Confirmation of the association between a single nucleotide polymorphism in the porcine LDHA gene and average daily gain and correlated traits in Italian Large White pigs

2012 ◽  
Vol 43 (5) ◽  
pp. 649-650 ◽  
Author(s):  
L. Fontanesi ◽  
L. Buttazzoni ◽  
E. Scotti ◽  
V. Russo
2019 ◽  
Vol 99 (4) ◽  
pp. 914-920
Author(s):  
Meng Wang ◽  
Deli Wei ◽  
Guiling Cao ◽  
Guiyu Zhu ◽  
Yunliang Jiang

Genes that exhibit allelic expression imbalance and imprinted genes play important roles in the survival of the embryo and postnatal growth regulation. In this study, the porcine oxysterol-binding protein-related 5 (OSBPL5) gene was examined, and the 2140G>A mutation (rs318687202) was found in its coding region by a comparison of Laiwu and Landrace pigs. By allele-specific expression analysis based on a specific single-nucleotide polymorphism (SNP), the imprinting status of OSBPL5 gene in skeletal muscle from both neonate and adult pigs was determined. The results showed that the OSBPL5 was paternally imprinted in skeletal muscle from adults but biallelically expressed with predominantly maternal imprinting in neonates. The distribution of the 2140G>A SNP in four pig populations was analyzed, which showed that GG genotype was dominant in Duroc and Dapulian populations, whereas the AG genotype was dominant in Junmu-1 and Laiwu populations. Pigs with the GG genotype had significantly larger litters and greater cannon bone circumferences but a lower average daily gain than pigs with the AA genotype. In conclusion, we determined the difference in the allelic expression of OSBPL5 between adult and neonate pigs and identified an SNP in its coding region that is associated with production traits.


2019 ◽  
Vol 97 (Supplement_2) ◽  
pp. 165-165
Author(s):  
Ryan L Jeon ◽  
Austin M Putz ◽  
Michael Dyck ◽  
John C S Harding ◽  
Frederic Fortin ◽  
...  

Abstract Porcine Reproductive and Respiratory Syndrome (PRRS) is caused by a virus that poses a threat to the global swine industry, costing the U.S. industry over 664 million dollars annually. Vaccination has limited effectiveness due to the virus’ antigenic and genetic shifts. Leveraging genetics to develop more resilient swine can, however, mitigate the effects of PRRS. Previous studies identified a Single Nucleotide Polymorphism (SNP) near the GBP5 gene (WUR) that was associated with resistance and resilience to PRRS, with the G allele being favorable over A. The objective of this study was to determine whether the WUR SNP is also associated with resilience to a polymicrobial natural disease challenge. Using a continuous flow system, a new batch of 60-75 naïve Yorkshire x Landrace nursery piglets was introduced every three weeks into a natural challenge facility that was initially seeded with multiple diseases, including PRRS. Traits recorded were growth rate, feed intake, backfat, loin depth, veterinary treatments, and mortality. Pigs were genotyped using a 600K SNP chip. Data from 2133 pigs were analyzed using a univariate linear mixed model that included, pen, litter, and animal genetics as random effects and WUR genotype as a fixed effect. Frequencies were 0.85, 0.14, and 0.01 for AA, AG, and GG. The G allele was favorable for most traits, with the contrast of AA vs AG significant for average daily gain in the nursery (0.339 vs 0.365 kg/d, p = 0.013) and number of treatments (2.48 vs 2.16 over 180 days, p = 0.072). Mortality rate was 26.0% for AA and 23.8% for AG (not significantly different). In conclusion, the G allele at the WUR SNP is potentially also associated with resilience to multi-factorial disease. Funded by Genome Canada, Genome Alberta, Genome Prairie, PigGen Canada, and USDA-NIFA.


2017 ◽  
Vol 57 (6) ◽  
pp. 1014
Author(s):  
K. Ropka-Molik ◽  
E. Robert ◽  
M. Tyra ◽  
K. Piórkowska ◽  
M. Oczkowicz ◽  
...  

The calcium-activated neutral proteinase 1 (CAPN1) gene, which encodes µ-calpain, is considered to be associated with the majority of meat-quality traits. The objective of the present study was to evaluate the effect of CAPN1 polymorphism on the most important slaughter, fattening and pork-quality traits. The genotype frequency of g.1429G>A polymorphism was estimated on 860 pigs represented by five breeds (Polish Landrace, Polish Large White, Pietrain, Duroc and Pulawska). In all breeds, the most frequent were pigs with an AA genotype (60–74%), with the exception of Duroc pigs where the largest number of GG animals was observed (14%). The results showed that g.1429G>A polymorphism significantly affected the number of days on test (P ≤ 0.05) and age at slaughter (P ≤ 0.01), the weight of ham and primary cuts (P ≤ 0.05, P ≤ 0.01 respectively), loin eye area (P ≤ 0.01) and average backfat thickness (P ≤ 0.05). The g.1429G>A single-nucleotide polymorphism showed no clear influence on complex pork-quality traits. At the present stage of research, the results obtained allow for the use of g.1429G>A polymorphism in CAPN1 gene as genetic marker in pig selection to improve several slaughter or fattening traits.


2018 ◽  
Vol 98 (4) ◽  
pp. 778-786
Author(s):  
Tinghua Huang ◽  
Xiali Huang ◽  
Bomei Shi ◽  
Xiongyan Liang ◽  
Jingbo Luo ◽  
...  

Salmonella colonization often establishes carrier status in infected animals, which decreases their performance. Salmonella-carrying pigs shed large amounts of bacteria in their feces, and thus they have a negative economic impact on the swine industry. The MS4A8 gene (membrane-spanning 4-domains A8) was significantly activated, by up to 119-fold, in peripheral blood after Salmonella inoculation of pigs. The present study analyzed the correlation of peripheral blood expression level and a genetic variant of porcine MS4A8 with Salmonella-infection traits. The result indicated that MS4A8 expression levels correlated significantly with Salmonella shedding counts. Both the expression of MS4A8 and fecal shedding counts correlated with leukocytes, lymphocytes, monocytes, segmented neutrophils, and banded neutrophils. A novel single nucleotide polymorphism of porcine MS4A8 (nonsynonymous, Val > Ala) was associated with Salmonella shedding counts and average daily gain (ADG) of body weight. The TT genotype had higher fecal shedding counts, leukocyte counts, and lymphocyte counts than the TC and CC genotypes. The CC genotype had higher level of ADG than the TC and TT genotype (p < 0.05). Those results indicated that MS4A8 is intriguing and could be used as a prospective genetic marker for Salmonella susceptibility.


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