scholarly journals Complete Genome Sequences of Four Brucella suis Strains Isolated from Swiss Wild Boars

2020 ◽  
Vol 9 (49) ◽  
Author(s):  
Hatice Akarsu ◽  
Isabelle Brodard ◽  
Sonja Kittl ◽  
Gudrun Overesch ◽  
Joerg Jores
Keyword(s):  
Genome Size ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Wild Boars ◽  
A Genome ◽  
Brucella Suis ◽  
Complete Genomes

ABSTRACT We present the complete genomes of four Brucella suis biovar 2 isolates that were obtained from wild boars in Switzerland in 2008 and 2009. Genomes were sequenced with PacBio technology, contained two chromosomes each, had a genome size of 3.3 Mbp, and contained more than 3,225 genes per genome.

scholarly journals Complete Genome Sequences of Vibrio cholerae-Specific Bacteriophages 24 and X29

2017 ◽  
Vol 5 (46) ◽  
Author(s):  
Sudhakar G. Bhandare ◽  
Andrew Warry ◽  
Richard D. Emes ◽  
Steven P. T. Hooton ◽  
Paul A. Barrow ◽  
...  
Keyword(s):  
Vibrio Cholerae ◽  
Genome Size ◽  
Complete Genome ◽  
Phage Therapy ◽  
Genome Sequences ◽  
Content Type ◽  
Potential Interest ◽  
Complete Genomes

ABSTRACT The complete genomes of two Vibrio cholerae bacteriophages of potential interest for cholera bacteriophage (phage) therapy were sequenced and annotated. The genome size of phage 24 is 44,395 bp encoding 71 putative proteins, and that of phage X29 is 41,569 bp encoding 68 putative proteins.

scholarly journals Complete Genome Sequences of Six Lactobacillus iners Strains Isolated from the Human Vagina

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Michael T. France ◽  
Lindsay Rutt ◽  
Shilpa Narina ◽  
Sarah Arbaugh ◽  
Elias McComb ◽  
...  
Keyword(s):  
Genome Size ◽  
Complete Genome ◽  
Vaginal Swab ◽  
Vaginal Microbiota ◽  
Genome Sequences ◽  
Content Type ◽  
A Genome ◽  
Human Vagina

Lactobacillus iners is a common member of the human vaginal microbiota, with a genome size smaller than that of other lactobacilli. Here, we report the complete genome sequences of six L. iners strains isolated from different vaginal swab specimens. Three strains were found to harbor ∼100-kbp plasmids, which were not known previously.

scholarly journals Complete Genome Sequences of Erwinia amylovora Phages vB_EamP-S2 and vB_EamM-Bue1

2018 ◽  
Vol 7 (3) ◽  
Author(s):  
Leandra E. Knecht ◽  
Yannick Born ◽  
Joël F. Pothier ◽  
Martin J. Loessner ◽  
Lars Fieseler
Keyword(s):  
Genome Size ◽  
Plant Pathogen ◽  
Complete Genome ◽  
Erwinia Amylovora ◽  
Genome Sequences ◽  
Content Type ◽  
A Genome

Phages vB_EamP-S2 (S2) and vB_EamM-Bue1 (Bue1) infect the plant pathogen Erwinia amylovora. S2 has a genome size of 45,495 bp and belongs to the genus SP6virus.

scholarly journals Complete Genome Sequences of Escherichia coli Phages vB_EcoM-EP75 and vB_EcoP-EP335

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Joël van Mierlo ◽  
Steven Hagens ◽  
Sander Witte ◽  
Silvia Klamert ◽  
Leoni van de Straat ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genome Size ◽  
Shiga Toxin ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
A Genome

Phages vB_EcoM-EP75 (EP75) and vB_EcoP-EP335 (EP335) specifically infect Shiga toxin (Stx)-producing Escherichia coli (STEC) O157 strains. EP75 has a genome size of 158,143 bp and belongs to the genus Vi1virus.

scholarly journals Complete Genome Sequences of Six Novel Macaca mulatta Papillomavirus Types Isolated from Genital Sites of Rhesus Monkeys in Hong Kong SAR, China

2018 ◽  
Vol 7 (22) ◽  
Author(s):  
Teng Long ◽  
Po Yee Wong ◽  
Wendy C. S. Ho ◽  
Robert D. Burk ◽  
Paul K. S. Chan ◽  
...  
Keyword(s):  
Hong Kong ◽  
Macaca Mulatta ◽  
Complete Genome ◽  
Rhesus Monkeys ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes ◽  
Hong Kong Sar

The complete genomes of six Macaca mulatta papillomavirus types isolated from genital sites of rhesus monkeys were characterized, and less than 72% identity with the complete L1 genes of known papillomaviruses was found. Macaca mulatta papillomavirus type 2 (MmPV2), MmPV3, and MmPV6 cluster into the genus Alphapapillomavirus, and MmPV4, MmPV5, and MmPV7 cluster into the genus Gammapapillomavirus.

scholarly journals Complete Genome Sequences of Two Human Oral Microbiome Commensals: Streptococcus salivarius ATCC 25975 and S. salivarius ATCC 27945

2017 ◽  
Vol 5 (24) ◽  
Author(s):  
Robert R. Butler ◽  
Jahna T. A. Soomer-James ◽  
Michel Frenette ◽  
Jean-François Pombert
Keyword(s):  
Complete Genome ◽  
Oral Microbiome ◽  
Streptococcus Salivarius ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes

ABSTRACT Streptococcus salivarius strains are significant contributors to the human oral microbiome. Some possess unique fimbriae that give them the ability to coaggregate and colonize particular oral structures. We present here the complete genomes of Streptococcus salivarius Lancefield K−/K+ strains ATCC 25975 and ATCC 27945, which can and cannot, respectively, produce fimbriae.

scholarly journals Complete Genome Sequences of Three Listeria monocytogenes Bacteriophage Propagation Strains

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Lauren K. Hudson ◽  
Tracey Lee Peters ◽  
Daniel W. Bryan ◽  
Yaxiong Song ◽  
Henk C. den Bakker ◽  
...  
Keyword(s):  
Listeria Monocytogenes ◽  
Complete Genome ◽  
Experimental Studies ◽  
Foodborne Pathogen ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes

ABSTRACT Bacteriophages can be used as a biocontrol for the foodborne pathogen Listeria monocytogenes. Propagation of phages is a necessary step for their use in experimental studies and biocontrol applications. Here, we present the complete genomes of three Listeria monocytogenes strains commonly used as propagation hosts for Listeria phages.

scholarly journals Complete Genome Sequences of the Escherichia coli Donor Strains ST18 and MFDpir

2020 ◽  
Vol 9 (45) ◽  
Author(s):  
Simon A. Jackson ◽  
Bridget J. Fellows ◽  
Peter C. Fineran
Keyword(s):  
Escherichia Coli ◽  
Complete Genome ◽  
Nanopore Sequencing ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli ◽  
Genetic Manipulations ◽  
Complete Genomes

ABSTRACT Escherichia coli ST18 and MFDpir are donors commonly used to transfer oriTRP4-containing plasmids to diverse bacteria via conjugation. ST18 and MFDpir were constructed via multiple genetic manipulations involving several E. coli strains. Here, we used Illumina and Nanopore sequencing to determine the complete genomes of these widely used strains.

scholarly journals Complete Genome Sequences of Two Listeria Phages of the Genus Pecentumvirus

2019 ◽  
Vol 8 (46) ◽  
Author(s):  
Tracey L. Peters ◽  
Lauren K. Hudson ◽  
Yaxiong Song ◽  
Thomas G. Denes
Keyword(s):  
Listeria Monocytogenes ◽  
Complete Genome ◽  
Foodborne Pathogen ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes

Bacteriophages isolated from environmental sources can be used as a biocontrol against the foodborne pathogen Listeria monocytogenes. Here, we present the complete genomes of LP-039 and LP-066, two Pecentumvirus bacteriophages that infect L. monocytogenes. The genome sizes of LP-039 and LP-066 are 136.2 kb and 139.0 kb, respectively.

scholarly journals Complete Genome Sequences of 47 Environmental Isolates of Escherichia coli

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Georgia Breckell ◽  
Olin K. Silander
Keyword(s):  
Escherichia Coli ◽  
Complete Genome ◽  
Environmental Isolates ◽  
Genome Sequences ◽  
Content Type ◽  
Genetic Elements ◽  
Complete Genomes

ABSTRACT Escherichia coli is commonly considered a host-associated bacterium. However, there is evidence that some strains occupy environmental (non-host-associated) niches. Here, we report the complete genomes of 47 Escherichia coli environmental isolates. These will be useful for understanding the dynamics of plasmids, phages, and other repetitive genetic elements.

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