Caste‐specific gene expression underlying the differential adult brain development in the honeybee Apis mellifera

2020 ◽  
Vol 30 (1) ◽  
pp. 42-56
Author(s):  
D. E. Paula Junior ◽  
M. T. Oliveira ◽  
J. J. Bruscadin ◽  
D. G. Pinheiro ◽  
A. D. Bomtorin ◽  
...  
Keyword(s):  
Gene Expression ◽  
Apis Mellifera ◽  
Brain Development ◽  
Adult Brain ◽  
Specific Gene ◽  
Specific Gene Expression

scholarly journals Single-cell genomic atlas of great ape cerebral organoids uncovers human-specific features of brain development

2019 ◽  
Author(s):  
Sabina Kanton ◽  
Michael James Boyle ◽  
Zhisong He ◽  
Malgorzata Santel ◽  
Anne Weigert ◽  
...  
Keyword(s):  
Gene Expression ◽  
Single Cell ◽  
Expression Patterns ◽  
Adult Brain ◽  
The Other ◽  
Specific Gene ◽  
Great Ape ◽  
Specific Gene Expression ◽  
Gene Regulatory ◽  
Human Specific

ABSTRACTThe human brain has changed dramatically since humans diverged from our closest living relatives, chimpanzees and the other great apes1–5. However, the genetic and developmental programs underlying this divergence are not fully understood6–8. Here, we have analyzed stem cell-derived cerebral organoids using single-cell transcriptomics (scRNA-seq) and accessible chromatin profiling (scATAC-seq) to explore gene regulatory changes that are specific to humans. We first analyze cell composition and reconstruct differentiation trajectories over the entire course of human cerebral organoid development from pluripotency, through neuroectoderm and neuroepithelial stages, followed by divergence into neuronal fates within the dorsal and ventral forebrain, midbrain and hindbrain regions. We find that brain region composition varies in organoids from different iPSC lines, yet regional gene expression patterns are largely reproducible across individuals. We then analyze chimpanzee and macaque cerebral organoids and find that human neuronal development proceeds at a delayed pace relative to the other two primates. Through pseudotemporal alignment of differentiation paths, we identify human-specific gene expression resolved to distinct cell states along progenitor to neuron lineages in the cortex. We find that chromatin accessibility is dynamic during cortex development, and identify instances of accessibility divergence between human and chimpanzee that correlate with human-specific gene expression and genetic change. Finally, we map human-specific expression in adult prefrontal cortex using single-nucleus RNA-seq and find developmental differences that persist into adulthood, as well as cell state-specific changes that occur exclusively in the adult brain. Our data provide a temporal cell atlas of great ape forebrain development, and illuminate dynamic gene regulatory features that are unique to humans.

Quantitative PCR analysis of different splice forms of NFAT5 revealed specific gene expression in fetal and adult brain

2000 ◽  
Vol 83 (1-2) ◽  
pp. 125-127 ◽  
Author(s):  
Andreas Dalski ◽  
Hans-Joachim Wagner ◽  
Eberhard Schwinger ◽  
Christine Zühlke
Keyword(s):  
Gene Expression ◽  
Quantitative Pcr ◽  
Adult Brain ◽  
Pcr Analysis ◽  
Specific Gene ◽  
Specific Gene Expression ◽  
Splice Forms

scholarly journals An integrated analysis of cell-type specific gene expression reveals genes regulated by REVOLUTA and KANADI1 in the Arabidopsis shoot apical meristem

PLoS Genetics ◽  
2020 ◽  
Vol 16 (4) ◽  
pp. e1008661 ◽  
Author(s):  
Hasthi Ram ◽  
Sudeep Sahadevan ◽  
Nittaya Gale ◽  
Monica Pia Caggiano ◽  
Xiulian Yu ◽  
...  
Keyword(s):  
Gene Expression ◽  
Shoot Apical Meristem ◽  
Apical Meristem ◽  
Integrated Analysis ◽  
Specific Gene ◽  
Cell Type ◽  
Specific Gene Expression ◽  
Cell Type Specific

scholarly journals Role of cyclic AMP in the control of cell-specific gene expression

1993 ◽  
Vol 4 (6) ◽  
pp. 204-209 ◽  
Author(s):  
Wolfgang Schmid ◽  
Doris Nitsch ◽  
Michael Boshart ◽  
Günther Schütz
Keyword(s):  
Gene Expression ◽  
Cyclic Amp ◽  
Specific Gene ◽  
Specific Gene Expression
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