Time Series Similarity Analysis Framework in Fresh Produce Yield Forecast Domain

Author(s):  
Fatemeh Jafari ◽  
Lobna Nassar ◽  
Fakhri Karray
2011 ◽  
Vol 5 (Suppl 2) ◽  
pp. S15 ◽  
Author(s):  
Li C Xia ◽  
Joshua A Steele ◽  
Jacob A Cram ◽  
Zoe G Cardon ◽  
Sheri L Simmons ◽  
...  

2021 ◽  
Author(s):  
Nicolas Decat ◽  
Jasmine Walter ◽  
Zhao H. Koh ◽  
Piengkwan Sribanditmongkol ◽  
Ben D. Fulcher ◽  
...  

AbstractSleep is classically measured with electrophysiological recordings, which are then scored based on guidelines tailored for the visual inspection of these recordings. As such, these rules reflect a limited range of features easily captured by the human eye and do not always reflect the physiological changes associated with sleep. Here we present a novel analysis framework that characterizes sleep using over 7700 time-series features from the hctsa software. We used clustering to categorize sleep epochs based on the similarity of their features, without relying on established scoring conventions. The resulting structure overlapped substantially with that defined by visual scoring and we report novel features that are highly discriminative of sleep stages. However, we also observed discrepancies as hctsa features unraveled distinctive properties within traditional sleep stages. Our framework lays the groundwork for a data-driven exploration of sleep and the identification of new signatures of sleep disorders and conscious sleep states.


Author(s):  
Fang Zhang ◽  
Ang Shan ◽  
Yihui Luan

Abstract In recent years, a large number of time series microbial community data has been produced in molecular biological studies, especially in metagenomics. Among the statistical methods for time series, local similarity analysis is used in a wide range of environments to capture potential local and time-shifted associations that cannot be distinguished by traditional correlation analysis. Initially, the permutation test is popularly applied to obtain the statistical significance of local similarity analysis. More recently, a theoretical method has also been developed to achieve this aim. However, all these methods require the assumption that the time series are independent and identically distributed. In this paper, we propose a new approach based on moving block bootstrap to approximate the statistical significance of local similarity scores for dependent time series. Simulations show that our method can control the type I error rate reasonably, while theoretical approximation and the permutation test perform less well. Finally, our method is applied to human and marine microbial community datasets, indicating that it can identify potential relationship among operational taxonomic units (OTUs) and significantly decrease the rate of false positives.


Sign in / Sign up

Export Citation Format

Share Document