scholarly journals Draft Genome Assemblies of Two Cryptosporidium hominis Isolates from New Zealand

2021 ◽  
Vol 10 (26) ◽  
Author(s):  
M. A. Knox ◽  
J. C. Garcia-R ◽  
D. T. S. Hayman
Keyword(s):  
New Zealand ◽  
Gastrointestinal Disease ◽  
Draft Genome ◽  
Protozoan Parasite ◽  
Clinical Isolates ◽  
Whole Genome ◽  
Genome Sequences ◽  
Cryptosporidium Hominis ◽  
Content Type ◽  
Genome Assemblies

Cryptosporidium hominis is a protozoan parasite that causes gastrointestinal disease in humans worldwide. Here, we report on draft whole-genome sequences of two clinical isolates of C. hominis that were purified from patients with cryptosporidiosis in New Zealand.

scholarly journals Whole-Genome Sequences of Corynebacterium macginleyi CCUG 32361T and Clinical Isolates NML 080212 and NML 120205

2018 ◽  
Vol 7 (23) ◽  
Author(s):  
Anne-Marie Bernier ◽  
Kathryn Bernard
Keyword(s):  
Draft Genome ◽  
Clinical Isolates ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type

Draft genome sequences of Corynebacterium macginleyi CCUG 32361T and clinical isolates NML 080212 and NML 120205 were assembled and studied. Genome sizes ranged from 2.35 Mb to 2.42 Mb, with G+C contents ranging from 57.1% to 57.2%.

scholarly journals Eight Whole-Genome Assemblies of Yersinia pestis subsp. microtus bv. caucasica Isolated from the Common Vole (Microtus arvalis) Plague Focus in Dagestan, Russia

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Angelina A. Kislichkina ◽  
Aleksandr G. Bogun ◽  
Lidiya A. Kadnikova ◽  
Nadezhda V. Maiskaya ◽  
Viktor I. Solomentsev ◽  
...  
Keyword(s):  
Yersinia Pestis ◽  
Draft Genome ◽  
Common Vole ◽  
Whole Genome ◽  
Microtus Arvalis ◽  
Genome Sequences ◽  
Content Type ◽  
The Common ◽  
Common Voles ◽  
Genome Assemblies

ABSTRACT We here report the draft genome sequences of 8 Yersinia pestis subsp. microtus bv. caucasica strains isolated from the East Caucasian (previous name, Dagestan) mountain focus (no. 39), representing the most ancient branch of the 0.PE2 phylogroup circulating in populations of common voles (Microtus arvalis).

scholarly journals Whole-Genome Assemblies for Two Yersinia pestis Strains Isolated in Mongolia

2020 ◽  
Vol 9 (41) ◽  
Author(s):  
Muzi Jin ◽  
B. Byambajav ◽  
Hongyuan Zheng ◽  
Yufei Chen ◽  
B. Natsagdorj ◽  
...  
Keyword(s):  
Yersinia Pestis ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Genome Assemblies

ABSTRACT Here, we report the draft genome sequences of two Yersinia pestis bv. Antiqua strains, belonging to the 3.ANT phylogroup, that were isolated in Mongolia and were circulating in marmot populations.

scholarly journals Draft Genome Assembly of a Potentially Zoonotic Cryptosporidium parvum Isolate, UKP1

2018 ◽  
Vol 7 (19) ◽  
Author(s):  
John H. E. Nash ◽  
James Robertson ◽  
Kristin Elwin ◽  
Rachel A. Chalmers ◽  
Andrew M. Kropinski ◽  
...  
Keyword(s):  
Cryptosporidium Parvum ◽  
Gastrointestinal Disease ◽  
Draft Genome ◽  
Small Ruminants ◽  
Protozoan Parasite ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Draft Genome Assembly ◽  
Animal Reservoirs

Cryptosporidium parvum is a zoonotic protozoan parasite that causes food and waterborne gastrointestinal disease and whose major animal reservoirs are cattle and small ruminants. We report here on a draft whole-genome sequence of a zoonotic isolate of C. parvum isolated from a person with cryptosporidiosis.

scholarly journals Whole-Genome Assemblies for Three Yersinia pestis Strains Isolated in Erenhot, China

2020 ◽  
Vol 9 (45) ◽  
Author(s):  
Jing Wang ◽  
Xifeng Yang ◽  
Hongyuan Zheng ◽  
Li Tian ◽  
Qi Shi ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Yersinia Pestis ◽  
Draft Genome ◽  
Meriones Unguiculatus ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Genome Assemblies

ABSTRACT To explore the genetic diversity of Yersinia pestis strains in Erenhot, China, and their relationship with Mongolian strains, we collected and sequenced three Y. pestis strains from Erenhot, China, in 2018. Here, we report the draft genome sequences of three Y. pestis bv. Medievalis strains belonging to the 2.MED phylogroup that were circulating in Meriones unguiculatus populations.

scholarly journals Draft Genome Sequences of Xylella fastidiosa subsp. fastidiosa Strains OK3, VB11, and NOB1, Isolated from Bunch and Muscadine Grapes Grown in Southern Mississippi

2020 ◽  
Vol 9 (25) ◽  
Author(s):  
Olga V. Mavrodi ◽  
Dmitri V. Mavrodi ◽  
Eric T. Stafne ◽  
John J. Adamczyk ◽  
Ebrahiem M. Babiker
Keyword(s):  
Xylella Fastidiosa ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
High Quality ◽  
Content Type ◽  
Muscadine Grape ◽  
Genome Assemblies ◽  
Muscadine Grapes

ABSTRACT We report here high-quality draft whole-genome assemblies of Xylella fastidiosa subsp. fastidiosa strains OK3, VB11, and NOB1, which were isolated from symptomatic bunch and muscadine grape plants grown in southern Mississippi.

scholarly journals Draft Genome Sequences of Two Sporothrix schenckii Clinical Isolates Associated with Human Sporotrichosis in Colombia

2018 ◽  
Vol 6 (24) ◽  
Author(s):  
Oscar M. Gomez ◽  
Laura C. Alvarez ◽  
Jose F. Muñoz ◽  
Elizabeth Misas ◽  
Juan E. Gallo ◽  
...  
Keyword(s):  
Fungal Pathogen ◽  
Draft Genome ◽  
Sporothrix Schenckii ◽  
Sensu Stricto ◽  
Clinical Isolates ◽  
Similarity Analysis ◽  
Whole Genome ◽  
Genome Sequences ◽  
High Genetic Diversity ◽  
Content Type

ABSTRACT Sporothrix schenckii is a thermodimorphic fungal pathogen with a high genetic diversity. In this work, we present the assembly and similarity analysis of the whole-genome sequences of two clinical isolates from Colombia of S. schenckii sensu stricto.

scholarly journals Draft Whole-Genome Sequences of Three Diarrheagenic Escherichia coli Strains Isolated from Farmed Deer in New Zealand

2018 ◽  
Vol 6 (16) ◽  
pp. e00300-18
Author(s):  
A. Springer Browne ◽  
Patrick J. Biggs ◽  
Alice Elliott ◽  
Patricia Jaros ◽  
Nigel P. French ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
New Zealand ◽  
Cervus Elaphus ◽  
Red Deer ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli ◽  
Diarrheagenic Escherichia Coli

ABSTRACT Escherichia coli bacteria commonly colonize the gastrointestinal tracts of farmed ruminants. Cattle are a well-recognized reservoir of zoonotic E. coli; we report here, however, the draft genome sequences of three diarrheagenic E. coli strains isolated from farmed red deer (Cervus elaphus) in the Manawatu region of New Zealand.

scholarly journals Six Whole-Genome Assemblies of Yersinia pestis subsp. microtus bv. ulegeica (Phylogroup 0.PE5) Strains Isolated from Mongolian Natural Plague Foci

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Angelina A. Kislichkina ◽  
Alexandr G. Bogun ◽  
Lidiya A. Kadnikova ◽  
Nadezhda V. Maiskaya ◽  
Viktor I. Solomentsev ◽  
...  
Keyword(s):  
Yersinia Pestis ◽  
Draft Genome ◽  
Whole Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Genome Assemblies

ABSTRACT Here, we report the draft genome sequences of six Yersinia pestis subsp. microtus bv. ulegeica strains isolated from the territory of Mongolia and representing the 0.PE5 phylogroup circulating in populations of voles and picas.

scholarly journals Fourteen Draft Genome Sequences for the First Reported Cases of Azithromycin-Resistant Neisseria gonorrhoeae in Ireland

2017 ◽  
Vol 5 (23) ◽  
Author(s):  
Micheál Mac Aogáin ◽  
Nicholas Fennelly ◽  
Anne Walsh ◽  
Yvonne Lynagh ◽  
Michaël Bekaert ◽  
...  
Keyword(s):  
Neisseria Gonorrhoeae ◽  
Draft Genome ◽  
Sequence Type ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type ◽  
Resistant Strains ◽  
Genome Assemblies

ABSTRACT Here, we report the draft genome assemblies of 14 azithromycin-resistant Neisseria gonorrhoeae clinical isolates, representing the first such strains identified in Ireland. Among these isolates are the first reported highly resistant strains (MIC >256 mg/liter), which both belonged to the ST1580 sequence type.

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