scholarly journals Functional connectivity models for decoding of spatial representations from hippocampal CA1 recordings

2016 ◽  
Author(s):  
Lorenzo Posani ◽  
Simona Cocco ◽  
Karel Jezek ◽  
Rémi Monasson

AbstractHippocampus stores spatial representations, or maps, which are recalled each time a subject is placed in the corresponding environment. Across different environments of similar geometry, these representations show strong orthogonality in CA3 of hippocampus, whereas in the CA1 subfield a considerable overlap between the maps can be seen. The lower orthogonality decreases reliability of various decoders developed in an attempt to identify which of the stored maps is active at the mo-ment. Especially, the problem with decoding emerges with a need to analyze data at high temporal resolution. Here, we introduce a functional-connectivity-based de-coder, which accounts for the pairwise correlations between the spiking activities of neurons in each map and does not require any positional information, i.e. any knowledge about place fields. We first show, on recordings of hippocampal activity in constant environmental conditions, that our decoder outperforms existing decoding methods in CA1. Our decoder is then applied to data from teleportation experiments, in which an instantaneous switch between the environment identity triggers a recall of the corresponding spatial representation. We test the sensitivity of our approach on the transition dynamics between the respective memory states (maps). We find that the rate of spontaneous state shifts (flickering) after a teleportation event is increased not only within the first few seconds as already reported, but this instability is sustained across much longer (> 1 min.) periods.


2017 ◽  
Vol 43 (1) ◽  
pp. 17-33 ◽  
Author(s):  
Lorenzo Posani ◽  
Simona Cocco ◽  
Karel Ježek ◽  
Rémi Monasson


2021 ◽  
Vol 118 (15) ◽  
pp. e2014464118
Author(s):  
Jill M. Goldstein ◽  
Justine E. Cohen ◽  
Klara Mareckova ◽  
Laura Holsen ◽  
Susan Whitfield-Gabrieli ◽  
...  

Stress is associated with numerous chronic diseases, beginning in fetal development with in utero exposures (prenatal stress) impacting offspring’s risk for disorders later in life. In previous studies, we demonstrated adverse maternal in utero immune activity on sex differences in offspring neurodevelopment at age seven and adult risk for major depression and psychoses. Here, we hypothesized that in utero exposure to maternal proinflammatory cytokines has sex-dependent effects on specific brain circuitry regulating stress and immune function in the offspring that are retained across the lifespan. Using a unique prenatal cohort, we tested this hypothesis in 80 adult offspring, equally divided by sex, followed from in utero development to midlife. Functional MRI results showed that exposure to proinflammatory cytokines in utero was significantly associated with sex differences in brain activity and connectivity during response to negative stressful stimuli 45 y later. Lower maternal TNF-α levels were significantly associated with higher hypothalamic activity in both sexes and higher functional connectivity between hypothalamus and anterior cingulate only in men. Higher prenatal levels of IL-6 were significantly associated with higher hippocampal activity in women alone. When examined in relation to the anti-inflammatory effects of IL-10, the ratio TNF-α:IL-10 was associated with sex-dependent effects on hippocampal activity and functional connectivity with the hypothalamus. Collectively, results suggested that adverse levels of maternal in utero proinflammatory cytokines and the balance of pro- to anti-inflammatory cytokines impact brain development of offspring in a sexually dimorphic manner that persists across the lifespan.



2021 ◽  
Vol 12 ◽  
Author(s):  
Katharina Theresa Halicki ◽  
Moritz Ingendahl ◽  
Maren Mayer ◽  
Melvin John ◽  
Marcel Raphael Schreiner ◽  
...  

In cultures with left-right-script, agentic behavior is mentally represented as following a left-to-right trajectory, an effect referred to as the Spatial Agency Bias (SAB, Suitner and Maass, 2016). In this research, we investigated whether spatial representations of activities are universal across activities by analyzing the opposite concepts of “attack” and “defense”. Both behaviors involve similar actions (e.g., fighting) but may differ in perceived agency. Moreover “defense” is necessarily always a response to an attack and may therefore be represented by a trajectory in the opposite direction. Two studies found the classic SAB for activities representing attacking but a reduction (Study 1) and reversal (Study 2) for activities involving defense. Although the spatial representation of defense on the right was much weaker and less unequivocal than that of attack on the left, the results suggest that the spatial representations of defense and attack are located in different positions. Apparently not all actors and all activities are spatially represented on the left with a left-to-right trajectory but position and direction depend on the perceived agency. Directions for future research and applications of our findings are discussed.



2021 ◽  
Author(s):  
Kexin Chen ◽  
Alexander Johnson ◽  
Eric O. Scott ◽  
Xinyun Zou ◽  
Kenneth A. De Jong ◽  
...  


2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Donovan M. Ashby ◽  
Jeffrey LeDue ◽  
Timothy H. Murphy ◽  
Alexander McGirr

Abstract Peripheral neuropathies result in adaptation in primary sensory and other regions of cortex, and provide a framework for understanding the localized and widespread adaptations that arise from altered sensation. Mesoscale cortical imaging achieves high temporal resolution of activity using optical sensors of neuronal activity to simultaneously image across a wide expanse of cortex and capture this adaptation using sensory-evoked and spontaneous cortical activity. Saphenous nerve ligation in mouse is an animal model of peripheral neuropathy that produces hyperalgesia circumscribed to the hindlimb. We performed saphenous nerve ligation or sham, followed by mesoscale cortical imaging using voltage sensitive dye (VSD) after ten days. We utilized subcutaneous electrical stimulation at multiple stimulus intensities to characterize sensory responses after ligation or sham, and acquired spontaneous activity to characterize functional connectivity and large scale cortical network reorganization. Relative to sham animals, the primary sensory-evoked response to hindlimb stimulation in ligated animals was unaffected in magnitude at all stimulus intensities. However, we observed a diminished propagating wave of cortical activity at lower stimulus intensities in ligated animals after hindlimb, but not forelimb, sensory stimulation. We simultaneously observed a widespread decrease in cortical functional connectivity, where midline association regions appeared most affected. These results are consistent with localized and broad alterations in intracortical connections in response to a peripheral insult, with implications for novel circuit level understanding and intervention for peripheral neuropathies and other conditions affecting sensation.



2013 ◽  
Vol 30 (1) ◽  
pp. 106-136 ◽  
Author(s):  
Juan Chen ◽  
Anthony G. Cohn ◽  
Dayou Liu ◽  
Shengsheng Wang ◽  
Jihong Ouyang ◽  
...  

AbstractRepresentation and reasoning with qualitative spatial relations is an important problem in artificial intelligence and has wide applications in the fields of geographic information system, computer vision, autonomous robot navigation, natural language understanding, spatial databases and so on. The reasons for this interest in using qualitative spatial relations include cognitive comprehensibility, efficiency and computational facility. This paper summarizes progress in qualitative spatial representation by describing key calculi representing different types of spatial relationships. The paper concludes with a discussion of current research and glimpse of future work.



2015 ◽  
Vol 78 (7) ◽  
pp. 496-504 ◽  
Author(s):  
Bryon Adinoff ◽  
Hong Gu ◽  
Carmen Merrick ◽  
Meredith McHugh ◽  
Haekyung Jeon-Slaughter ◽  
...  


2020 ◽  
Author(s):  
Sachin S. Deshmukh

AbstractEntorhinal cortical projections show segregation along the transverse axis of CA1, with the medial entorhinal cortex (MEC) sending denser projections to proximal CA1 (pCA1) and the lateral entorhinal cortex (LEC) sending denser projections to distal CA1 (dCA1). Previous studies have reported functional segregation along the transverse axis of CA1 correlated with the functional differences in MEC and LEC. pCA1 shows higher spatial selectivity than dCA1 in these studies. We employ a double rotation paradigm, which creates an explicit conflict between local and global cues, to understand differential contributions of these reference frames to the spatial code in pCA1 and dCA1. We show that pCA1 and dCA1 respond differently to this local-global cue conflict. pCA1 shows incoherent response consistent with the strong conflicting inputs it receives from MEC and distal CA3 (dCA3). In contrast, dCA1 shows a more coherent rotation with global cues. In addition, pCA1 and dCA1 display comparable levels of spatial selectivity in this study. This finding differs from the previous studies, perhaps due to richer sensory information available in our behavior arena. Together these observations indicate that the functional segregation along proximodistal axis of CA1 is not merely of the amount of spatial selectivity but that of the nature of the different inputs utilized to create and anchor spatial representations.



2021 ◽  
Author(s):  
Bailee L. Malivoire

Posttraumatic stress disorder (PTSD) is associated with abnormal hippocampal activity; however, the functional connectivity (FC) of the hippocampus with other brain regions and its relations with symptoms warrants further attention. I investigated FC of the hippocampus at a subregional level in PTSD during a resting state compared to trauma exposed controls (TECs). Based on imaging literature in PTSD, I targeted the FCs of the hippocampal head and tail subregions with the amygdala, medial prefrontal cortex (mPFC), and the posterior cingulate (PCC). The PTSD group had significantly greater FC compared to the TEC group between the left hippocampal head and the right amygdala, and for the left hippocampal tail with bilateral PCC. Resting state FC predicted symptom severity at time of scan and 4-months post-scan. These results highlight abnormal illness-related FC with both the hippocampal head and tail and provide support for future investigations of imaging biomarkers predictive of disease progression.



2018 ◽  
Author(s):  
Masaaki Sato ◽  
Kotaro Mizuta ◽  
Tanvir Islam ◽  
Masako Kawano ◽  
Takashi Takekawa ◽  
...  

SummaryHippocampal CA1 neurons participate in dynamic ensemble codes for space and memory. Prominent features of the environment are represented by an increased density of place cells, but cellular principles governing the formation and plasticity of such disproportionate maps are unknown. We thus imaged experience-dependent long-term changes in spatial representations at the cellular level in the CA1 deep sublayer in mice learning to navigate in a virtual-reality environment. The maps were highly dynamic but gradually stabilized as over-representations for motivational (reward) and environmental (landmark) salience emerged in different time courses by selective consolidation of relevant spatial representations. Relocation of the reward extensively reorganized pre-formed maps by a mechanism involving rapid recruitment of cells from the previous location followed by their re-stabilization, indicating that a subset of neurons encode reward-related information. The distinct properties of these CA1 cells may provide a substrate by which salient experience forms lasting and adaptable memory traces.



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