scholarly journals Complete Genome Sequence of Bacteroidales Strain CF from a Chloroform-Dechlorinating Enrichment Culture

2013 ◽  
Vol 1 (6) ◽  
Author(s):  
S. Tang ◽  
E. A. Edwards
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Enrichment Culture

scholarly journals Complete Genome Sequence of a Phenanthrene Degrader, Burkholderia sp. HB-1 (NBRC 110738)

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Yoshiyuki Ohtsubo ◽  
Azusa Moriya ◽  
Hiromi Kato ◽  
Natsumi Ogawa ◽  
Yuji Nagata ◽  
...  
Keyword(s):  
Soil Sample ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Enrichment Culture ◽  
Biological Resource ◽  
Computational Tools ◽  
Resource Center ◽  
Institute Of Technology ◽  
Circular Chromosomes

The phenanthrene-degrading Burkholderia sp. HB-1 was isolated from a phenanthrene-enrichment culture seeded with a pristine farm soil sample. We report the complete genome sequence of HB-1, which has been deposited to the stock culture (NBRC 110738) at Biological Resource Center, National Institute of Technology and Evaluation (NITE), Tokyo, Japan. The genome of strain HB-1 comprises two circular chromosomes of 4.1 Mb and 3.1 Mb. The finishing was facilitated by the computational tools GenoFinisher, AceFileViewer, and ShortReadManager.

scholarly journals Complete Genome Sequence of Dehalococcoides mccartyi Strain WBC-2, Capable of Anaerobic Reductive Dechlorination of Vinyl Chloride

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Olivia Molenda ◽  
Shuiquan Tang ◽  
Elizabeth A. Edwards
Keyword(s):  
Vinyl Chloride ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Reductive Dechlorination ◽  
Complete Genome ◽  
Microbial Consortium ◽  
Enrichment Culture ◽  
Metagenomic Sequencing ◽  
The West ◽  
Dehalococcoides Mccartyi

Dehalococcoides mccartyi strain WBC-2 dechlorinates carcinogen vinyl chloride to ethene in the West Branch Canal Creek (WBC-2) microbial consortium used for bioaugmentation. We assembled and closed the complete genome sequence of this prokaryote using metagenomic sequencing from an enrichment culture.

scholarly journals Complete Genome Sequence of Gordonia rubripertincta SD5, a Soil Bacterium Isolated from a Di-(2-Ethylhexyl) Phthalate-Degrading Enrichment Culture

2020 ◽  
Vol 9 (45) ◽  
Author(s):  
Sang-Soo Han ◽  
Hye Kyeong Kang ◽  
Bok Yeon Jo ◽  
Byung-Gon Ryu ◽  
Hyun Mi Jin ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Enrichment Culture ◽  
Soil Bacterium ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Ethylhexyl Phthalate

ABSTRACT We report the complete genome sequence of Gordonia rubripertincta SD5, isolated from a soil-derived di-(2-ethylhexyl) phthalate-degrading enrichment culture. The final genome assembly consists of a 5.10-Mbp chromosome and a plasmid (159 kbp). A total of 4,814 coding sequences were predicted, including 4,741 protein-coding sequences.

scholarly journals Complete Genome Sequence of Achromobacter denitrificans PR1

2017 ◽  
Vol 5 (31) ◽  
Author(s):  
Ana C. Reis ◽  
Kevin Kroll ◽  
Margarita Gomila ◽  
Boris A. Kolvenbach ◽  
Philippe F. X. Corvini ◽  
...  
Keyword(s):  
Energy Source ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Enrichment Culture ◽  
Illumina Miseq ◽  
Content Type ◽  
Oxford Nanopore

ABSTRACT Achromobacter denitrificans strain PR1 was isolated from an enrichment culture able to use sulfamethoxazole as an energy source. Here, we describe the complete genome of this strain sequenced by Illumina MiSeq and Oxford Nanopore MinION.

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