scholarly journals Genome Sequences of Bacteria Associated with the Diatom Cyclotella cryptica Strain CCMP332

2020 ◽  
Vol 9 (46) ◽  
Author(s):  
Cory B. Gargas ◽  
Wade R. Roberts ◽  
Andrew J. Alverson
Keyword(s):  
Bacterial Strains ◽  
Genome Sequences ◽  
Cyclotella Cryptica

ABSTRACT We report draft genomes of two bacterial strains in the genera Hyphobacterium and Reichenbachiella, which are associated with the diatom Cyclotella cryptica strain CCMP332. Genomes from these strains were 2,691,501 bp and 3,325,829 bp, respectively, and will be useful for understanding interactions between diatoms and bacteria.

scholarly journals Complete Genome Sequences of Five Burkholderia Strains with Biocontrol Activity against Various Lettuce Pathogens

2022 ◽  
Author(s):  
Adrien Biessy ◽  
Marie Ciotola ◽  
Mélanie Cadieux ◽  
Daphné Albert ◽  
Martin Filion
Keyword(s):  
Complete Genome ◽  
Burkholderia Cepacia ◽  
Gene Clusters ◽  
Antimicrobial Compounds ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Biosynthetic Gene Clusters ◽  
Content Type ◽  
Biocontrol Activity ◽  
Complex Display

Numerous bacterial strains from the Burkholderia cepacia complex display biocontrol activity. Here, we report the complete genome sequences of five Burkholderia strains isolated from soil. Biosynthetic gene clusters responsible for the production of antimicrobial compounds were found in the genome of these strains, which display biocontrol activity against various lettuce pathogens.

scholarly journals Draft Genome Sequences of Two Bacterial Strains, Muricauda sp. 72 and NH166, Isolated from the South China Sea and West Pacific Ocean

2019 ◽  
Vol 8 (44) ◽  
Author(s):  
Ying Zheng ◽  
Cong Sun
Keyword(s):  
Pacific Ocean ◽  
South China Sea ◽  
South China ◽  
The South China Sea ◽  
Bacterial Strains ◽  
The South ◽  
Genome Sequences ◽  
West Pacific ◽  
China Sea ◽  
West Pacific Ocean

Here, we report the whole-genome sequences of two bacterial strains, Muricauda sp. 72 and NH166, isolated from the South China Sea and West Pacific Ocean, respectively. These two strains may represent a novel species of the genus Muricauda, and the features of their genome sequences will enrich our understandings of strains in the genus Muricauda.

scholarly journals Draft Genome Sequences of 14 Lactobacillus, Enterococcus, and Staphylococcus Isolates from the Nasopharynx of Healthy Feedlot Cattle

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Samat Amat ◽  
Devin B. Holman ◽  
Edouard Timsit ◽  
Katherine E. Gzyl ◽  
Trevor W. Alexander
Keyword(s):  
Draft Genome ◽  
Feedlot Cattle ◽  
Enterococcus Hirae ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type

Here, we present the first draft genome sequences of 14 bacterial strains isolated from the nasopharynx of healthy feedlot cattle. These genomes are from 12 Lactobacillus isolates (L. amylovorus, L. buchneri, L. curvatus, and L. paracasei), 1 Enterococcus hirae isolate, and 1 Staphylococcus chromogenes isolate.

scholarly journals Draft Genome Sequences of 18 Psychrotolerant and 2 Thermotolerant Strains Representative of Particular Ecotypes in the Bacillus cereus Group

2017 ◽  
Vol 5 (5) ◽  
Author(s):  
Marie-Hélène Guinebretière ◽  
Valentin Loux ◽  
Véronique Martin ◽  
Pierre Nicolas ◽  
Vincent Sanchis ◽  
...  
Keyword(s):  
Bacillus Cereus ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Bacillus Cereus Group ◽  
Content Type ◽  
Physiological Diversity

ABSTRACT Bacteria from the Bacillus cereus group exhibit genetic and physiological diversity through different ecotypes. Here, we present the draft genome sequences of 20 bacterial strains belonging to the contrasted psychrotolerant and thermotolerant ecotypes.

scholarly journals Draft Genome Sequences of Four Bacterial Strains Isolated from a Polymicrobial Culture of Naked (N-Type) Emiliania huxleyi CCMP1516: TABLE 1 

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Fabini D. Orata ◽  
Albert Remus R. Rosana ◽  
Yue Xu ◽  
Danielle N. Simkus ◽  
Anna R. Bramucci ◽  
...  
Keyword(s):  
Draft Genome ◽  
Emiliania Huxleyi ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Symbiotic Interactions ◽  
By Products

Strains of Sulfitobacter spp., Erythrobacter sp., and Marinobacter sp. were isolated from a polymicrobial culture of the naked (N-type) haptophyte Emiliania huxleyi strain CCMP1516. The genomes encode genes for the production of phytohormones, vitamins, and the consumption of their hosts’ metabolic by-products, suggesting symbiotic interactions within this polymicrobial culture.

scholarly journals Draft Genome Sequences of Two Streptomyces Strains, MZ03-37T and MZ03-48, Isolated from Lava Tube Speleothems

2020 ◽  
Vol 9 (25) ◽  
Author(s):  
Jose L. Gonzalez-Pimentel ◽  
Valme Jurado ◽  
Bernardo Hermosin ◽  
Cesareo Saiz-Jimenez
Keyword(s):  
Canary Islands ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Lava Tube ◽  
Genome Sequences ◽  
La Palma ◽  
Genomic Analyses

ABSTRACT Two Streptomyces strains were isolated from a lava tube in La Palma, Canary Islands. Genomic analyses suggest that the two strains could belong to the same species. Here, we report the draft genomes for these bacterial strains.

scholarly journals New Reference Genome Sequences for 17 Bacterial Strains of the Honey Bee Gut Microbiota

2018 ◽  
Vol 7 (3) ◽  
Author(s):  
Kirsten M. Ellegaard ◽  
Philipp Engel
Keyword(s):  
Gut Microbiota ◽  
Honey Bee ◽  
Honey Bees ◽  
Reference Genome ◽  
Reference Database ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type ◽  
Future Analysis ◽  
Comprehensive Reference

We sequenced the genomes of 17 strains isolated from the gut of honey bees, including strains representing the genera Lactobacillus, Bifidobacterium, Gilliamella, Snodgrassella, Frischella, and Commensalibacter. These genome sequences represent an important step forward in the development of a comprehensive reference database to aid future analysis of this emerging gut microbiota model.

scholarly journals Isolation and Whole-Genome Sequencing of 12 Mushroom-Associated Bacterial Strains: an Inquiry-Based Laboratory Exercise in a Genomics Course at the Rochester Institute of Technology

2020 ◽  
Vol 9 (6) ◽  
Author(s):  
Narayan H. Wong ◽  
Andrew J. Rosato ◽  
Yara M. Rose ◽  
Trevor S. Penix ◽  
Janice B. Fung ◽  
...  
Keyword(s):  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Life Sciences ◽  
Whole Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Mushroom Species ◽  
Laboratory Exercise ◽  
Rochester Institute Of Technology ◽  
Institute Of Technology

Here, we report the isolation, identification, and whole-genome sequences of 12 bacterial strains associated with four mushroom species. The study was done as an inquiry-based exercise in an undergraduate genomics course (BIOL 340) in the Thomas H. Gosnell School of Life Sciences at the Rochester Institute of Technology.

scholarly journals Draft Genome Sequences of 13 Plant-Associated Actinobacteria of the Family Microbacteriaceae

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Sergey V. Tarlachkov ◽  
Irina P. Starodumova ◽  
Lubov V. Dorofeeva ◽  
Natalia V. Prisyazhnaya ◽  
Semen A. Leyn ◽  
...  
Keyword(s):  
Molecular Interactions ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Illumina Technology ◽  
The Family

ABSTRACT Draft genome sequences of 13 bacterial strains from the family Microbacteriaceae were generated using Illumina technology. The genome sizes varied from 3.0 to 4.8 Mb, and the DNA G+C content was 68.1 to 72.5%. The sequences obtained will contribute to the development of genome-based taxonomy and understanding of molecular interactions between bacteria and plants.

scholarly journals Genome Sequences of the First WHO Repository of Platelet Transfusion-Relevant Bacterial Reference Strains

2017 ◽  
Vol 5 (29) ◽  
Author(s):  
Alexander Mellmann ◽  
Eva Spindler-Raffel ◽  
Stefan Bletz ◽  
Marcel Prax ◽  
Isabelle Bekeredjian-Ding
Keyword(s):  
Platelet Transfusion ◽  
Draft Genome ◽  
Blood Platelet ◽  
Platelet Concentrates ◽  
Blood Safety ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Reference Strains

ABSTRACT To develop novel techniques for improving blood safety, dedicated bacterial strains, which are able to persist and to proliferate in blood platelet concentrates, are needed. Here, we present draft genome sequences of the four bacterial strains approved for the first WHO repository of platelet transfusion-relevant bacterial reference strains.

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