scholarly journals Complete Genome Sequence of Acinetobacter baumannii Strain B8342, a Motility-Positive Clinical Isolate

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
Saranya Vijaykumar ◽  
Veeraraghavan Balaji ◽  
Indranil Biswas
Keyword(s):  
Health Care ◽  
Acinetobacter Baumannii ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
De Novo ◽  
Clinical Strain ◽  
Sequencing Data ◽  
Gram Negative ◽  
Long Read ◽  
Health Care Associated Infections

Acinetobacter baumannii is an emerging Gram-negative pathogen responsible for health care–associated infections. In this study, we determined the genome of a motility-positive clinical strain, B8342, isolated from a hospital in southern India. The B8342 genome, which is 3.94 Mbp, was generated by de novo assembly of PacBio long-read sequencing data.

scholarly journals Complete Genome Sequence of Acinetobacter baumannii Strain B8300, Which Displays High Twitching Motility

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
Saranya Vijaykumar ◽  
Veeraraghavan Balaji ◽  
Indranil Biswas
Keyword(s):  
Health Care ◽  
Acinetobacter Baumannii ◽  
Complete Genome Sequence ◽  
De Novo ◽  
Clinical Strain ◽  
Twitching Motility ◽  
Nosocomial Pathogen ◽  
Sequencing Data ◽  
Long Read ◽  
Health Care Associated Infections

Acinetobacter baumannii has emerged as an important nosocomial pathogen causing health care-associated infections. In this study, we determined the genome of a twitching-positive clinical strain, B8300, isolated from a hospital in southern India. De novo assembly of PacBio long-read sequencing data generated the B8300 genome that consists of a chromosome of 3.82 Mbp and a plasmid of 25.15 kbp.

scholarly journals Complete Genome Sequence of SMBL-WEM22, a Halotolerant Strain of Kosakonia cowanii Isolated from Hong Kong Seawater

2021 ◽  
Vol 10 (41) ◽  
Author(s):  
W. E. Moore ◽  
G. K. K. Lai ◽  
S. D. J. Griffin ◽  
F. C. C. Leung
Keyword(s):  
Hong Kong ◽  
Dna Sequences ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Hybrid Assembly ◽  
Gram Negative ◽  
Content Type ◽  
Facultative Anaerobic ◽  
Long Read

Kosakonia cowanii is a Gram-negative, motile, facultative anaerobic enterobacterium that is found in soil, water, and sewage. K. cowanii SMBL-WEM22 is a halotolerant strain that was isolated from seawater in Hong Kong. The complete genome of SMBL-WEM22 (5,037,617 bp, with a GC content of 55.02%) was determined by hybrid assembly of short- and long-read DNA sequences.

scholarly journals Complete Genome Sequence of Lytic Bacteriophage LZ35 Infecting Acinetobacter baumannii Isolates

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Zhonghe Guo ◽  
Honglan Huang ◽  
Xiaolin Wu ◽  
Yuchong Hao ◽  
Yanbo Sun
Keyword(s):  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Nosocomial Infections ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Opportunistic Pathogen ◽  
Lytic Bacteriophage ◽  
Gram Negative

Acinetobacter baumannii is a Gram-negative opportunistic pathogen that is frequently associated with nosocomial infections. Bacteriophages infecting A. baumannii can be used as effective agents to control these infections. Here, we announce the complete genome sequence of the lytic bacteriophage LZ35 infecting A. baumannii isolates.

scholarly journals Complete Genome Sequence of Rubrobacter xylanophilus Strain AA3-22, Isolated from Arima Onsen in Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Natsuki Tomariguchi ◽  
Kentaro Miyazaki
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hot Spring ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

Rubrobacter xylanophilus strain AA3-22, belonging to the phylum Actinobacteria, was isolated from nonvolcanic Arima Onsen (hot spring) in Japan. Here, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase Gene bla NDM-1

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Thomas Krahn ◽  
Daniel Wibberg ◽  
Irena Maus ◽  
Anika Winkler ◽  
Patrice Nordmann ◽  
...  
Keyword(s):  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Clinical Strain ◽  
Human Pathogen ◽  
Lactamase Gene

Acinetobacter baumannii is an emerging human pathogen causing nosocomial and community-acquired infections. Here, we present the complete genome sequence of the clinical A. baumannii strain R2090 carrying the metallo-β-lactamase gene bla NDM-1 in its chromosome within the transposon Tn 125 .

scholarly journals Draft Genome Sequence of Colistin-Resistant Acinetobacter baumannii Strain VB22595 Isolated from a Central Line-Associated Bloodstream Infection

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Balaji Veeraraghavan ◽  
Shalini Anandan ◽  
Naveen Kumar Devanga Ragupathi ◽  
Saranya Vijayakumar ◽  
Dhiviya Prabaa Muthuirulandi Sethuvel ◽  
...  
Keyword(s):  
Health Care ◽  
Acinetobacter Baumannii ◽  
Draft Genome ◽  
Central Line ◽  
Multidrug Resistant ◽  
Clinical Strain ◽  
Colistin Resistance ◽  
Emerging Pathogen ◽  
A Genome ◽  
Health Care Associated Infections

Acinetobacter baumannii is an important emerging pathogen that causes health care-associated infections. In this study, we determined the genome of a multidrug-resistant clinical strain, VB22595, isolated from a hospital in Southern India. The draft genome indicates that strain VB22595 encodes a genome of ~3.92 Mb in size and does not contain plasmid derived MCR-1 for colistin resistance.

scholarly journals Complete Genome Sequence of Vibrio rotiferianus Strain AM7

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Apirak Wiseschart ◽  
Kusol Pootanakit ◽  
Kei Kitahara
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The Novel ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

ABSTRACT We isolated the novel strain Vibrio rotiferianus AM7 from the shell of an abalone. In this article, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of Staphylococcus arlettae Strain P2, Isolated from a Laboratory Environment

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Hiroki Yu ◽  
Makoto Taniguchi ◽  
Kazuma Uesaka ◽  
Apirak Wiseschart ◽  
Kusol Pootanakit ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hybrid Approach ◽  
Illumina Miseq ◽  
Sequencing Data ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

Staphylococcus arlettae is one coagulase-negative species in the bacterial genus Staphylococcus. Here, we describe the closed complete genome sequence of S. arlettae strain P2, which was obtained using a hybrid approach combining Oxford Nanopore long-read and Illumina MiSeq short-read sequencing data.

scholarly journals Closed Genome Sequence ofVibrio choleraeO1 El Tor Inaba Strain A1552

2018 ◽  
Vol 6 (9) ◽  
Author(s):  
Anna Allué-Guardia ◽  
Mylea Echazarreta ◽  
Sara S. K. Koenig ◽  
Karl E. Klose ◽  
Mark Eppinger
Keyword(s):  
Vibrio Cholerae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Clinical Strain ◽  
Human Pathogen ◽  
Gram Negative ◽  
Content Type ◽  
El Tor ◽  
Model Strain

ABSTRACTVibrio choleraeis a Gram-negative waterborne human pathogen and the causative agent of cholera. Here, we present the complete genome sequence of the seventh pandemic O1 biovar El Tor Inaba strain A1552 isolated in 1992. This clinical strain has served as an important model strain for studying cholera pathogenicity traits.

scholarly journals Complete Genome Sequence of WM99c, an Antibiotic-Resistant Acinetobacter baumannii Global Clone 2 (GC2) Strain Representing an Australian GC2 Lineage

2018 ◽  
Vol 7 (22) ◽  
Author(s):  
Steven J. Nigro ◽  
Ryan Wick ◽  
Kathryn E. Holt ◽  
Ruth M. Hall
Keyword(s):  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
East Coast ◽  
Antibiotic Resistant ◽  
Content Type ◽  
Long Read ◽  
Distinct Lineage ◽  
Sydney Australia

The extensively antibiotic-resistant Acinetobacter baumannii isolate WM99c recovered in Sydney, Australia, in 1999 is an early representative of a distinct lineage of global clone 2 (GC2) seen on the east coast of Australia. We present the complete 4.121-Mbp genome sequence (chromosome plus 2 plasmids), generated via long-read sequencing (PacBio).

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