scholarly journals Draft Genome Sequences of 14 Lactobacillus, Enterococcus, and Staphylococcus Isolates from the Nasopharynx of Healthy Feedlot Cattle

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Samat Amat ◽  
Devin B. Holman ◽  
Edouard Timsit ◽  
Katherine E. Gzyl ◽  
Trevor W. Alexander
Keyword(s):  
Draft Genome ◽  
Feedlot Cattle ◽  
Enterococcus Hirae ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type

Here, we present the first draft genome sequences of 14 bacterial strains isolated from the nasopharynx of healthy feedlot cattle. These genomes are from 12 Lactobacillus isolates (L. amylovorus, L. buchneri, L. curvatus, and L. paracasei), 1 Enterococcus hirae isolate, and 1 Staphylococcus chromogenes isolate.

scholarly journals Draft Genome Sequences of 18 Psychrotolerant and 2 Thermotolerant Strains Representative of Particular Ecotypes in the Bacillus cereus Group

2017 ◽  
Vol 5 (5) ◽  
Author(s):  
Marie-Hélène Guinebretière ◽  
Valentin Loux ◽  
Véronique Martin ◽  
Pierre Nicolas ◽  
Vincent Sanchis ◽  
...  
Keyword(s):  
Bacillus Cereus ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Bacillus Cereus Group ◽  
Content Type ◽  
Physiological Diversity

ABSTRACT Bacteria from the Bacillus cereus group exhibit genetic and physiological diversity through different ecotypes. Here, we present the draft genome sequences of 20 bacterial strains belonging to the contrasted psychrotolerant and thermotolerant ecotypes.

scholarly journals Draft Whole-Genome Sequences of Multidrug-Resistant Escherichia coli O157:H7 Strains Isolated from Feedlot Cattle Treated with Growth-Promoting Agents

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Muhammad A. Rehman ◽  
Catherine Carrillo ◽  
François Malouin ◽  
Moussa S. Diarra
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Feedlot Cattle ◽  
Genome Sequences ◽  
Antibiotic Resistant ◽  
Content Type ◽  
E Coli ◽  
Foodborne Outbreaks ◽  
Uremic Syndrome

ABSTRACT Enterohemorrhagic Escherichia coli serotype O157:H7 is a major cause of foodborne outbreaks and hemolytic-uremic syndrome. Here, we report the draft genome sequences of three antibiotic-resistant E. coli O157:H7 strains isolated from feedlot cattle. These draft genome sequences will aid in the development of sequence-based tools for the detection of virulence and antimicrobial resistance genotypes.

scholarly journals Draft Genome Sequences of 10 Bacterial Strains Isolated from Root Nodules of Alnus Trees in New Hampshire

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Ian Davis ◽  
Joseph Sevigny ◽  
Victoria Kleiner ◽  
Kelsey Mercurio ◽  
Céline Pesce ◽  
...  
Keyword(s):  
New Hampshire ◽  
Root Nodules ◽  
Draft Genome ◽  
Plant Health ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type ◽  
Functional Roles

Here, we report the draft genome sequences obtained for 10 bacterial strains isolated from root nodules of Alnus trees. These members of the nodule microbiome were sequenced to determine their potential functional roles in plant health. The selected strains belong to the genera Rhodococcus, Kocuria, Rothia, Herbaspirillum, Streptomyces, and Thiopseudomonas.

scholarly journals Draft Genome Sequences of 12 Histophilus somni Strains Isolated from Feedlot Cattle in Alberta, Canada

2019 ◽  
Vol 8 (46) ◽  
Author(s):  
Mohammad Mostafa Nazari ◽  
Krishna Bhatt ◽  
Neil Rawlyk ◽  
Andrew A. Potter ◽  
Karen Liljebjelke
Keyword(s):  
Respiratory Disease ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Feedlot Cattle ◽  
Genome Sequences ◽  
Gram Negative ◽  
Content Type ◽  
Histophilus Somni

Histophilus somni is a Gram-negative opportunistic pathogen associated with respiratory disease in cattle. Here, we report the draft genome sequences of 12 Histophilus somni strains isolated from feedlot cattle in Alberta, Canada, which were diagnosed with respiratory disease.

scholarly journals Draft Genome Sequences of Three Amino Acid-Secreting Lactococcus lactis Strains

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Jhonatan A. Hernandez-Valdes ◽  
Anne de Jong ◽  
Jan Kok ◽  
Oscar P. Kuipers
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
Glutamic Acid ◽  
Lactococcus Lactis ◽  
Food Industry ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type ◽  
Acid Secreting

Three Lactococcus lactis strains with the ability to secrete various amino acids (leucine, isoleucine, methionine, valine, glutamic acid, and histidine) were sequenced in order to identify the mechanisms involved in the secretion. Amino acids contribute to flavor formation; therefore, bacterial strains with this ability are relevant for the food industry.

scholarly journals Draft Genome Sequences of Enterohemorrhagic Escherichia coli O103:H2 Strains Isolated from Feces of Feedlot Cattle

2017 ◽  
Vol 5 (19) ◽  
Author(s):  
Lance W. Noll ◽  
Jay N. Worley ◽  
Xun Yang ◽  
Pragathi B. Shridhar ◽  
Jianfa Bai ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Genomic Analysis ◽  
Feedlot Cattle ◽  
Enterohemorrhagic Escherichia Coli ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli ◽  
Virulence Potential ◽  
A Minor

ABSTRACT The enterohemorrhagic pathotype represents a minor proportion of the Escherichia coli O103 strains shed in the feces of cattle. We report here the genome sequences of 43 strains of enterohemorrhagic E. coli (EHEC) O103:H2 isolated from feedlot cattle feces. The genomic analysis will provide information on the genetic diversity and virulence potential of bovine EHEC O103.

scholarly journals Draft Genome Sequences of Two Boron-Tolerant, Arsenic-Resistant, Gram-Positive Bacterial Strains, Lysinibacillus sp. OL1 and Enterococcus sp. OL5, Isolated from Boron-Fortified Cauliflower-Growing Field Soils of Northern West Bengal, India

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Subhajit Sen ◽  
Tilak Saha ◽  
Sabyasachi Bhattacharya ◽  
Nidhi ◽  
Nibendu Mondal ◽  
...  
Keyword(s):  
West Bengal ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Boron Tolerance ◽  
Gram Positive ◽  
Content Type ◽  
Field Soils

Two novel boron-tolerant, arsenic-resistant, Gram-positive bacterial strains, Lysinibacillus sp. OL1 and Enterococcus sp. OL5, were isolated from boron fertilizer-amended cauliflower plantation field soils in India. Here, we report the draft genome sequences of OL1 (4.87 Mb) and OL5 (3.93 Mb) to explore the intricacies of boron tolerance in bacteria.

scholarly journals Draft Genome Sequences of Bacterial Strains Capable of Degrading Ulvan from the Green Alga Ulva ohnoi

2020 ◽  
Vol 9 (3) ◽  
Author(s):  
Ratna Mondal ◽  
Miho Satoh ◽  
Kouhei Ohnishi
Keyword(s):  
Carbon Source ◽  
Green Alga ◽  
Sole Carbon Source ◽  
Draft Genome ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Degradation ◽  
Ulva Ohnoi

We present here the draft genome sequences of four marine bacterial strains which can use ulvan as their sole carbon source. We used ulvan extracted from the green alga Ulva ohnoi. Each bacterium contains a polysaccharide-utilizing locus, which is necessary for the complete degradation of ulvan.

scholarly journals Draft Genome Sequences of Enteropathogenic Escherichia coli O103 Strains Isolated from Feces of Feedlot Cattle

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Lance W. Noll ◽  
Jay N. Worley ◽  
Xun Yang ◽  
Pragathi B. Shridhar ◽  
Jianfa Bai ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Genetic Diversity ◽  
Draft Genome ◽  
Feedlot Cattle ◽  
Enteropathogenic Escherichia Coli ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli ◽  
Virulence Potential ◽  
A Minor

ABSTRACT Enteropathogenic Escherichia coli (EPEC) pathotype represents a minor proportion of E. coli O103 strains shed in the feces of feedlot cattle. The draft genome sequences of 13 strains of EPEC O103 are reported here. The availability of the genome sequences will help in the assessment of genetic diversity and virulence potential of bovine EPEC O103.

scholarly journals Draft Genome Sequences of Pseudomonas sp. Strain 382 and Pantoea coffeiphila 342, Endophytic Bacteria Isolated from Brazilian Guarana [Paullinia cupana (Mart.) Ducke]

2018 ◽  
Vol 6 (16) ◽  
pp. e00287-18
Author(s):  
Kátia Aparecida de Siqueira ◽  
Rhavena Graziela Liotti ◽  
Tiago Antônio de Oliveira Mendes ◽  
Marcos Antônio Soares
Keyword(s):  
Endophytic Bacteria ◽  
Draft Genome ◽  
Gc Content ◽  
Pseudomonas Sp ◽  
Bacterial Strains ◽  
Genome Sequences ◽  
Content Type ◽  
Paullinia Cupana

ABSTRACT Pseudomonas sp. strain 382 and Pantoea coffeiphila 342 are two endophytic bacterial strains isolated from Paullinia cupana (guarana) seeds. Their draft genome sizes were 5.96 and 6.38 Mbp, with 315 and 266 scaffolds and 52% and 62% GC content, respectively.

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