scholarly journals Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Jacqueline Goordial ◽  
Isabelle Raymond-Bouchard ◽  
Robert Riley ◽  
Jennifer Ronholm ◽  
Nicole Shapiro ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Mcmurdo Dry Valleys ◽  
Draft Genome Sequence ◽  
Dry Valleys ◽  
High Quality ◽  
Cold Adapted

Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

scholarly journals Draft Genome Sequence of Paenisporosarcina sp. Strain TG-14, a Psychrophilic Bacterium Isolated from Sediment-Laden Stratified Basal Ice from Taylor Glacier, McMurdo Dry Valleys, Antarctica

2012 ◽  
Vol 194 (23) ◽  
pp. 6656-6657 ◽  
Author(s):  
Hye Yeon Koh ◽  
Sung Gu Lee ◽  
Jun Hyuck Lee ◽  
Shawn Doyle ◽  
Brent C. Christner ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Mcmurdo Dry Valleys ◽  
Draft Genome Sequence ◽  
Psychrophilic Bacterium ◽  
Dry Valleys ◽  
Adaptation Mechanism ◽  
Content Type ◽  
Basal Ice ◽  
Taylor Glacier

ABSTRACTThe psychrophilic bacteriumPaenisporosarcinasp. TG-14 was isolated from sediment-laden stratified basal ice from Taylor Glacier, McMurdo Dry Valleys, Antarctica. Here we report the draft genome sequence of this strain, which may provide useful information on the cold adaptation mechanism in extremely variable environments.

scholarly journals High quality draft genome sequence and description of Occidentia massiliensis gen. nov., sp. nov., a new member of the family Rickettsiaceae

2014 ◽  
Vol 9 (1) ◽  
Author(s):  
Oleg Mediannikov ◽  
Thi-Thien Nguyen ◽  
Lesley Bell-Sakyi ◽  
Roshan Padmanabhan ◽  
Pierre-Edouard Fournier ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
The Family

scholarly journals High-Quality Draft Genome Sequence of Biocontrol Strain Pantoea sp. OXWO6B1

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Jennifer Town ◽  
Patrice Audy ◽  
Susan M. Boyetchko ◽  
Tim J. Dumonceaux
Keyword(s):  
Phytophthora Infestans ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
Biocontrol Strain

Pantoea sp. strain OXWO6B1 inhibits the growth of the potato pathogen Phytophthora infestans . We determined the 5.2-Mbp genome sequence of this strain, which featured at least 3 confirmed plasmids of up to 250 kbp. The genome sequence of OXWO6B1 is different from that of all previously sequenced strains of Pantoea .

scholarly journals High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T)

2013 ◽  
Vol 8 (1) ◽  
pp. 37-46 ◽  
Author(s):  
Erko Stackebrandt ◽  
Olga Chertkov ◽  
Alla Lapidus ◽  
Matt Nolan ◽  
Susan Lucas ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality

scholarly journals High-Quality Draft Genome Sequence of the Multidrug-Resistant Clinical Isolate Enterococcus faecium VRE16

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Suelen Scarpa de Mello ◽  
Daria Van Tyne ◽  
Andrei Nicoli Gebieluca Dabul ◽  
Michael S. Gilmore ◽  
Ilana L. B. C. Camargo
Keyword(s):  
Antibiotic Resistance ◽  
Virulence Factors ◽  
Genome Sequence ◽  
Enterococcus Faecium ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Multidrug Resistant ◽  
Draft Genome Sequence ◽  
Commensal Bacterium ◽  
High Quality

Specific lineages of the commensal bacterium Enterococcus faecium belonging to CC17, especially ST412, have been isolated from patients in several hospitals worldwide and harbor antibiotic resistance genes and virulence factors. Here, we report a high-quality draft genome sequence and highlight features of E. faecium VRE16, a representative of this ST.

scholarly journals Genome Sequence of Clostridium botulinum Strain Adk2012 Associated with a Foodborne Botulinum Case in Tottori, Japan, in 2012

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Hiroshi Asakura ◽  
Shiori Yamamoto ◽  
Yoshika Momose ◽  
Haru Kato ◽  
Masaaki Iwaki ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Clostridium Botulinum ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Foodborne Botulism

ABSTRACT We report here a draft genome sequence of Clostridium botulinum Adk2012 responsible for a foodborne botulism case that occurred in Tottori, Japan, in 2012. Its genome size was 2,904,173 bp, with 46 rRNAs and 54 tRNAs, at a coverage of 14.5×.

scholarly journals High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym

2015 ◽  
Vol 10 (1) ◽  
Author(s):  
Wayne Reeve ◽  
John Sullivan ◽  
Clive Ronson ◽  
Rui Tian ◽  
Christine Munk ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
Mesorhizobium Loti

scholarly journals Draft Genome Sequence of a Red Basidiomycete Yeast, Symmetrospora coprosmae Strain UCD350, Isolated from Soil in Ireland

2019 ◽  
Vol 8 (44) ◽  
Author(s):  
Jameela Almasoud ◽  
Laoise McArdle ◽  
Ryan Henne ◽  
Karen Mathews ◽  
Ísla O’Connor ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Red Yeast

Symmetrospora coprosmae is a red yeast from the subphylum Pucciniomycotina in the phylum Basidiomycota. Here, we present the first genome sequence of S. coprosmae strain UCD350, from an isolate collected from soil in Ireland. The genome size is 20.2 Mb.

scholarly journals High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556T

2015 ◽  
Vol 10 (1) ◽  
Author(s):  
Sofie E. De Meyer ◽  
Rui Tian ◽  
Rekha Seshadri ◽  
Natalia Ivanova ◽  
Amrita Pati ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality
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