scholarly journals MoNSTR-seq, a restriction site-associated DNA sequencing technique to characterize Agrobacterium -mediated transfer-DNA insertions in Phomopsis longicolla

2017 ◽  
Vol 66 (1) ◽  
pp. 19-24 ◽  
Author(s):  
M. Zaccaron ◽  
S. Sharma ◽  
B.H. Bluhm
2011 ◽  
pp. 28-35
Author(s):  

Background: The C677T polymorphism of MTHFR gene is a risk factor of many diseases. This study is aimed at: (1) Improving a PCR-RFLP process with the own designed primers to identify the C677T polymorphism of MTHFR gene. (2) Evaluating the prevalence of the C677T polymorphism of MTHFR gene in volunteer group. Materials and method: DNA samples was extracted from peripheral blood of 60 volunteers. Designing primers by using FastPCR software, then improving PCR technique. Standardizing the optimal conditions of restriction digest by HinfI. Confirming the results of polymorphism by DNA sequencing technique. Results: We designed successfully primers to amplify fragment of MTHFR gene including C677T polymorphism and an obligatory restriction site of HinfI (as internal control). 0.5 µl of HinfI enzyme (10 U/µl) is enough for restriction digest. The MTHFR genotype frequencies were: 71.67 % (677CC); 25% (677CT); and 3.33 % (677TT). Conclusion: We standardized successfully PCR-RFLP technique to identifying C677T polymorphism of MTHFR gene. Keywords: C677T polymorphism, MTHFR gene, PCR-RFLP


PLoS ONE ◽  
2016 ◽  
Vol 11 (3) ◽  
pp. e0150692 ◽  
Author(s):  
Chunfa Tong ◽  
Huogen Li ◽  
Ying Wang ◽  
Xuran Li ◽  
Jiajia Ou ◽  
...  

2018 ◽  
Vol 18 (1) ◽  
Author(s):  
Junchi Zhu ◽  
Yinshan Guo ◽  
Kai Su ◽  
Zhendong Liu ◽  
Zhihua Ren ◽  
...  

2018 ◽  
Vol 68 (2) ◽  
pp. 187-203 ◽  
Author(s):  
Elizabeth L Spriggs ◽  
Deren A R Eaton ◽  
Patrick W Sweeney ◽  
Caroline Schlutius ◽  
Erika J Edwards ◽  
...  

2018 ◽  
Vol 138 (10) ◽  
pp. 865-870 ◽  
Author(s):  
Yanfei Wang ◽  
Yu Lu ◽  
Jing Cheng ◽  
Lei Zhang ◽  
Dongyi Han ◽  
...  

PLoS ONE ◽  
2018 ◽  
Vol 13 (8) ◽  
pp. e0201229 ◽  
Author(s):  
Ji-Hee Lee ◽  
Sathishkumar Natarajan ◽  
Manosh Kumar Biswas ◽  
Kenta Shirasawa ◽  
Sachiko Isobe ◽  
...  

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