scholarly journals Draft Genome Sequence of Streptococcus anginosus UMB7768, Isolated from a Woman with Recurrent UTI Symptoms

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Sarah Miller ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Urinary Tract Infections ◽  
Genome Sequence ◽  
Draft Genome ◽  
Urogenital Tract ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Streptococcus Anginosus ◽  
Recurrent Uti ◽  
Tract Infections

ABSTRACT Streptococcus anginosus recently was implicated as a pathogen involved in urinary tract infections. A strain of S. anginosus was isolated from the female urogenital tract. Here, we present the draft genome sequence of S. anginosus strain UMB7768.

scholarly journals Draft Genome Sequence of Klebsiella pneumoniae UMB7779, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Pavan Bhimalli ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Klebsiella Pneumoniae ◽  
Urinary Tract Infections ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Recurrent Uti ◽  
Tract Infections ◽  
Female Urinary Tract

Klebsiella pneumoniae is a pathogenic bacterium commonly responsible for urinary tract infections (UTIs). Here, we report the draft genome sequence of K. pneumoniae strain UMB7779, isolated from catheterized urine of a woman with a recurrent UTI.

scholarly journals Draft Genome Sequence of Streptococcus anginosus UMB1296, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Sara Temelkova ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Streptococcus Anginosus ◽  
Protein Coding Genes ◽  
Female Urinary Tract

We present the draft genome sequence of a Streptococcus anginosus strain isolated from the female urinary tract. The S. anginosus UMB1296 draft genome has a size of 1,924,009 bp assembled into 35 contigs with a GC content of 38.69%. Genome annotation revealed 1,775 protein-coding genes, including several known virulence factors.

scholarly journals Draft Genome Sequence of Streptococcus anginosus UMB0839, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Thomas Scott ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Total Size ◽  
Genome Coverage ◽  
Content Type ◽  
Streptococcus Anginosus ◽  
Female Urinary Tract

ABSTRACT Here, we present the draft genome sequence of Streptococcus anginosus UMB0839, isolated from the female urinary tract. The total size of the genome is 2,104,786 bp assembled into 42 contigs with a GC content of 38.8% and 284× genome coverage.

scholarly journals Draft Genome Sequence and Gene Annotation of the Uropathogenic Bacterium Proteus mirabilis Pr2921

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
F. M. Giorello ◽  
V. Romero ◽  
J. Farias ◽  
P. Scavone ◽  
A. Umpiérrez ◽  
...  
Keyword(s):  
Urinary Tract ◽  
Urinary Tract Infections ◽  
Genome Sequence ◽  
Proteus Mirabilis ◽  
Gene Annotation ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Tract Infections ◽  
Related Proteins ◽  
Fimbrial Protein

Here, we report the genome sequence of Proteus mirabilis Pr2921, a uropathogenic bacterium that can cause severe complicated urinary tract infections. After gene annotation, we identified two additional copies of ucaA , one of the most studied fimbrial protein genes, and other fimbriae related-proteins that are not present in P. mirabilis HI4320.

scholarly journals Draft Genome Sequence of Lactobacillus crispatus UMB1163, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Fabeiha Khan ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Positive Bacterium ◽  
Gram Positive ◽  
Vaginal Infections ◽  
Content Type ◽  
Lactobacillus Crispatus ◽  
Female Urinary Tract

ABSTRACT Lactobacillus crispatus is a Gram-positive bacterium shown to protect against urinary and vaginal infections. Here, we report the draft genome sequence of L. crispatus UMB1163, isolated from the female urinary tract.

scholarly journals Draft Genome Sequence of Corynebacterium aurimucosum UMB7769, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Samantha Eskandar ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Antibiotic Resistance ◽  
Urinary Tract ◽  
Genome Sequence ◽  
Resistance Genes ◽  
Draft Genome ◽  
Gc Content ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Female Urinary Tract

ABSTRACT Here, we present the draft genome sequence of Corynebacterium aurimucosum UMB7769, isolated from the female urinary tract. The size of the genome is 2,731,818 bp, assembled in 50 contigs, with an observed GC content of 60.9% and an N50 score of 129,518 bp. Annotation revealed 31 antibiotic resistance genes.

scholarly journals Draft Genome Sequence of Staphylococcus epidermidis UMB7765, Isolated from the Urobiome of a Woman with Recurrent Urinary Tract Infection

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Lucy Kemper ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract Infection ◽  
Urinary Tract ◽  
Tract Infection ◽  
Urinary Tract Infections ◽  
Staphylococcus Epidermidis ◽  
Recurrent Urinary Tract Infection ◽  
Draft Genome ◽  
Positive Bacterium ◽  
Content Type ◽  
Tract Infections

Staphylococcus epidermidis is a Gram-positive bacterium that is resistant to many antibiotics. Here, we present the 2.5-Mb draft genome of S. epidermidis UMB7765, isolated from a voided urine sample from a female with recurrent urinary tract infections.

scholarly journals Draft Genome Sequence of Klebsiella pneumoniae UMB8492, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Suma Gondi ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Overactive Bladder ◽  
Klebsiella Pneumoniae ◽  
Female Patient ◽  
Urine Sample ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Female Urinary Tract

Here, we present the draft genome sequence for Klebsiella pneumoniae strain UMB8492, isolated from a urine sample from a female patient with overactive bladder (OAB) symptoms. The assembled genome has a length of 5,660,575 bp, a G+C content of 57.19%, and an N 50 value of 136,315 bp.

scholarly journals Draft Genome Sequence of Proteus mirabilis Strain UMB0038, Isolated from the Female Bladder

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Noreen Gallian ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Genome Sequence ◽  
Proteus Mirabilis ◽  
Lower Urinary Tract ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Urinary Tract Symptoms ◽  
Female Bladder ◽  
Lower Urinary

ABSTRACT Proteus mirabilis is a Gram-negative motile and rod-shaped bacterium that is a common pathogen of the urinary tract. Here, we report the draft genome sequence of P. mirabilis UMB0038, which was isolated from a woman without lower urinary tract symptoms.

scholarly journals Draft Genome Sequence of an Escherichia coli Sequence Type 420 Isolate from a Patient with Urinary Tract Infection in Northern California

2020 ◽  
Vol 9 (23) ◽  
Author(s):  
Yusuke Matsui ◽  
Yuan Hu ◽  
Nicole J. Tarlton ◽  
Lee W. Riley
Keyword(s):  
Escherichia Coli ◽  
Urinary Tract Infection ◽  
Urinary Tract ◽  
Tract Infection ◽  
Genome Sequence ◽  
Draft Genome ◽  
Sequence Type ◽  
Draft Genome Sequence ◽  
Northern California ◽  
Content Type

ABSTRACT The genome sequence of a uropathogenic Escherichia coli sequence type 420 strain isolated from a patient with urinary tract infection in northern California is described here. The draft genome sequence includes a 4.8-Mb chromosome, accompanied by a 114-kb plasmid containing IncFIB/IncFII/Col156 and a 35-kb plasmid containing IncN3.

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