3D Measurements of Nano-Particle Transport in Complex 2.5D Micro-Models

2015 ◽  
Author(s):  
Jagannath Upadhyay ◽  
Daniel S. Park ◽  
Karsten E. Thompson ◽  
Dimitris E. Nikitopoulos
Keyword(s):  
Particle Velocity ◽  
Particle Transport ◽  
Three Dimensional ◽  
Laser Scanning Microscopy ◽  
Nano Particles ◽  
Confocal Laser ◽  
Nano Particle ◽  
Micro Model ◽  
Micro Particle Image Velocimetry

A confocal Micro-Particle Image Velocimetry (C-μPIV) technique along with associated post image processing algorithms is established to quantify three dimensional distributions of nano-particle velocity and concentration at the micro-scale (pore-scale) in 2.5D porous media designed from a Boise rock sample. In addition, an in-situ, non-destructive method for measuring the geometry of the micro-model, including its depth, is described and demonstrated. The particle experiments use 900 nm fluorescence labeled polystyrene particles at a flow rate of 10 nLmin−1 and confocal laser scanning microscopy (CLSM), while in-situ geometry measurements use regular microscope along with Rhodamine dye and a depth-to-fluorescence-intensity calibration. Image post-processing techniques include elimination of background noise and signal from adsorbed nano-particle on the inner surfaces of the micro-model. In addition, a minimization of depth of focus technique demonstrates a capability of optically thin slice allowing us to measure depth wise velocity in 2.5D micro-model. The mean planar components of the particle velocity of the steady-state flow and particle concentration distributions were measured in three dimensions. Particle velocities range from 0.01 to 122 μm s−1 and concentrations from 2.18 × 103 to 1.79 × 104 particles mm−2. Depth-wise results show that mean velocity closer to the top wall is comparatively higher than bottom walls, because of higher planar porosity and smooth pathway for the nano-particles closer to the top wall. The three dimensional micro-model geometry reconstructed from the fluorescence data can be used to conduct numerical simulations of the flow in the as-tested micro-model for future comparisons to experimental results after incorporating particle transport and particle-wall interaction models.

Flow Visualization and 3D Measurements of Nano-Particle Transport in Rock-Based 2.5D Ceramic Micro-Models

2017 ◽  
Author(s):  
Jagannath Upadhyay ◽  
Daniel S. Park ◽  
Khurshida Sharmin ◽  
Ingmar Schoegl ◽  
Karsten E. Thompson ◽  
...  
Keyword(s):  
Porous Media ◽  
Particle Velocity ◽  
Particle Transport ◽  
Nano Particles ◽  
Reservoir Rock ◽  
Nano Particle ◽  
Micro Model ◽  
Particle Mobility ◽  
3D Measurements

Most flow visualizations and flow measurements to understand particle mobility in porous media are typically performed in transparent microfluidic devices (micro-models) with 2D pore-throat networks. Nano-particle mobility studies to date have been limited to micro-models made of transparent thermoplastic or silicone-based materials. In an effort to fabricate materials close to reservoir rock, ceramic micro-model has been designed and micro fabricated by our group to study nano-particle transport in rock-based ceramic micro-model. A Confocal Micro-Particle Image Velocimetry (C-μPIV) technique augmented with associated post processing algorithms [1] is used in obtaining 3D distributions of nano-particle velocity and concentration at selected locations of the ceramic micro-model. Furthermore, a novel in-situ, nondestructive method of measuring 3D geometry of non-transparent ceramic micro-model is described and validated. The particle experiment uses 860 nm fluorescence labeled polystyrene neutrally buoyant, and electrically neutral nano-particles. The data was acquired using confocal laser-scanning microscope to quantify 3D particle transport at selected observation locations. In addition, fluorescence microscope was used to measure in-situ geometry of porous media. Results of detailed 3D measurements of nano-particle velocity and particle concentration from experiment conducted at a constant flow rate of 30 nL/min in the rock-based micro-model are presented and discussed. Particle velocities range from 0 to 20.93 μm/sec in magnitude, and average concentration range from 6.02 × 103 to 6.79 × 103 particles at inlet channel while velocities range from 0 to 73.63 μm/sec and concentration range from 4.9 × 101 to 1.45 × 103 particles at selected observation locations of the ceramic micro-model. 3D velocity fields at selected locations also indicate that mean velocity closer to the top wall is comparatively higher than bottom wall, because of higher planar porosity and smooth pathway for the nano-particles closer to the top wall. The three dimensional micro-model geometry reconstructed from the fluorescence data can be used to conduct numerical simulations of the flow in the as-tested micro-model for future comparisons to experimental results after incorporating particle transport and particle-wall interaction models.

scholarly journals High Rates of Conjugation in Bacterial Biofilms as Determined by Quantitative In Situ Analysis

1999 ◽  
Vol 65 (8) ◽  
pp. 3710-3713 ◽  
Author(s):  
Martina Hausner ◽  
Stefan Wuertz
Keyword(s):  
Laser Scanning ◽  
Nutrient Concentration ◽  
Three Dimensional ◽  
Laser Scanning Microscopy ◽  
Confocal Laser ◽  
Bacterial Biofilms ◽  
Conjugative Gene Transfer ◽  
Biofilm Structure

ABSTRACT Quantitative in situ determination of conjugative gene transfer in defined bacterial biofilms using automated confocal laser scanning microscopy followed by three-dimensional analysis of cellular biovolumes revealed conjugation rates 1,000-fold higher than those determined by classical plating techniques. Conjugation events were not affected by nutrient concentration alone but were influenced by time and biofilm structure.

Characterization of Micro Fluidic Devices by Optical Measurements

2007 ◽  
Author(s):  
Michael Schlu¨ter ◽  
Marko Hoffmann ◽  
Norbert Ra¨biger
Keyword(s):  
Laser Scanning ◽  
Chemical Engineering ◽  
Three Dimensional ◽  
Laser Scanning Microscopy ◽  
Optical Measurements ◽  
Confocal Laser ◽  
Pressure Drops ◽  
Micro Particle Image Velocimetry ◽  
Fluidic Devices ◽  
Micro Process Engineering

Micro fluidic devices are successfully in use for several applications in chemical engineering and biotechnology. Nevertheless, there is still no breakthrough for micro process engineering because of a lack in understanding the mechanisms for local hydrodynamics and mass transfer on micro scales. Micro Particle Image Velocimetry (μ-PIV) combined with Confocal Laser Scanning Microscopy (CLSM) enables the measurement of three-dimensional flow and concentration fields in micro devices for common stationary cases. By quantitative analysis of pressure drops, mixing qualities and residence time distributions an adjustment of micro reactor devices for the demands of chemical and biochemical reactions becomes possible.

3-D imaging of cells using a confocal laser scanning microscope and digital image processing

1988 ◽  
Vol 46 ◽  
pp. 96-97
Author(s):  
Thomas M. Jovin ◽  
Michel Robert-Nicoud ◽  
Donna J. Arndt-Jovin ◽  
Thorsten Schormann
Keyword(s):  
Laser Scanning ◽  
Confocal Laser Scanning Microscope ◽  
Laser Scanning Microscopy ◽  
Confocal Laser Scanning ◽  
Confocal Laser ◽  
Scanning Microscope ◽  
Laser Scanning Microscope ◽  
Biochemical Processes ◽  
Adjacent Structures

Light microscopic techniques for visualizing biomolecules and biochemical processes in situ have become indispensable in studies concerning the structural organization of supramolecular assemblies in cells and of processes during the cell cycle, transformation, differentiation, and development. Confocal laser scanning microscopy offers a number of advantages for the in situ localization and quantitation of fluorescence labeled targets and probes: (i) rejection of interfering signals emanating from out-of-focus and adjacent structures, allowing the “optical sectioning” of the specimen and 3-D reconstruction without time consuming deconvolution; (ii) increased spatial resolution; (iii) electronic control of contrast and magnification; (iv) simultanous imaging of the specimen by optical phenomena based on incident, scattered, emitted, and transmitted light; and (v) simultanous use of different fluorescent probes and types of detectors.We currently use a confocal laser scanning microscope CLSM (Zeiss, Oberkochen) equipped with 3-laser excitation (u.v - visible) and confocal optics in the fluorescence mode, as well as a computer-controlled X-Y-Z scanning stage with 0.1 μ resolution.

scholarly journals A sample cell for the study of enzyme-induced carbonate precipitation at the grain-scale and its implications for biocementation

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Jennifer Zehner ◽  
Anja Røyne ◽  
Pawel Sikorski
Keyword(s):  
Real Time ◽  
Laser Scanning Microscopy ◽  
In Situ Monitoring ◽  
Confocal Laser ◽  
Precipitation Process ◽  
Successful Implementation ◽  
Detailed Knowledge ◽  
Carbonate Precipitation ◽  
Sample Cell

AbstractBiocementation is commonly based on microbial-induced carbonate precipitation (MICP) or enzyme-induced carbonate precipitation (EICP), where biomineralization of $$\text {CaCO}_{3}$$ CaCO 3 in a granular medium is used to produce a sustainable, consolidated porous material. The successful implementation of biocementation in large-scale applications requires detailed knowledge about the micro-scale processes of $$\text {CaCO}_{3}$$ CaCO 3 precipitation and grain consolidation. For this purpose, we present a microscopy sample cell that enables real time and in situ observations of the precipitation of $$\text {CaCO}_{3}$$ CaCO 3 in the presence of sand grains and calcite seeds. In this study, the sample cell is used in combination with confocal laser scanning microscopy (CLSM) which allows the monitoring in situ of local pH during the reaction. The sample cell can be disassembled at the end of the experiment, so that the precipitated crystals can be characterized with Raman microspectroscopy and scanning electron microscopy (SEM) without disturbing the sample. The combination of the real time and in situ monitoring of the precipitation process with the possibility to characterize the precipitated crystals without further sample processing, offers a powerful tool for knowledge-based improvements of biocementation.

scholarly journals Influence of Aging on Corrosion Behaviour of the 6061 Cast Aluminium Alloy

Materials ◽  
2021 ◽  
Vol 14 (8) ◽  
pp. 1821
Author(s):  
Ting He ◽  
Wei Shi ◽  
Song Xiang ◽  
Chaowen Huang ◽  
Ronald G. Ballinger
Keyword(s):  
Aluminium Alloy ◽  
Laser Scanning ◽  
Corrosion Behaviour ◽  
Laser Scanning Microscopy ◽  
Confocal Laser ◽  
Kelvin Probe ◽  
Force Microscopy ◽  
The Matrix ◽  
6061 Aluminium Alloy

The influence of AlFeSi and Mg2Si phases on corrosion behaviour of the cast 6061 aluminium alloy was investigated. Scanning Kelvin probe force microscopy (SKPFM), electron probe microanalysis (EPMA), and in situ observations by confocal laser scanning microscopy (CLSM) were used. It was found that Mg2Si phases were anodic relative to the matrix and dissolved preferentially without significantly affecting corrosion propagation. The AlFeSi phases’ influence on 6061 aluminium alloy local corrosion was greater than that of the Mg2Si phases. The corroded region width reached five times that of the AlFeSi phase, and the accelerating effect was terminated as the AlFeSi dissolved.

scholarly journals In Situ 3D-Imaging of the Inner Ear Synapses with a Cochlear Implant

Life ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 301
Author(s):  
Kathrin Malfeld ◽  
Nina Armbrecht ◽  
Holger A. Volk ◽  
Thomas Lenarz ◽  
Verena Scheper
Keyword(s):  
Cochlear Implant ◽  
Inner Ear ◽  
Laser Scanning ◽  
3D Imaging ◽  
Laser Scanning Microscopy ◽  
Confocal Laser ◽  
Sensory Cells ◽  
Residual Hearing ◽  
Preparation Methods

In recent years sensorineural hearing loss was found to affect not exclusively, nor at first, the sensory cells of the inner ear. The sensory cells’ synapses and subsequent neurites are initially damaged. Auditory synaptopathies also play an important role in cochlear implant (CI) care, as they can lead to a loss of physiological hearing in patients with residual hearing. These auditory synaptopathies and in general the cascades of hearing pathologies have been in the focus of research in recent years with the aim to develop more targeted and individually tailored therapeutics. In the current study, a method to examine implanted inner ears of guinea pigs was developed to examine the synapse level. For this purpose, the cochlea is made transparent and scanned with the implant in situ using confocal laser scanning microscopy. Three different preparation methods were compared to enable both an overview image of the cochlea for assessing the CI position and images of the synapses on the same specimen. The best results were achieved by dissection of the bony capsule of the cochlea.

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