scholarly journals Thalassobaculum salexigens sp. nov., a new member of the family Rhodospirillaceae from the NW Mediterranean Sea, and emended description of the genus Thalassobaculum

2010 ◽  
Vol 60 (1) ◽  
pp. 209-213 ◽  
Author(s):  
Laurent Urios ◽  
Valérie Michotey ◽  
Laurent Intertaglia ◽  
Françoise Lesongeur ◽  
Philippe Lebaron
Keyword(s):  
Mediterranean Sea ◽  
Reductase Activity ◽  
Fatty Acid Content ◽  
Western Mediterranean ◽  
Rrna Gene ◽  
The North ◽  
Western Mediterranean Sea ◽  
The Family ◽  
Emended Description ◽  
Nw Mediterranean

A novel Gram-negative bacteria, named CZ41_10aT, was isolated from coastal surface waters of the north-western Mediterranean Sea. Cells were motile, pleomorphic rods, 1.6 μm long and 0.7 μm wide and formed cream colonies on marine agar medium. The G+C content of the genomic DNA was 65 mol%. Phylogenetic analysis of 16S rRNA gene sequences placed the new isolate in the genus Thalassobaculum, a member of the family Rhodospirillaceae, class Alphaproteobacteria. Unlike Thalassobaculum litoreum CL-GR58T, its closest relative, strain CZ41_10aT was unable to grow anaerobically and did not exhibit nitrate reductase activity. On the basis of DNA–DNA hybridization, fatty acid content and physiological and biochemical characteristics, this isolate represents a novel species for which the name Thalassobaculum salexigens sp. nov. is proposed. The type strain is CZ41_10aT (=DSM 19539T=CIP 109064T=MOLA 84T). An emended description of the genus Thalassobaculum is also given.

scholarly journals Leeuwenhoekiella blandensis sp. nov., a genome-sequenced marine member of the family Flavobacteriaceae

2006 ◽  
Vol 56 (7) ◽  
pp. 1489-1493 ◽  
Author(s):  
Jarone Pinhassi ◽  
John P. Bowman ◽  
Olga I. Nedashkovskaya ◽  
Itziar Lekunberri ◽  
Laura Gomez-Consarnau ◽  
...  
Keyword(s):  
Algal Blooms ◽  
Phylogenetic Analyses ◽  
Western Mediterranean ◽  
Whole Genome Sequence ◽  
Rrna Gene ◽  
The North ◽  
Western Mediterranean Sea ◽  
A Genome ◽  
The Family ◽  
Gliding Bacterium

Bacteria in the family Flavobacteriaceae are increasingly recognized to play important roles in the degradation of organic matter during and following algal blooms. A novel heterotrophic, rod-shaped, aerobic, yellow-pigmented and gliding bacterium was isolated from a seawater sample collected in the Bay of Blanes in the north-western Mediterranean Sea. Analysis of its 16S rRNA gene sequence, retrieved from the whole-genome sequence, showed that the bacterium was closely related to members of the genus Leeuwenhoekiella within the family Flavobacteriaceae, phylum Bacteroidetes. Phenotypic, genotypic, chemotaxonomic and phylogenetic analyses supported the creation of a novel species to accommodate this bacterium, for which the name Leeuwenhoekiella blandensis sp. nov. is proposed. The type strain is MED 217T (=CECT 7118T=CCUG 51940T).

scholarly journals Quantifying the Variability of Phytoplankton Blooms in the NW Mediterranean Sea with the Robust Satellite Techniques (RST)

2021 ◽  
Vol 13 (24) ◽  
pp. 5151
Author(s):  
Emanuele Ciancia ◽  
Teodosio Lacava ◽  
Nicola Pergola ◽  
Vincenzo Vellucci ◽  
David Antoine ◽  
...  
Keyword(s):  
Mediterranean Sea ◽  
Regional Scale ◽  
Western Mediterranean ◽  
Phytoplankton Blooms ◽  
Chl A ◽  
In Situ Data ◽  
The North ◽  
Western Mediterranean Sea ◽  
Nw Mediterranean

Investigating the variability of phytoplankton phenology plays a key role in regions characterized by cyclonic circulation regimes or convective events, like the north-western Mediterranean Sea (NWM). The main goal of this study is to assess the potential of the robust satellite techniques (RST) in identifying anomalous phytoplankton blooms in the NWM by using 9 years (2008–2017) of multi-sensor chlorophyll-a (chl-a) products from the CMEMS and OC-CCI datasets. Further application of the RST approach on a corresponding time-series of in situ chl-a measurements acquired at the BOUSSOLE site allows evaluation ofthe accuracy of the satellite-based change detection indices and selecting the best indicator. The OC-CCI derived chl-a anomaly index shows the best performances when compared to in situ data (R2 and RMSE of 0.75 and 0.48, respectively). Thus, it has been used to characterize an anomalous chl-a bloom that occurred in March 2012 at regional scale. Results show positive chl-a anomalies between the BOUSSOLE site and the Center of Convection Zone (CCZ) as a possible consequence of an intense convection episode that occurred in February 2012.

scholarly journals Dynamical Downscaling of ERA5 Data on the North-Western Mediterranean Sea: From Atmosphere to High-Resolution Coastal Wave Climate

2021 ◽  
Vol 9 (2) ◽  
pp. 208
Author(s):  
Valentina Vannucchi ◽  
Stefano Taddei ◽  
Valerio Capecchi ◽  
Michele Bendoni ◽  
Carlo Brandini
Keyword(s):  
Mediterranean Sea ◽  
Wind Wave ◽  
Dynamical Downscaling ◽  
Wave Climate ◽  
Western Mediterranean ◽  
Limited Area ◽  
Computational Domain ◽  
Wave Hindcast ◽  
The North ◽  
Western Mediterranean Sea

A 29-year wind/wave hindcast is produced over the Mediterranean Sea for the period 1990–2018. The dataset is obtained by downscaling the ERA5 global atmospheric reanalyses, which provide the initial and boundary conditions for a numerical chain based on limited-area weather and wave models: the BOLAM, MOLOCH and WaveWatch III (WW3) models. In the WW3 computational domain, an unstructured mesh is used. The variable resolutions reach up to 500 m along the coasts of the Ligurian and Tyrrhenian seas (Italy), the main objects of the study. The wind/wave hindcast is validated using observations from coastal weather stations and buoys. The wind validation provides velocity correlations between 0.45 and 0.76, while significant wave height correlations are much higher—between 0.89 and 0.96. The results are also compared to the original low-resolution ERA5 dataset, based on assimilated models. The comparison shows that the downscaling improves the hindcast reliability, particularly in the coastal regions, and especially with regard to wind and wave directions.

Feeding Habits of Alepocephalus Rostratus (Pisces: Alepocephalidae) in the Western Mediterranean Sea

1998 ◽  
Vol 78 (4) ◽  
pp. 1295-1306 ◽  
Author(s):  
M. Carrassón ◽  
J. Matallanas
Keyword(s):  
Mediterranean Sea ◽  
Prey Item ◽  
Narrow Range ◽  
Feeding Habits ◽  
Western Mediterranean ◽  
Western Mediterranean Sea ◽  
The Family ◽  
Different Seasons ◽  
Scarcity Of Resources ◽  
Important Fish

The present study examines the feeding habits of Alepocephalus rostratus, the only species of the family Alepocephalidae in the Mediterranean Sea and the second most important fish species, in terms of biomass, inhabiting the deep slope of the Catalan Sea. Samples were obtained at depths between 1000–2250 m. Diet was analysed for two different size-classes (immature and mature specimens) at three different bathymetric strata during two different seasons. The feeding habits of A. rostratus included a narrow range of mobile macroplanktonic organisms (e.g. Pyrosoma atlanticum and Chelophyes appendiculata) and some material of benthic origin. Pyrosoma atlanticum was the preferred prey item in spring at 1000–1425 m, being very scarce in summer at the same depth as a consequence of its scarcity in the environment during this season. There were some ontogenic differences in the diet of A. rostratus at 1425–2250 m. Adults ingested more and larger prey than juvenile specimens. The scarcity of resources below 1200–1400 m fostered a more diversified diet, as well as passive predation of sedimented material.

scholarly journals Balneola vulgaris gen. nov., sp. nov., a member of the phylum Bacteroidetes from the north-western Mediterranean Sea

2006 ◽  
Vol 56 (8) ◽  
pp. 1883-1887 ◽  
Author(s):  
Laurent Urios ◽  
Hélène Agogué ◽  
Françoise Lesongeur ◽  
Erko Stackebrandt ◽  
Philippe Lebaron
Keyword(s):  
16S Rrna ◽  
16S Rrna Gene ◽  
Mediterranean Sea ◽  
Gene Sequence ◽  
Western Mediterranean ◽  
16S Rrna Gene Sequence ◽  
Rrna Gene ◽  
Rrna Gene Sequence ◽  
Western Mediterranean Sea ◽  
North Western

A novel aerobic, Gram-negative bacterium, named 13IX/A01/164T, was isolated from surface waters in the coastal north-western Mediterranean Sea. Cells were motile, straight rods, 2.5 μm long and 0.2 μm wide, and formed orange colonies on marine agar medium. The G+C content of the genomic DNA of strain 13IX/A01/164T was 42 mol%. Phylogenetic analysis of the 16S rRNA gene sequence placed the strain in the phylum Bacteroidetes within the family Crenotrichaceae. On the basis of 16S rRNA gene sequence comparison and physiological and biochemical characteristics, this isolate represents a novel species of a new genus, for which the name Balneola vulgaris gen. nov., sp. nov. is proposed. The type strain of Balneola vulgaris is 13IX/A01/164T (=DSM 17893T=CIP 109092T=OOB 256T).

scholarly journals Further spreading of the non-indigenous bryozoan Celleporaria brunnea in the Mediterranean Sea: port to port morphological variations

2015 ◽  
Author(s):  
Jasmine Ferrario ◽  
Agnese Marchini ◽  
Martina Marić ◽  
Dan Minchin ◽  
Anna Occhipinti-Ambrogi
Keyword(s):  
Mediterranean Sea ◽  
Western Mediterranean ◽  
Indigenous Species ◽  
Large Variability ◽  
Morphometric Characters ◽  
Morphological Variations ◽  
The North ◽  
Western Mediterranean Sea ◽  
The Pacific ◽  
The Mediterranean

The Pacific cheilostome bryozoan Celleporaria brunnea (Hincks, 1884), a non-indigenous species already known for the Mediterranean Sea, was recorded in 2013-2014 from nine Italian port localities (Genoa, Santa Margherita Ligure, La Spezia, Leghorn, Viareggio, Olbia, Porto Rotondo, Porto Torres and Castelsardo) in the North-western Mediterranean Sea; in 2014 it was also found for the first time in the Adriatic Sea, in the marina “Kornati”, Biograd na Moru (Croatia). In Italy, specimens of C. brunnea were found in 44 out of 105 samples (48% from harbour sites ad 52% from marinas). These data confirm and update the distribution of C. brunnea in the Mediterranean Sea, and provide evidence that recreational boating is a vector responsible for the successful spread of this species. Previous literature data have shown the existence of differences in orifice and interzooidal avicularia length and width among different localities of the invaded range of C. brunnea. Therefore, measurements of orifice and avicularia were assessed for respectively 30 zooids and 8 to 30 interzooidal avicularia for both Italian and Croatian localities, and compared with literature data, in order to verify the existence of differences in the populations of C. brunnea that could reflect the geographic pattern of its invasion range. Our data show high variability of orifice measures among and within localities: zooids with broader than long orifice coexisted with others displaying longer than broad orifice, or similar values for both length and width. The morphological variation of C. brunnea in these localities, and above all the large variability of samples within single localities or even within colonies poses questions on the reliability of such morphometric characters for inter and intraspecific evaluations.

scholarly journals A new species of Pista Malmgren, 1866 (Polychaeta, Terebellidae) from the north-western Mediterranean Sea

ZooKeys ◽  
2019 ◽  
Vol 838 ◽  
pp. 71-84
Author(s):  
Céline Labrune ◽  
Nicolas Lavesque ◽  
Paulo Bonifácio ◽  
Pat Hutchings
Keyword(s):  
New Species ◽  
Mediterranean Sea ◽  
Anterior Part ◽  
Posterior Part ◽  
Western Mediterranean ◽  
Single Pair ◽  
The North ◽  
Western Mediterranean Sea ◽  
North Western ◽  
A New Species

A new species of Terebellidae, Pistacolinisp. n., has been identified from the harbour of Banyuls-sur-Mer, north-western Mediterranean Sea. This new species was found in very high densities, exclusively in gravelly sand deposited manually, and was not found in the original source habitat of the gravel. This species is characterized by the colour of the ventral shields with pinkish anterior part and a blood red posterior part in live specimens, a pair of unequal-sized plumose branchiae inserted on segment II and anterior thoracic neuropodia with long-handled uncini. The presence of long-handled uncini even in the smallest specimens constitutes the major difference between Pistacolinisp. n. and other Pista species with a single pair of branchiae such as P.lornensis and P.bansei.

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