scholarly journals Serological, Molecular, and Pathotype Diversity of Pepper veinal mottle virus and Chili veinal mottle virus

2005 ◽  
Vol 95 (3) ◽  
pp. 227-232 ◽  
Author(s):  
Benoît Moury ◽  
Alain Palloix ◽  
Carole Caranta ◽  
Patrick Gognalons ◽  
Sylvie Souche ◽  
...  

Variability within the pepper-infecting potyviruses Pepper veinal mottle virus (PVMV) and Chili veinal mottle virus (ChiVMV) in Africa and Asia was investigated. Coat protein (CP) gene sequence diversity revealed three clades that corresponded to three geographic locations and there was no evidence of presence of the ChiVMV/Asian group in western or central Africa. These clades included closely related isolates that potentially belong to two viral species, which is consistent with current nomenclature. These clades could not be unambiguously identified with polyclonal antisera; however, reverse transcription-polymerase chain reactions allowed differentiation of the isolates into two species based on a large indel in the CP gene. PVMV and ChiVMV isolates were classified into three and two pathotypes, respectively, in relation to pepper genotypes carrying different resistance factors. Specificity of resistance only partially corresponded to molecular diversity of the isolates. Only one isolate of PVMV could infect pepper genotypes carrying the two recessive genes pvr6 and pvr2 2; however, these genotypes were not infected by PVMV in field trials in Senegal, despite a high prevalence of PVMV in the surrounding pepper plants.

Plant Disease ◽  
2001 ◽  
Vol 85 (5) ◽  
pp. 558-558 ◽  
Author(s):  
J. C. Noa-Carrazana ◽  
L. Silva-Rosales

Papaya mosaic virus (PMV) is a member of the Potexvirus group and has filamentous particles of 530 nm with a positive sense single-stranded RNA of 6.6Kb. PMV was detected in Mexico in diseased papaya plants growing alone and in mixed plantations with pumpkin. Reverse transcription polymerase chain reactions (RT-PCR) and standard double-antibody sandwich enzyme linked immunosorbent assay (DAS-ELISA) procedures were used on 45 leaf samples from single plants in seven locations in southeast Mexico (States of Yucatan, Campeche, and Quintana Roo). PCR primer design was based on a GenBank sequence with accession number D13957 (1). Amplified PCR products were cloned using a TOPO TA Cloning Kit and sequenced by the dideoxy chain termination method. Twenty-six samples tested positive for PMV using one or both detection techniques: 23 of 41 from papaya and three of four from pumpkin. The two sequences reported here, YY-15 and YY-22 (from papaya and pumpkin respectively, with accession numbers AYO17186 and AYO17187), were 1180 nucleotides long and contained a fragment of ORF3, the complete ORF4 and the putative CP gene, including the 3′ end untranslatable region. Within the CP gene sequence, the amino acid sequence derived had a similarity of 88% with that of D13957 from the GenBank. The similarity of the CP between the two Mexican isolates (from papaya and pumpkin) was 94% and would therefore represent two variants of PMV. A healthy papaya plant in the greenhouse, inoculated with tissue from an infected papaya plant from the field, tested positive for PMV in DAS-ELISA. (PVX was used as a negative control). These results confirmed the identity of the isolate as PMV. Reference: (1) T. L. Sit, M. G. AbouHaidar, and S. Holi. J. Gen. Virol. 70:2335-2331, 1989.


Plant Disease ◽  
2009 ◽  
Vol 93 (1) ◽  
pp. 107-107 ◽  
Author(s):  
Y. H. Cheng ◽  
R. Y. Wang ◽  
C. C. Chen ◽  
C. A. Chang ◽  
F.-J. Jan

In May of 2006, samples from tomato plants (Solanum lycopersicum cv. Known-you 301) exhibiting necrotic symptoms on stems, petioles, and leaves were collected from Chiayi County, Taiwan. Double-antibody sandwich-ELISAs were performed using Cucumber mosaic virus, Tomato mosaic virus, Potato virus Y, Watermelon silver mottle virus, and Chilli veinal mottle virus (ChiVMV) polyclonal antibodies. Three of eight samples reacted with antibodies against ChiVMV but not with the others. Using the potyvirus degenerate primers (Hrp 5/Pot 1) (2), an expected 1.5-kb DNA fragment including the 3′-end of the NIb gene, the complete coat protein (CP) gene, and the 3′-nontranslatable region of the virus was amplified from total RNA isolated from these three samples by reverse transcription (RT)-PCR. A homology search in GenBank indicated that the new tomato-infecting virus in Taiwan belongs to Pepper veinal mottle virus (PVMV) since they shared >90% amino acid identity in the CP gene. A virus culture (Tom1) isolated from one of the diseased tomatoes was then established in Chenopodium quinoa and Nicotiana benthamiana and the CP gene was amplified and sequenced (GenBank Accession No. EU719647). Comparisons of the 807-nt CP gene with those of five PVMV isolates available in GenBank showed 81.5 to 93.1% nucleotide and 90.0 to 97.8% amino acid identity. Tom1 induced irregular necrotic lesions on stems, petioles, and leaves of tomato while inducing only mild mottle symptoms on pepper. Serological cross reaction between ChiVMV and PVMV has been observed previously (1,3) and also found in this study. To differentiate these two potyviruses by RT-PCR, primer pair CPVMVup/dw (5′-TATTC(T/C)TCAGTGTGG(A/T/C)T(T/C)CCACCAT and 5′-(T/C)C(A/T)C(A/T)(A/T/G)(A/T)AA(A/G)CCATAA(A/C)(A/C)ATA(A/G)T(T/C)T) was designed on the basis of the comparison of the CP gene and the 3′-nontranslatable region of the PVMV and ChiVMV. DNA fragments of 171 and 259 bp are expected to be amplified from ChiVMV and PVMV, respectively, by RT-PCR with primers CPVMVup/dw. In a field survey done in 2006, samples from diseased peppers (Capsicum annuum) that reacted with the polyclonal antibodies against ChiVMV were further identified by RT-PCR with primers CPVMVup/dw, indicating that both ChiVMV and PVMV infected pepper crops (Capsicum spp.) in Taiwan. A pepper isolate (Pep1) of PVMV was obtained from Nantou County through three times of single lesion passages on C. quinoa and then propagated on N. benthamiana. The CP gene of Pep1 was amplified and sequenced (GenBank Accession No. EU719646) and found to share 99.1% nucleotide and 100% amino acid identity with that of Tom1. Pep1 caused mild mottle symptoms on leaves of both tomato and pepper. To our knowledge, this is the first report of the presence of PVMV in Taiwan as well as in East Asia. References: (1) B. Moury et al. Phytopathology 95:227, 2005. (2) S. S. Pappu et al. Plant Dis. 82:1121, 1998. (3) W. S. Tsai et al. Plant Pathol. 58:408, 2008.


Animals ◽  
2021 ◽  
Vol 11 (6) ◽  
pp. 1654
Author(s):  
Wei-Tao Chen ◽  
Chin-Ann Teng ◽  
Cheng-Hsin Shih ◽  
Wei-Hsiang Huang ◽  
Yi-Fan Jiang ◽  
...  

During the spring, an outbreak of sudden death involving 58 birds occurred in a zoo. Histopathological examinations revealed variable numbers of intracytoplasmic basophilic microorganisms in the macrophages, hepatocytes, and renal epithelium of most birds, along with occasional botryoid intracytoplasmic inclusion bodies within histiocytes in the bursa of Fabricius. Based on the results of histopathological examinations, immunohistochemical staining, transmission electron microscopy, and polymerase chain reactions, genotype B Chlamydia psittaci infection concurrent with pigeon circovirus (PiCV) was diagnosed. A retrospective survey, including two years before the outbreak and the outbreak year, of C. psittaci and PiCV infections of dead birds in the aviaries, revealed that the outbreak was an independent episode. The findings of this study indicate that concurrent infection with C. psittaci and PiCV might lead to lethal outbreaks of chlamydiosis, particularly Streptopelia orientalis. In addition, persistently monitoring both pathogens and identifying potential PiCV carriers or transmitters might also help prevent lethal disease outbreaks.


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