scholarly journals Genome Sequencing and Analysis of the Filamentous Fungus Penicillium sclerotiorum 113, Isolated after Hurricane Sandy

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Guohua Yin ◽  
Yuliang Zhang ◽  
Kayla K. Pennerman ◽  
Sui Sheng T. Hua ◽  
Qixing Huang ◽  
...  
Keyword(s):  
New Jersey ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Filamentous Fungus ◽  
Draft Genome ◽  
Hurricane Sandy ◽  
Draft Genome Sequence ◽  
Penicillium Sclerotiorum

Penicillium sclerotiorum is a distinctive species within the genus Penicillium that usually produces vivid orange to red colonies, sometimes with colorful sclerotia. Here, we report the first draft genome sequence of P. sclerotiorum strain 113, isolated in 2013 in the aftermath of Hurricane Sandy from a flooded home in New Jersey.

scholarly journals Draft Genome Sequence of Streptomyces mexicanus Strain Q0842, Isolated from Human Skin

2020 ◽  
Vol 9 (44) ◽  
Author(s):  
Manon Boxberger ◽  
Mariem Ben Khedher ◽  
Anthony Levasseur ◽  
Bernard La Scola
Keyword(s):  
Human Skin ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Bacterial Species ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Swab Sample ◽  
Partial Genome Sequence ◽  
Partial Genome

ABSTRACT In 2003, Streptomyces mexicanus was reported as a novel xylanolytic bacterial species isolated from soil; a partial genome sequence was determined. In 2019, a strain from the same species was isolated from a hand skin swab sample from a healthy French woman. Genome sequencing revealed an 8,011,832-bp sequence with a GC content of 72.5%.

scholarly journals Draft Genome Sequence of Filamentous Fungus Phialemoniopsis curvata, Isolated from Diesel Fuel

2019 ◽  
Vol 8 (30) ◽  
Author(s):  
Vanessa A. Varaljay ◽  
Wanda J. Lyon ◽  
Audra L. Crouch ◽  
Carrie A. Drake ◽  
Jeffrey M. Hollomon ◽  
...  
Keyword(s):  
Fatty Acid ◽  
Genome Size ◽  
Genome Sequence ◽  
Diesel Fuel ◽  
Filamentous Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Beta Oxidation ◽  
Content Type

Phialemoniopsis curvata D216 is a filamentous fungus isolated from contaminated diesel fuel. The genome size is 40.3 Mbp with a G+C content of 54.81%. Its genome encodes enzymes and pathways likely involved in the degradation of and survival in fuel, including lipases, fatty acid transporters, and beta oxidation.

scholarly journals Draft Genome Sequence of an Extensively Drug-Resistant Salmonella enterica Serovar Typhi Strain from a Returned Traveler from Pakistan

2020 ◽  
Vol 9 (31) ◽  
Author(s):  
Samantha Hao ◽  
Tess Veuthey ◽  
Saharai Caldera ◽  
Paula Hayakawa Serpa ◽  
Barbara Haller ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Salmonella Enterica ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Drug Resistant ◽  
Content Type ◽  
Salmonella Enterica Serovar Typhi ◽  
Extensively Drug Resistant

ABSTRACT We report a draft genome sequence of extensively drug-resistant (XDR) Salmonella enterica serotype Typhi isolated from a returned traveler from Pakistan who developed sepsis. Whole-genome sequencing revealed relatedness to a previously reported outbreak in Pakistan and identified the blaCTX-M-15 and qnrS resistance genes.

scholarly journals Draft Genome Sequence of a Mycobacterium porcinum Strain Isolated from a Pet Cat with Atypical Mycobacterial Panniculitis

2020 ◽  
Vol 9 (11) ◽  
Author(s):  
Anthony Mannion ◽  
Tina McCollester ◽  
Alexander Sheh ◽  
Zeli Shen ◽  
Hilda Holcombe ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Fast Growing

A fast-growing Mycobacterium species was cultured from draining, purulent lesions on the caudal abdomen of a 12-year-old male domestic long-haired cat. Whole-genome sequencing identified the organism as Mycobacterium porcinum.

scholarly journals Draft Genome Sequence of Clostridium sp. Strain chh4-2 Isolated from Human Feces

2018 ◽  
Vol 6 (8) ◽  
Author(s):  
Chien-Hsun Huang ◽  
Jong-Shian Liou ◽  
Chun-Lin Wang ◽  
Lina Huang
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Genome Assembly ◽  
Fecal Sample ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Human Feces ◽  
Content Type ◽  
Old Adult

ABSTRACT Here, we report the draft genome sequence of a Clostridium sp. strain isolated from a fecal sample of a 34-year-old adult male in Taiwan. This strain may represent a new bacterium, as suggested by a comparison based on whole-genome sequencing. The genome assembly comprised 6,089,737 bp, with a 45.63% G+C content.

scholarly journals New Genome Sequence of an Echinaceapurpurea Endophyte, Arthrobacter sp. Strain EpSL27, Able To Inhibit Human-Opportunistic Pathogens

2017 ◽  
Vol 5 (25) ◽  
Author(s):  
Elisangela Miceli ◽  
Luana Presta ◽  
Valentina Maggini ◽  
Marco Fondi ◽  
Emanuele Bosi ◽  
...  
Keyword(s):  
Medicinal Plant ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Echinacea Purpurea ◽  
Draft Genome Sequence ◽  
Opportunistic Pathogens ◽  
Bacterial Strains

ABSTRACT We announce here the draft genome sequence of Arthrobacter sp. strain EpSL27, isolated from the stem and leaves of the medicinal plant Echinacea purpurea and able to inhibit human-pathogenic bacterial strains. The genome sequencing of this strain may lead to the identification of genes involved in the production of antimicrobial molecules.

scholarly journals Draft Genome Sequence of Pandoravirus japonicus Isolated from the Sabaishi River, Niigata, Japan

2021 ◽  
Vol 10 (19) ◽  
Author(s):  
Nao Hosokawa ◽  
Haruna Takahashi ◽  
Keita Aoki ◽  
Masaharu Takemura
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
The Third

ABSTRACT “Pandoraviridae” is a proposed family of the phylum Nucleocytoviricota. Its features include an amphora-shaped capsid and the largest genome among all viruses. We report the isolation and genome sequencing of a new member of this family, named Pandoravirus japonicus, the third strain discovered in Japan.

scholarly journals Draft Genome Sequence of Ustilago trichophora RK089, a Promising Malic Acid Producer

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Thiemo Zambanini ◽  
Joerg M. Buescher ◽  
Guido Meurer ◽  
Nick Wierckx ◽  
Lars M. Blank
Keyword(s):  
Metabolic Engineering ◽  
Genome Sequencing ◽  
Genome Sequence ◽  
Malic Acid ◽  
De Novo ◽  
Draft Genome ◽  
Ustilago Maydis ◽  
Essential Genes ◽  
Smut Fungus ◽  
Draft Genome Sequence

The basidiomycetous smut fungus Ustilago trichophora  RK089 produces malate from glycerol. De novo genome sequencing revealed a 20.7-Mbp genome (301 gap-closed contigs, 246 scaffolds). A comparison to the genome of Ustilago maydis  521 revealed all essential genes for malate production from glycerol contributing to metabolic engineering for improving malate production.

scholarly journals Draft Genome Sequence of the Pathogenic Filamentous Fungus Aspergillus lentulus IFM 54703 T

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
Yoko Kusuya ◽  
Kanae Sakai ◽  
Katsuhiko Kamei ◽  
Hiroki Takahashi ◽  
Takashi Yaguchi
Keyword(s):  
Aspergillus Fumigatus ◽  
Genome Sequence ◽  
Causative Agent ◽  
Sibling Species ◽  
Filamentous Fungus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Aspergillus Lentulus ◽  
First Time

Aspergillus lentulus , a sibling species of Aspergillus fumigatus , has been reported as a causative agent of aspergillosis, and exhibited low susceptibility to azole. Here, we present the draft genome sequence of A. lentulus strain IFM 54703 T for the first time.

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