scholarly journals Fine‐scale spatial patterns of wildlife disease are common and understudied

2021 ◽  
Author(s):  
Gregory F Albery ◽  
Amy R Sweeny ◽  
Daniel J Becker ◽  
Shweta Bansal
2001 ◽  
Vol 268 (1468) ◽  
pp. 711-717 ◽  
Author(s):  
P. P. Pomeroy ◽  
J. Worthington Wilmer ◽  
W. Amos ◽  
S. D. Twiss

2012 ◽  
Vol 13 (1) ◽  
pp. 28 ◽  
Author(s):  
S. E. Everhart ◽  
A. Askew ◽  
L. Seymour ◽  
T. C. Glenn ◽  
H. Scherm

To better understand the fine-scale spatial dynamics of brown rot disease and corresponding fungal genotypes, we analyzed three-dimensional spatial patterns of pre-harvest fruit rot caused by Monilinia fructicola in individual peach tree canopies and developed microsatellite markers for canopy-level population genetics analyses. Using a magnetic digitizer, high-resolution maps of fruit rot development in five representative trees were generated, and M. fructicola was isolated from each affected fruit. To characterize disease aggregation, nearestneighbor distances among symptomatic fruit were calculated and compared with appropriate random simulations. Within-canopy disease aggregation correlated negatively with the number of diseased fruit per tree (r = −0.827, P = 0.0009), i.e., aggregation was greatest when the number of diseased fruit was lowest. Sixteen microsatellite primers consistently amplified polymorphic regions in a geographically diverse test population of 47 M. fructicola isolates. None of the test isolates produced identical multilocus genotypes, and the number of alleles per locus ranged from 2 to 16. We are applying these markers to determine fine-scale population structure of the pathogen within and among canopies. Accepted for publication 23 May 2012. Published 23 July 2012.


2015 ◽  
Vol 96 (6) ◽  
pp. 1194-1202 ◽  
Author(s):  
Brian Keane ◽  
Shavonne Ross ◽  
Thomas O. Crist ◽  
Nancy G. Solomon

2017 ◽  
Vol 93 (10) ◽  
Author(s):  
Jie-Liang Liang ◽  
Xiao-Jing Li ◽  
Hao-Yue Shu ◽  
Pandeng Wang ◽  
Jia-Liang Kuang ◽  
...  

2016 ◽  
Vol 74 (1) ◽  
pp. 91-101 ◽  
Author(s):  
Maria Mateo ◽  
Lionel Pawlowski ◽  
Marianne Robert

Efficiency of mixed-fisheries management and operational implementation of the ecosystem approach to fisheries management rely on the ability to understand and describe the technical and biological interactions between fleets, gears and species. The present study aims to describe fine-scale spatial patterns of the French demersal mixed fisheries in the Celtic Sea and discusses their implications in terms of management. Analysis was made by integrating vessel monitoring systems and logbook data collected between 2010 and 2012 at a 3′*3′ spatial scale through the use of principal component analysis followed by hierarchical clustering. It revealed spatial regions defined by a distinct homogeneous composition of retained catches. Each cluster was also described in terms of the fishing activity: vessel length, effort, power and gear used. The analysis revealed a complex spatial structure in the species assemblage caught and suggests that a single situation cannot describe the mixed fisheries of the Celtic Sea, but rather that there are several distinct cases of mixed fisheries. Our results also highlight the limitations of using the current level of data aggregation commonly requested in international data calls to model these fisheries and suggest that improvements should be made to ensure efficient evaluation of management options. Analyses of spatially resolved fisheries data such as the one presented here open a range of potential applications. In the context of the Common Fisheries Policy reform and the landing obligation, comparison of our results with applications of the same methodology to a subset of vulnerable species or to catches of fish below the minimum conservation reference size would help to identify the geographical areas to avoid and assess potential effort reallocation strategies based on groups of target species.


2020 ◽  
Author(s):  
Gregory F Albery ◽  
Amy R Sweeny ◽  
Daniel J Becker ◽  
Shweta Bansal

AbstractAll pathogens are heterogeneous in space, yet little is known about the prevalence and scale of this spatial variation, particularly in wild animal systems. To address this question, we conducted a broad literature search to identify datasets involving diseases of wild mammals in spatially distributed contexts. Across 31 such final datasets featuring 89 replicates and 71 host-parasite combinations, only 51% had previously been used to test spatial hypotheses. We analysed these datasets for spatial dependence within a standardised modelling framework using Bayesian linear models. We detected spatial autocorrelation in 44/89 model replicates (54%) across 21/31 datasets (68%), spread across parasites of all groups and transmission modes. Surprisingly, although larger sampling areas more easily detected spatial patterns, even some very small study areas (under 0.01km2) exhibited substantial spatial heterogeneity. Parasites of all transmission modes had easily detectable spatial patterns, implying that structured contact networks and susceptibility effects are likely as important in spatially structuring disease as are environmental drivers of transmission efficiency. Our findings imply that fine-scale spatial patterns of infection often manifest in wild animal systems, whether or not the aim of the study is to examine environmentally varying processes. Given the widespread nature of these findings, studies should more frequently record and analyse spatial data, facilitating development and testing of spatial hypotheses in disease ecology.


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