scholarly journals Draft Genome Sequence of an Enterococcus faecalis Strain (24FS) That Was Isolated from Healthy Infant Feces and Exhibits High Antibacterial Activity, Multiple-Antibiotic Resistance, and Multiple Virulence Factors

2019 ◽  
Vol 8 (13) ◽  
Author(s):  
Nancy M. El Halfawy ◽  
Moustafa Y. El-Naggar ◽  
Simon C. Andrews
Keyword(s):  
Antibiotic Resistance ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Healthy Infant ◽  
Antibiotic Resistant ◽  
Content Type ◽  
High Antibacterial Activity ◽  
Protein Encoding ◽  
Infant Feces

Enterococcus faecalis 24FS is a bacteriocin-producing, multiply antibiotic-resistant, and potentially virulent bacterium isolated from healthy infant feces. The draft 2.9-Mb genome sequence revealed 2,968 protein-encoding genes; 11 antibiotic resistance, 8 virulence, and 3 bacteriocin genes; and 2 plasmids, 4 prophages, 30 insertion sequence (IS) elements, 1 transposon, and 1 integron.

scholarly journals Draft Genome Sequence of Antibiotic-Resistant Enterococcus faecalis Strain UMB0843, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Natalia Purta ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Urinary Tract ◽  
Enterococcus Faecalis ◽  
Genome Analysis ◽  
Nosocomial Infections ◽  
Draft Genome ◽  
Antibiotic Resistant ◽  
Content Type ◽  
Female Urinary Tract ◽  
Multiple Antibiotics

Here, we introduce the 2.8-Mbp draft genome of Enterococcus faecalis strain UMB0843, isolated from the female urinary tract. E. faecalis is a leading cause of nosocomial infections, and many strains are often resistant to multiple antibiotics. We focus our genome analysis on the multiple genes involved in antibiotic resistance in this strain.

scholarly journals Draft Genome Sequence of Enterococcus faecalis UMB1309, Isolated from Catheterized Urine

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Adam Schwartz ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Enterococcus Faecalis ◽  
Virulence Factors ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Multiple Genes

ABSTRACT A strain of Enterococcus faecalis was isolated from catheterized urine. Here, we present the draft genome sequence of this isolate, E. faecalis UMB1309. Analysis of the genome revealed multiple genes coding for virulence factors, as well as genes associated with antibiotic resistance.

scholarly journals Draft Genome Sequence of Bifidobacterium pseudocatenulatum Bif4, Isolated from Healthy Infant Feces

2020 ◽  
Vol 9 (26) ◽  
Author(s):  
Atul Munish Chander ◽  
Shashank Singh ◽  
Shikha Sharma ◽  
Vasvi Chaudhry ◽  
Sivasubramanian Rajarammohan ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Fecal Sample ◽  
Draft Genome ◽  
Healthy Infant ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Infant Feces

ABSTRACT We report the 2.24-Mb draft genome sequence of Bifidobacterium pseudocatenulatum Bif4, isolated from a fecal sample from a healthy infant. The specific annotations revealed genes predictive of its probiotic attributes.

scholarly journals Genome Sequence of Enterococcus faecalis Strain CG_E

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Christina Gabris ◽  
Anja Poehlein ◽  
Frank R. Bengelsdorf ◽  
Rolf Daniel ◽  
Peter Dürre
Keyword(s):  
Lactic Acid ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gram Positive ◽  
Content Type ◽  
Protein Encoding ◽  
Rna Genes

ABSTRACT Enterococcus faecalis CG_E is a Gram-positive, lactic acid-producing coccus. The draft genome of E. faecalis strain CG_E comprises 2,969,881 bp and exhibits a G+C content of 37.34%. The genome encodes 2,848 predicted protein-encoding and 97 RNA genes.

scholarly journals Draft Genome Sequence of Enterococcus faecalis UMB7780, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Martin Kalski ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Urinary Tract ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Genome Coverage ◽  
Content Type ◽  
Female Urinary Tract

ABSTRACT Here, we present the draft genome sequence of Enterococcus faecalis UMB7780, isolated from the female urinary tract. The genome size is 3,005,901 bp, with a GC content of 37.36%, genome coverage of 179×, and an N50 score of 169,627 bp. Genome analysis identified evidence of antibiotic resistance, as well as intact prophages.

scholarly journals Draft Genome Sequence of Enterococcus faecalis AS003, a Strain Possessing All Three Type II-a CRISPR Loci

2021 ◽  
Vol 10 (11) ◽  
Author(s):  
Kevin B. Mulkerrins ◽  
Casandra Lyons ◽  
Michael P. Shiaris
Keyword(s):  
Antibiotic Resistance ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Human Microbiome ◽  
Type Ii ◽  
Content Type ◽  
Cas Genes ◽  
Clinically Significant ◽  
Unusual Strain

ABSTRACT Enterococcus faecalis is a clinically significant member of the human microbiome. Three CRISPR-Cas loci are located in conserved locations. Previous studies provide evidence that E. faecalis strains with functional CRISPR-Cas genes are negatively correlated with antibiotic resistance. Here, we report the genome sequence of an unusual strain possessing all three CRISPR-Cas loci.

scholarly journals Draft Genome Sequence of Enterococcus faecalis DD14, a Bacteriocinogenic Lactic Acid Bacterium with Anti-Clostridium Activity

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Yanath Belguesmia ◽  
Valérie Leclère ◽  
Matthieu Duban ◽  
Eric Auclair ◽  
Djamel Drider
Keyword(s):  
Lactic Acid ◽  
Lactic Acid Bacterium ◽  
Enterococcus Faecalis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Content Type ◽  
Gram Positive Bacteria ◽  
Healthy Newborn

ABSTRACT We report the draft genome sequence of Enterococcus faecalis DD14, a strain isolated from meconium of a healthy newborn at Roubaix Hospital (France). The strain displayed antagonism against a set of Gram-positive bacteria through concomitant production of lactic acid and bacteriocin. The genome has a size of 2,893,365 bp and a 37.3% G+C ratio and is predicted to contain at least 2,755 coding sequences and 62 RNAs.

scholarly journals Draft Genome Sequence of Ezakiella peruensis Strain M6.X2, a Human Gut Gram-Positive Anaerobic Coccus

2018 ◽  
Vol 6 (9) ◽  
pp. e01487-17
Author(s):  
Awa Diop ◽  
Khoudia Diop ◽  
Enora Tomei ◽  
Didier Raoult ◽  
Florence Fenollar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Human Gut ◽  
Gene Encoding ◽  
Content Type ◽  
Protein Encoding ◽  
Short Palindromic Repeat ◽  
Encoding Genes

ABSTRACT We report here the draft genome sequence of Ezakiella peruensis strain M6.X2T. The draft genome is 1,672,788 bp long and harbors 1,589 predicted protein-encoding genes, including 26 antibiotic resistance genes with 1 gene encoding vancomycin resistance. The genome also exhibits 1 clustered regularly interspaced short palindromic repeat region and 333 genes acquired by horizontal gene transfer.

scholarly journals Draft Genome Sequence of Corynebacterium aurimucosum UMB7769, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Samantha Eskandar ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Urinary Tract ◽  
Genome Sequence ◽  
Resistance Genes ◽  
Draft Genome ◽  
Gc Content ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Female Urinary Tract

ABSTRACT Here, we present the draft genome sequence of Corynebacterium aurimucosum UMB7769, isolated from the female urinary tract. The size of the genome is 2,731,818 bp, assembled in 50 contigs, with an observed GC content of 60.9% and an N50 score of 129,518 bp. Annotation revealed 31 antibiotic resistance genes.

scholarly journals Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar

2019 ◽  
Vol 8 (35) ◽  
Author(s):  
Mamitina Alain Noah Rabenandrasana ◽  
Lala Fanomezantsoa Rafetrarivony ◽  
Lalainasoa Odile Rivoarilala ◽  
Vincent Enouf ◽  
Annick Lalaina Robinson ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Blood Culture ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Chryseobacterium Indologenes

We report here the draft genome sequence of a Chryseobacterium indologenes strain, isolated from a blood culture of a 2.2-year-old child admitted to the hospital for vomiting and coughing. The genome was composed of 5,063,674 bp and had 37.04% GC content. We detected 4,796 genes with predicted protein-coding functions, including those associated with antibiotic resistance.

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