scholarly journals Complete Genome Sequences of Microbacterium Bacteriophages Danno, Otwor, and Scumberland, Isolated in Clarksville, Tennessee

2021 ◽  
Vol 10 (13) ◽  
Author(s):  
Sergei A. Markov ◽  
James C. Church ◽  
Leong Lee ◽  
Cole M. Bell ◽  
Sarah D. Binkley ◽  
...  
Keyword(s):  
Complete Genome ◽  
Soil Samples ◽  
Genome Sequences ◽  
Content Type ◽  
A Genome

ABSTRACT This paper reports the genome sequences of bacteriophages isolated from soil samples using Microbacterium foliorum. Phages Danno and Otwor (cluster EE) have genomes of 17,452 bp and 17,454 bp, respectively, and 25 predicted genes. The phage Scumberland (cluster EC) has a genome of 53,276 bp with 92 predicted genes.

scholarly journals Complete Genome Sequence of α-1,3-Glucanase-Producing Strain Paracoccus mutanolyticus RSP-02

2018 ◽  
Vol 7 (14) ◽  
Author(s):  
Ravi Naga Amrutha ◽  
Abhishek Shrivastav ◽  
Reddy Shetty Shravani ◽  
Sudheer Kumar Buddana ◽  
Uday Deshpande ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Complete Genome Sequence ◽  
Bacterial Strain ◽  
Complete Genome ◽  
Soil Samples ◽  
Whole Genome ◽  
Content Type ◽  
A Genome ◽  
Cellulosic Waste

A mutanase (α-1,3 glucanase)-producing bacterial strain of Paracoccus mutanolyticus was isolated from soil samples rich in cellulosic waste. Here, we report the whole-genome sequencing and annotation of P. mutanolyticus, which has a genome size of around 3.5 Mb and the potential to degrade water-insoluble α-1,3 glucans with an overall G+C content of 67.4%.

scholarly journals Complete Genome Sequences of 13 Bacillus subtilis Soil Isolates for Studying Secondary Metabolite Diversity

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Heiko T. Kiesewalter ◽  
Carlos N. Lozano-Andrade ◽  
Gergely Maróti ◽  
Dan Snyder ◽  
Vaughn S. Cooper ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
Secondary Metabolite ◽  
Complete Genome ◽  
Soil Samples ◽  
Genome Sequences ◽  
Production Potential ◽  
Positive Bacterium ◽  
Content Type ◽  
Metabolite Production ◽  
Secondary Metabolite Diversity

Bacillus subtilis is a plant-benefiting soil-dwelling Gram-positive bacterium with secondary metabolite production potential. Here, we report the complete genome sequences of 13 B. subtilis strains isolated from different soil samples in Germany and Denmark.

scholarly journals Complete Genome Sequences of Cluster F Mycobacteriophages EleanorGeorge, Mattes, and Spikelee

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Christina Jacob ◽  
Yunia Alvarez ◽  
Cynthia Castro ◽  
Katherine Clarke ◽  
Linda Dantico ◽  
...  
Keyword(s):  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
Sequence Similarity ◽  
Soil Samples ◽  
Genome Sequences ◽  
Content Type ◽  
Isolation Techniques

EleanorGeorge, Mattes, and Spikelee are mycobacteriophages isolated from different soil samples using Mycobacterium smegmatis mc2155 as the host. Each was obtained using direct isolation techniques, purified, and then sequenced. Based on sequence similarity, all three belong to the F1 subcluster and are temperate phages.

scholarly journals Complete Genome Sequences of Bacillus Phages Janet and OTooleKemple52

2018 ◽  
Vol 6 (19) ◽  
pp. e00083-18
Author(s):  
Brenna Kent ◽  
Thomas Raymond ◽  
Philip D. Mosier ◽  
Allison A. Johnson
Keyword(s):  
Bacillus Cereus ◽  
Complete Genome ◽  
Soil Samples ◽  
Genome Sequences ◽  
Host Preferences ◽  
Content Type ◽  
Sequence Identity ◽  
Double Stranded Dna ◽  
High Degree

ABSTRACT We report here the genome sequences of two novel Bacillus cereus group-infecting bacteriophages, Janet and OTooleKemple52. These bacteriophages are double-stranded DNA-containing Myoviridae isolated from soil samples. While their genomes share a high degree of sequence identity with one another, their host preferences are unique.

scholarly journals Complete Genome Sequences of Six Lactobacillus iners Strains Isolated from the Human Vagina

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Michael T. France ◽  
Lindsay Rutt ◽  
Shilpa Narina ◽  
Sarah Arbaugh ◽  
Elias McComb ◽  
...  
Keyword(s):  
Genome Size ◽  
Complete Genome ◽  
Vaginal Swab ◽  
Vaginal Microbiota ◽  
Genome Sequences ◽  
Content Type ◽  
A Genome ◽  
Human Vagina

Lactobacillus iners is a common member of the human vaginal microbiota, with a genome size smaller than that of other lactobacilli. Here, we report the complete genome sequences of six L. iners strains isolated from different vaginal swab specimens. Three strains were found to harbor ∼100-kbp plasmids, which were not known previously.

scholarly journals Complete Genome Sequences of Erwinia amylovora Phages vB_EamP-S2 and vB_EamM-Bue1

2018 ◽  
Vol 7 (3) ◽  
Author(s):  
Leandra E. Knecht ◽  
Yannick Born ◽  
Joël F. Pothier ◽  
Martin J. Loessner ◽  
Lars Fieseler
Keyword(s):  
Genome Size ◽  
Plant Pathogen ◽  
Complete Genome ◽  
Erwinia Amylovora ◽  
Genome Sequences ◽  
Content Type ◽  
A Genome

Phages vB_EamP-S2 (S2) and vB_EamM-Bue1 (Bue1) infect the plant pathogen Erwinia amylovora. S2 has a genome size of 45,495 bp and belongs to the genus SP6virus.

scholarly journals Complete Genome Sequences of Cluster G Mycobacteriophage Darionha, Cluster A Mycobacteriophage Salz, and Cluster J Mycobacteriophage ThreeRngTarjay

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Andrea M. Sandoval ◽  
Amber M. Abram ◽  
Zahraa M. Alhabib ◽  
Angelina S. Antonyan ◽  
Salar M. Brikho ◽  
...  
Keyword(s):  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
Soil Samples ◽  
Genome Sequences ◽  
Content Type ◽  
Cluster A

Mycobacteriophages Darionha, Salz, and ThreeRngTarjay are mycobacteriophages isolated using the host Mycobacterium smegmatis mc2155. Following isolation from soil samples, all three siphoviridae phages were characterized, and their genomes were sequenced and annotated.

scholarly journals Complete Genome Sequences of 12 B1 Cluster Mycobacteriophages, Gareth, JangoPhett, Kailash, MichaelPhcott, PhenghisKhan, Phleuron, Phergie, PhrankReynolds, PhrodoBaggins, Phunky, Vaticameos, and Virapocalypse

2019 ◽  
Vol 8 (8) ◽  
Author(s):  
Kristofer A. Apellido ◽  
Divya Balchander ◽  
Matthew C. Erlich ◽  
Jakub K. Gocal ◽  
Wiktoria A. Gocal ◽  
...  
Keyword(s):  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
Soil Samples ◽  
Genome Sequences ◽  
Protein Coding ◽  
Content Type ◽  
Putative Protein ◽  
Protein Coding Genes

Twelve B1 cluster mycobacteriophages were isolated from soil samples collected in Philadelphia, PA, USA, using Mycobacterium smegmatis mc2 155 as a host, and were sequenced. The genome sequences range in size from 66,887 bp to 68,953 bp in length and have between 99 and 105 putative protein-coding genes.

scholarly journals Complete Genome Sequences of Escherichia coli Phages vB_EcoM-EP75 and vB_EcoP-EP335

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Joël van Mierlo ◽  
Steven Hagens ◽  
Sander Witte ◽  
Silvia Klamert ◽  
Leoni van de Straat ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Size ◽  
Shiga Toxin ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
A Genome

Phages vB_EcoM-EP75 (EP75) and vB_EcoP-EP335 (EP335) specifically infect Shiga toxin (Stx)-producing Escherichia coli (STEC) O157 strains. EP75 has a genome size of 158,143 bp and belongs to the genus Vi1virus.

scholarly journals Complete Genome Sequences of Four Brucella suis Strains Isolated from Swiss Wild Boars

2020 ◽  
Vol 9 (49) ◽  
Author(s):  
Hatice Akarsu ◽  
Isabelle Brodard ◽  
Sonja Kittl ◽  
Gudrun Overesch ◽  
Joerg Jores
Keyword(s):  
Genome Size ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Wild Boars ◽  
A Genome ◽  
Brucella Suis ◽  
Complete Genomes

ABSTRACT We present the complete genomes of four Brucella suis biovar 2 isolates that were obtained from wild boars in Switzerland in 2008 and 2009. Genomes were sequenced with PacBio technology, contained two chromosomes each, had a genome size of 3.3 Mbp, and contained more than 3,225 genes per genome.

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