusion: The syntenic FHB resistant loci and associated SNP markers identified in this study are valuable for FHB resistance breeding via marker-assisted selection.

Genome-wide association studies for Fusarium head blight resistance and it’s trade-off with grain yield in soft red winter wheat

Plant Disease ◽  
2021 ◽  
Author(s):  
Rupesh Gaire ◽  
Gina Brown-Guedira ◽  
Yanhong Dong ◽  
Herbert Ohm ◽  
Mohsen Mohammadi
Keyword(s):  
Grain Yield ◽  
Association Studies ◽  
Genome Wide Association ◽  
Genome Wide Association Studies ◽  
Head Blight ◽  
Trade Off ◽  
Soft Red Winter Wheat ◽  
Genome Wide ◽  
Fhb Resistance ◽  
Red Winter Wheat

Identification of quantitative trait loci for Fusarium head blight (FHB) resistance from different sources and pyramiding them into cultivars could provide effective protection against FHB. The objective of this study was to characterize a soft red winter wheat (SRWW) breeding population that has been subjected to intense germplasm introduction and alien introgression for FHB resistance in the past. The population was evaluated under misted FHB nurseries inoculated with Fusarium graminearum infested corn spawn for two years. Phenotypic data included disease incidence (INC), disease severity (SEV), Fusarium damaged kernels (FDK), FHB index (FHBdx), and deoxynivalenol concentration (DON). Genome-wide association studies by using 13,784 SNP markers identified twenty-five genomic regions at -logP ≥ 4.0 that were associated with five FHB-related traits. Of these 25, the marker trait associations that explained more than 5% phenotypic variation were localized on chromosomes 1A, 2B, 3B, 5A, 7A, 7B, and 7D, and from diverse sources including adapted SRWW lines such as Truman and Bess, and unadapted common wheat lines such as Ning7840 and Fundulea 201R. Furthermore, individuals with favorable alleles at the four loci Fhb1, Qfhb.nc-2B.1 (Q2B.1), Q7D.1, and Q7D.2 showed better FDK and DON scores (but not INC, SEV, and FHBdx) compared to other allelic combinations. Our data also showed while pyramiding multiple loci provides protection against FHB disease, it has significant trade-off with grain yield.

scholarly journals Genetically Engineered Resistance to Fusarium Head Blight in Wheat by Expression of Arabidopsis NPR1

2006 ◽  
Vol 19 (2) ◽  
pp. 123-129 ◽  
Author(s):  
Ragiba Makandar ◽  
Juliane S. Essig ◽  
Melissa A. Schapaugh ◽  
Harold N. Trick ◽  
Jyoti Shah
Keyword(s):  
Fusarium Head Blight ◽  
Systemic Acquired Resistance ◽  
Acquired Resistance ◽  
Genetically Engineered ◽  
Type Ii ◽  
Head Blight ◽  
Functional Analog ◽  
Fhb Resistance ◽  
High Level ◽  
Sumai 3

Fusarium head blight (FHB) is a devastating disease of wheat and barley which causes extensive losses worldwide. Monogenic, gene-for-gene resistance to FHB has not been reported. The best source of resistance to FHB is a complex, quantitative trait derived from the wheat cv. Sumai 3. Here, we show that the Arabidopsis thaliana NPR1 gene (AtNPR1), which regulates the activation of systemic acquired resistance, when expressed in the FHB-susceptible wheat cv. Bobwhite, confers a heritable, type II resistance to FHB caused by Fusarium graminearum. The heightened FHB resistance in the transgenic AtNPR1-expressing wheat is associated with the faster activation of defense response when challenged by the fungus. PR1 expression is induced rapidly to a high level in the fungus-challenged spikes of the AtNPR1-expressing wheat. Furthermore, benzothiadiazole, a functional analog of salicylic acid, induced PR1 expression faster and to a higher level in the AtNPR1-expressing wheat than in the nontransgenic plants. We suggest that FHB resistance in the AtNPR1-expressing wheat is a result of these plants being more responsive to an endogenous activator of plant defense. Our results demonstrate that NPR1 is an effective candidate for controlling FHB.

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