ROVEC: Runtime Optimization of Vectorized Expression Evaluation for Column Store

Author(s):  
Meng Li ◽  
Zheyu Miao ◽  
Di Wu ◽  
Feifei Li ◽  
Sheng Wang ◽  
...  
2014 ◽  
Vol 36 (8) ◽  
pp. 1626-1635
Author(s):  
Mei WANG ◽  
Jiao-Ling ZHOU ◽  
Jia-Jin LE
Keyword(s):  

2021 ◽  
pp. 108140
Author(s):  
Chiara Caiazza ◽  
Claudio Cicconetti ◽  
Valerio Luconi ◽  
Alessio Vecchio

Biology ◽  
2021 ◽  
Vol 10 (3) ◽  
pp. 244
Author(s):  
Samanta Mecocci ◽  
Ilaria Porcellato ◽  
Federico Armando ◽  
Luca Mechelli ◽  
Chiara Brachelente ◽  
...  

Equine genital squamous cell carcinomas (egSCCs) are among the most common equine tumors after sarcoids, severely impairing animal health and welfare. Equus caballus papillomavirus type 2 (EcPV2) infection is often related to these tumors. The aim of this study was to clarify the molecular mechanisms behind egSCCs associated with EcPV2 infection, investigating receptor activator of nuclear factor-kappa B ligand (RANKL) signaling in NF-kB pathway, together with the Wnt and IL17 signaling pathways. We analyzed the innate immune response through gene expression evaluation of key cytokines and transcription factors. Moreover, Ki67 index was assessed with immunohistochemistry. EcPV2-E6 DNA was checked, and viral presence was confirmed in 21 positive out to 23 cases (91%). Oncogene expression was confirmed in 14 cases (60.8%) for E6 and in 8 (34.7%) for E2. RANKL, nuclear factor kappa-light-chain-enhancer of activated B cells (NFKB)-p50, NFKBp65, interleukin (IL)-6, IL17, IL23p19, IL8, IL12p35, IL12p40, β-catenin (BCATN1), FOS like 1 (FOSL1), and lymphoid enhancer binding factor 1 (LEF1) showed a significant upregulation in tumor samples compared to healthy tissues. Our results describe an inflammatory environment characterized by the activation of RANKL/RANK and IL17 with the relative downstream pathways, and a positive modulation of inflammatory cytokines genes such as IL6 and IL8. Moreover, the increase of BCATN1, FOSL1, and LEF1 gene expression suggests an activation of both canonical and non-canonical Wnt signaling pathway that could be critical for carcinogenesis and tumor progression.


2015 ◽  
Vol 2 (3) ◽  
pp. 147-155 ◽  
Author(s):  
Daniele Merico ◽  
Nigel Sharfe ◽  
Pingzhao Hu ◽  
Jo-Anne Herbrick ◽  
Chaim M. Roifman

Background: Combined immunodeficiency (CID) presents in infancy with severe microbial infections due to either the depletion or dysfunction of lymphocytes. Several mutated genes have been implicated in causing this condition. These encoded proteins are involved in gene recombination, signal transduction from receptors to transcription factors, or they are critical for lymphocyte development. There remain 20%–30% of patients with similar phenotypes but with no known genetic aberration. The objective of this study was to define the molecular basis of CID in a group of patients. Genotyping was performed using linkage panel chips, and the results were analyzed for parametric linkage. Whole genome sequencing was also performed. In vitro mitogen stimulation, flow cytometry, real time PCR, Western blotting, and cytokine ELISA were used to assess immunological status and signal transduction pathways. We identified a homozygous mutation in the gene for the NFκB transcription factor RelB in 3 patients who suffered repeated infection despite the presence of circulating T and B cells. This mutation introduces a premature stop, resulting in an ablation of RelB expression. Evaluation of patient immune systems revealed reduced response to mitogens and an inability to maintain an adequate antibody response to immunizations. Lack of RelB expression results in a clinical presentation of CID. Statement of novelty: We describe RelB deficiency for the first time.


Author(s):  
Tejaswini Apte ◽  
Maya Ingle ◽  
A.K. Goyal
Keyword(s):  

Author(s):  
George Chernishev ◽  
Viacheslav Galaktionov ◽  
Valentin Grigorev ◽  
Evgeniy Klyuchikov ◽  
Kirill Smirnov
Keyword(s):  

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