scholarly journals Draft Genome Sequences of Nine Pseudomonas aeruginosa Strains, Including Eight Clinical Isolates: TABLE 1 

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Patricio Jeraldo ◽  
Scott A. Cunningham ◽  
Daniel Quest ◽  
Robert A. Sikkink ◽  
Daniel O’Brien ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Draft Genome ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Mate Pair ◽  
Sequence Types ◽  
Mate Pair Library

We report on nine draft genomes of Pseudomonas aeruginosa isolates, assembled using a hybrid paired-end and Nextera mate-pair library approach. Eight are of clinical origin, and one is the ATCC 27853 strain. We also report their multilocus sequence types.

scholarly journals Draft Genome Sequences of Two Pseudomonas aeruginosa Clinical Isolates with Different Antibiotic Susceptibilities

2011 ◽  
Vol 193 (19) ◽  
pp. 5573-5573 ◽  
Author(s):  
P. Soares-Castro ◽  
D. Marques ◽  
S. Demyanchuk ◽  
A. Faustino ◽  
P. M. Santos
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Draft Genome ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Antibiotic Susceptibilities

scholarly journals First Draft Genome Sequences of Malaysian Clinical Isolates of Corynebacterium diphtheriae

2017 ◽  
Vol 5 (9) ◽  
Author(s):  
Norazah Ahmad ◽  
Shirley Yi Fen Hii ◽  
Mohd Khairul Nizam Mohd Khalid ◽  
Muhammad Adib Abd Wahab ◽  
Rohaidah Hashim ◽  
...  
Keyword(s):  
Draft Genome ◽  
Corynebacterium Diphtheriae ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type

ABSTRACT Corynebacterium diphtheriae has caused multiple isolated diphtheria cases in Malaysia over the years. Here, we report the first draft genome sequences of 15 Malaysia C. diphtheriae clinical isolates collected from the years 1981 to 2016.

scholarly journals Draft Genome Sequences of Two Veillonella tobetsuensis Clinical Isolates from Intraoperative Bronchial Fluids of Elderly Patients with Pulmonary Carcinoma

2019 ◽  
Vol 8 (38) ◽  
Author(s):  
Izumi Mashima ◽  
Tohru Miyoshi-Akiyama ◽  
Junko Tomida ◽  
Ryo Kutsuna ◽  
Jumpei Washio ◽  
...  
Keyword(s):  
Elderly Patients ◽  
Early Stage ◽  
Draft Genome ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Oral Biofilm ◽  
Content Type ◽  
Pulmonary Carcinoma ◽  
Biofilm Development

To date, Veillonella tobetsuensis has been known as an oral anaerobe and a facilitator of early-stage oral biofilm development with streptococci. Here, we report the draft genome sequences of 2 strains of V. tobetsuensis first isolated from intraoperative bronchial fluids of elderly patients with pulmonary carcinoma.

scholarly journals Draft Genome Sequences of Two Highly Erythromycin-Resistant Streptococcus gallolyticus subsp. gallolyticus Isolates Containing a Novel Tn916-Like Element, Tn6331

2017 ◽  
Vol 5 (16) ◽  
Author(s):  
Stanimir Kambarev ◽  
Frédéric Pecorari ◽  
Stéphane Corvec
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Clinical Isolates ◽  
Draft Genome Sequence ◽  
Genome Sequences ◽  
Conjugative Transposon ◽  
Content Type ◽  
Streptococcus Gallolyticus

ABSTRACT Recently, we reported the draft genome sequence of Streptococcus gallolyticus NTS31106099. It was found to contain a previously unknown putative Tn916-like conjugative transposon, Tn6263. Here, we report the draft genome sequences of two other clinical isolates, NTS31301958 and NTS31307655. Both of them contain another novel element, Tn6331, which is highly similar to Tn6263.

scholarly journals Whole-Genome Sequences of Corynebacterium macginleyi CCUG 32361T and Clinical Isolates NML 080212 and NML 120205

2018 ◽  
Vol 7 (23) ◽  
Author(s):  
Anne-Marie Bernier ◽  
Kathryn Bernard
Keyword(s):  
Draft Genome ◽  
Clinical Isolates ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type

Draft genome sequences of Corynebacterium macginleyi CCUG 32361T and clinical isolates NML 080212 and NML 120205 were assembled and studied. Genome sizes ranged from 2.35 Mb to 2.42 Mb, with G+C contents ranging from 57.1% to 57.2%.

scholarly journals Complete and Draft Genome Sequences of Eight Oceanic Pseudomonas aeruginosa Strains

2017 ◽  
Vol 5 (44) ◽  
Author(s):  
Yohei Kumagai ◽  
Susumu Yoshizawa ◽  
Keiji Nakamura ◽  
Yoshitoshi Ogura ◽  
Tetsuya Hayashi ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Bacterial Species ◽  
Draft Genome ◽  
Open Ocean ◽  
Genome Sequences ◽  
Content Type

ABSTRACT Pseudomonas aeruginosa is one of the most common model bacterial species, and genomes of hundreds of strains of this species have been sequenced to date. However, currently there is only one available genome of an oceanic isolate. Here, we report two complete and six draft genome sequences of P. aeruginosa isolates from the open ocean.

scholarly journals The Resistome of Pseudomonas aeruginosa in Relationship to Phenotypic Susceptibility

2014 ◽  
Vol 59 (1) ◽  
pp. 427-436 ◽  
Author(s):  
Veronica N. Kos ◽  
Maxime Déraspe ◽  
Robert E. McLaughlin ◽  
James D. Whiteaker ◽  
Paul H. Roy ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Multidrug Resistant ◽  
Clinical Isolates ◽  
Genetic Determinants ◽  
Content Type ◽  
Susceptibility Data ◽  
Next Generation Sequencing Ngs ◽  
Sequence Types ◽  
Generation Sequencing ◽  
Phenotypic Susceptibility

ABSTRACTMany clinical isolates ofPseudomonas aeruginosacause infections that are difficult to eradicate due to their resistance to a wide variety of antibiotics. Key genetic determinants of resistance were identified through genome sequences of 390 clinical isolates ofP. aeruginosa, obtained from diverse geographic locations collected between 2003 and 2012 and were related to microbiological susceptibility data for meropenem, levofloxacin, and amikacin. β-Lactamases and integron cassette arrangements were enriched in the established multidrug-resistant lineages of sequence types ST111 (predominantly O12) and ST235 (O11). This study demonstrates the utility of next-generation sequencing (NGS) in defining relevant resistance elements and highlights the diversity of resistance determinants withinP. aeruginosa. This information is valuable in furthering the design of diagnostics and therapeutics for the treatment ofP. aeruginosainfections.

scholarly journals Major Release of 161 Whole-Genome Sequences from the International Pseudomonas Consortium Database

2019 ◽  
Vol 8 (13) ◽  
Author(s):  
Julie Jeukens ◽  
Jean-Guillaume Emond-Rheault ◽  
Luca Freschi ◽  
Irena Kukavica-Ibrulj ◽  
Roger C. Levesque
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Environmental Bacterium

Pseudomonas aeruginosa is an environmental bacterium and opportunistic pathogen. Here, we present draft genome sequences for 161 isolates from diverse clinical and environmental sources.

scholarly journals Draft Genome Sequences of Eight Pseudomonas aeruginosa Corneal Infection Isolates

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Vishnu Raghuram ◽  
Joanna B. Goldberg
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Contact Lens ◽  
Draft Genome ◽  
Ocular Infection ◽  
Bacterial Keratitis ◽  
Genome Sequences ◽  
Content Type ◽  
Corneal Infection

Pseudomonas aeruginosa is the major cause of bacterial keratitis, a sight-threatening ocular infection that can occur in contact lens wearers, as well as in others. Here, we report the draft genomes of 8 different P. aeruginosa corneal isolates, adding to the list of publicly available corneal infection-associated P. aeruginosa genomes.

scholarly journals Draft Genome Sequences of Four Pseudomonas aeruginosa Clinical Strains with Various Biofilm Phenotypes

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Amine M. Boukerb ◽  
Marjolaine Simon ◽  
Erwan Pernet ◽  
Albane Jouault ◽  
Emilie Portier ◽  
...  
Keyword(s):  
Cystic Fibrosis ◽  
Pseudomonas Aeruginosa ◽  
Genome Size ◽  
Draft Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Clinical Strains

Biofilms produced by Pseudomonas aeruginosa present a serious threat to cystic fibrosis patients. Here, we report the draft genome sequences of four cystic fibrosis isolates displaying various mucoid and biofilm phenotypes. The estimated average genome size was about 6,255,986 ± 50,202 bp with a mean G+C content of 66.52 ± 0.06%.

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