scholarly journals Complete Genome Sequences of Yersinia pestis from Natural Foci in China

2010 ◽  
Vol 192 (13) ◽  
pp. 3551-3552 ◽  
Author(s):  
Xiaona Shen ◽  
Qi Wang ◽  
Lianxu Xia ◽  
Xiaoyu Zhu ◽  
Zhikai Zhang ◽  
...  
Keyword(s):  
Yersinia Pestis ◽  
Causative Agent ◽  
Complete Genome ◽  
Genome Sequences ◽  
Natural Foci

ABSTRACT Yersinia pestis, the causative agent of plague, is a deadly bacterium that affects humans. Strain D106004 was isolated from a new plague focus in Yulong County, China, in 2006. To gain insights into the epidemic origin, we have sequenced the genomes of D106004 and strains Z176003 and D182038, isolated from neighboring regions.

scholarly journals SUBSPECIES DIFFERENTIATION OF YERSINIA PESTIS STRAINS BY PCR WITH HYBRIDIZATION-FLUORESCENT DETECTION

2017 ◽  
pp. 22-27 ◽  
Author(s):  
K. A. Nikiforov ◽  
E. G. Oglodin ◽  
L. M. Kukleva ◽  
G. A. Eroshenko ◽  
V. G. Germanchuk ◽  
...  
Keyword(s):  
Yersinia Pestis ◽  
Real Time ◽  
Causative Agent ◽  
Fluorescent Detection ◽  
Genome Sequences ◽  
The Caucasus ◽  
Subspecies Differentiation ◽  
Taqman Probes ◽  
Natural Foci ◽  
Dna Target Search

Aim. Develop a method of differentiation of Y.pestis strains of different subspecies based on PCR with hybridization-fluorescent detection in real-time. Materials and methods. DNA target search for differentiation of subspecies of plague causative agent was carried out by Mauve 2.3.1, Mega 5.0 and BLAST algorithm based on comparison offull-genome sequences of Y.pestis strains. Primers and TaqMan probes were calculated for the DNA targets found, conditions of PCR with hybridization-fluorescent detection - optimized. Results. DNA targets carrying marker mutations for the caucasus, altai, gissar, ulegei subspecies, strains from Talass alpine plague reservoir were detected. The effectiveness of the DNA targets found and the developed approach of subspecies differentiation is confirmed on 101 Y.pestis strains of different subspecies, isolated from natural foci of Russia, near and far abroad. Conclusion. The developed approach based on PCR with real-time detection allows for a rapid and effective differentiation of Y.pestis strains of various subspecies.

scholarly journals Complete Genome Sequences of Paenibacillus larvae Phages Halcyone, Heath, Scottie, and Unity from Las Vegas, Nevada

2018 ◽  
Vol 7 (12) ◽  
Author(s):  
Diane G. Yost ◽  
Carolyn Chang ◽  
Lucy LeBlanc ◽  
Erin Cassin ◽  
Ceara Peterman ◽  
...  
Keyword(s):  
Causative Agent ◽  
Complete Genome ◽  
Las Vegas ◽  
Paenibacillus Larvae ◽  
American Foulbrood ◽  
Genome Sequences ◽  
Content Type ◽  
American Foulbrood Disease

We present the complete genome sequences of four phages that infect Paenibacillus larvae, the causative agent of American foulbrood disease in honeybees. The phages were isolated from beehives and beeswax products from Las Vegas, Nevada.

scholarly journals Complete Genome Sequences of Nine Phages Capable of Infecting Paenibacillus larvae , the Causative Agent of American Foulbrood Disease in Honeybees: TABLE 1 

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Philippos K. Tsourkas ◽  
Diane G. Yost ◽  
Andrew Krohn ◽  
Lucy LeBlanc ◽  
Anna Zhang ◽  
...  
Keyword(s):  
Causative Agent ◽  
Complete Genome ◽  
Paenibacillus Larvae ◽  
American Foulbrood ◽  
Genome Sequences ◽  
American Foulbrood Disease ◽  
Single Publication

We present here the complete genome sequences of nine phages that infect Paenibacillus larvae , the causative agent of American foulbrood disease in honeybees. The phages were isolated from soil, propolis, and infected bees from three U.S. states. This is the largest number of P. larvae phage genomes sequenced in a single publication to date.

scholarly journals Genome Sequences of Four Vibrio parahaemolyticus Strains Isolated from the English Channel and the River Thames

2019 ◽  
Vol 8 (24) ◽  
Author(s):  
Lucy Witherall ◽  
Sariqa Wagley ◽  
Clive Butler ◽  
Charles R. Tyler ◽  
Ben Temperton
Keyword(s):  
United Kingdom ◽  
Causative Agent ◽  
Complete Genome ◽  
Vibrio Parahaemolyticus ◽  
Sea Surface ◽  
Sea Surface Temperatures ◽  
English Channel ◽  
Genome Sequences ◽  
Content Type ◽  
The United Kingdom

Vibrio parahaemolyticus is the lead causative agent for seafood-borne human gastroenteritis. While its occurrence has traditionally been uncommon in Europe and the United Kingdom, rising sea surface temperatures have resulted in an increased prevalence. Here, we present the complete genome sequences of four novel V. parahaemolyticus strains isolated in the United Kingdom.

scholarly journals Genome Assemblies for 11 Yersinia pestis Strains Isolated in the Caucasus Region: TABLE 1 

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Ekaterine Zhgenti ◽  
Shannon L. Johnson ◽  
Karen W. Davenport ◽  
Gvantsa Chanturia ◽  
Hajnalka E. Daligault ◽  
...  
Keyword(s):  
Yersinia Pestis ◽  
Causative Agent ◽  
Reference Strain ◽  
Genome Sequences ◽  
The Caucasus ◽  
Caucasus Region ◽  
Genome Assemblies ◽  
Strain Genome

Yersinia pestis , the causative agent of plague, is endemic to the Caucasus region but few reference strain genome sequences from that region are available. Here, we present the improved draft or finished assembled genomes from 11 strains isolated in the nation of Georgia and surrounding countries.

scholarly journals Complete Genome Sequences of 18 Paenibacillus larvae Phages from the Western United States

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Bryan D. Merrill ◽  
Christopher P. Fajardo ◽  
Jared A. Hilton ◽  
Ashley M. Payne ◽  
Andy T. Ward ◽  
...  
Keyword(s):  
United States ◽  
Causative Agent ◽  
Complete Genome ◽  
Western United States ◽  
Paenibacillus Larvae ◽  
American Foulbrood ◽  
Genome Sequences ◽  
Content Type ◽  
Brigham Young University ◽  
Complete Genomes

We present here the complete genomes of 18 phages that infect Paenibacillus larvae, the causative agent of American foulbrood in honeybees. The phages were isolated between 2014 and 2016 as part of an undergraduate phage discovery course at Brigham Young University.

scholarly journals Complete Genome Sequences of Paenibacillus larvae Phages BN12, Dragolir, Kiel007, Leyra, Likha, Pagassa, PBL1c, and Tadhana

2018 ◽  
Vol 6 (24) ◽  
Author(s):  
Jamison K. Walker ◽  
Bryan D. Merrill ◽  
Jordan A. Berg ◽  
Aziza Dhalai ◽  
Douglas W. Dingman ◽  
...  
Keyword(s):  
Causative Agent ◽  
Complete Genome ◽  
Paenibacillus Larvae ◽  
American Foulbrood ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes ◽  
The Usa

ABSTRACT We present here the complete genomes of eight phages that infect Paenibacillus larvae, the causative agent of American foulbrood in honeybees. Phage PBL1c was originally isolated in 1984 from a P. larvae lysogen, while the remaining phages were isolated in 2014 from bee debris, honeycomb, and lysogens from three states in the USA.

scholarly journals Complete Genome Sequences of Seven Avibacterium paragallinarum Isolates from Poultry Farms in Pennsylvania, USA

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Maurice Byukusenge ◽  
Ruth H. Nissly ◽  
Lingling Li ◽  
Traci Pierre ◽  
Tammy Mathews ◽  
...  
Keyword(s):  
Causative Agent ◽  
Complete Genome ◽  
Egg Production ◽  
Economic Losses ◽  
Poultry Industry ◽  
Genome Sequences ◽  
Content Type ◽  
Infectious Coryza ◽  
Avibacterium Paragallinarum ◽  
Poultry Farms

ABSTRACT Avibacterium paragallinarum, the causative agent of infectious coryza, causes significant economic losses to the poultry industry due to increased culling rates in growing chickens and decreased egg production in layers. We present the complete genome sequences of seven strains of Avibacterium paragallinarum isolated from poultry farms in Pennsylvania during 2019.

scholarly journals Complete Genome Sequences of Two Isolates of Canis familiaris Oral Papillomavirus from South Africa

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Guy L. Regnard ◽  
Nwaxigombe M. Baloyi ◽  
Leonard R. Bracher ◽  
Inga I. Hitzeroth ◽  
Edward P. Rybicki
Keyword(s):  
South Africa ◽  
Causative Agent ◽  
Complete Genome ◽  
Canis Familiaris ◽  
Full Length ◽  
The Self ◽  
Genome Sequences ◽  
First Report ◽  
Full Length Genome

Canis familiaris oral papillomavirus, formerly canine oral papillomavirus, is a causative agent of the self-resolving canine oral papillomatosis and was first described in 1994. This is the first report of two full-length genome sequences described in South Africa and indicates the highly conserved nature of Canis familiaris oral papillomavirus.

scholarly journals Complete Genome Sequences of Six Staphylococcus pseudintermedius Strains from Dogs with Superficial Pyoderma in Georgia, USA

2021 ◽  
Vol 10 (25) ◽  
Author(s):  
Maurice Byukusenge ◽  
Frane Banovic ◽  
Lingling Li ◽  
Suresh V. Kuchipudi ◽  
Bhushan M. Jayarao ◽  
...  
Keyword(s):  
Causative Agent ◽  
Complete Genome ◽  
Genome Sequences ◽  
Staphylococcus Pseudintermedius ◽  
Content Type ◽  
Veterinary Importance

Staphylococcus pseudintermedius is a pathogen of veterinary importance, as it is the major causative agent of superficial pyoderma in dogs. We present the complete genome sequences of six strains of S. pseudintermedius derived from dogs affected with epidermal collarettes and superficial bacterial folliculitis, which are two variants of superficial pyoderma.

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