scholarly journals Complete Genome Sequences of Six Novel Macaca mulatta Papillomavirus Types Isolated from Genital Sites of Rhesus Monkeys in Hong Kong SAR, China

2018 ◽  
Vol 7 (22) ◽  
Author(s):  
Teng Long ◽  
Po Yee Wong ◽  
Wendy C. S. Ho ◽  
Robert D. Burk ◽  
Paul K. S. Chan ◽  
...  
Keyword(s):  
Hong Kong ◽  
Macaca Mulatta ◽  
Complete Genome ◽  
Rhesus Monkeys ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes ◽  
Hong Kong Sar

The complete genomes of six Macaca mulatta papillomavirus types isolated from genital sites of rhesus monkeys were characterized, and less than 72% identity with the complete L1 genes of known papillomaviruses was found. Macaca mulatta papillomavirus type 2 (MmPV2), MmPV3, and MmPV6 cluster into the genus Alphapapillomavirus, and MmPV4, MmPV5, and MmPV7 cluster into the genus Gammapapillomavirus.

scholarly journals Complete Genome Sequences of Two Human Oral Microbiome Commensals: Streptococcus salivarius ATCC 25975 and S. salivarius ATCC 27945

2017 ◽  
Vol 5 (24) ◽  
Author(s):  
Robert R. Butler ◽  
Jahna T. A. Soomer-James ◽  
Michel Frenette ◽  
Jean-François Pombert
Keyword(s):  
Complete Genome ◽  
Oral Microbiome ◽  
Streptococcus Salivarius ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes

ABSTRACT Streptococcus salivarius strains are significant contributors to the human oral microbiome. Some possess unique fimbriae that give them the ability to coaggregate and colonize particular oral structures. We present here the complete genomes of Streptococcus salivarius Lancefield K−/K+ strains ATCC 25975 and ATCC 27945, which can and cannot, respectively, produce fimbriae.

scholarly journals Complete Genome Sequences of Vibrio cholerae-Specific Bacteriophages 24 and X29

2017 ◽  
Vol 5 (46) ◽  
Author(s):  
Sudhakar G. Bhandare ◽  
Andrew Warry ◽  
Richard D. Emes ◽  
Steven P. T. Hooton ◽  
Paul A. Barrow ◽  
...  
Keyword(s):  
Vibrio Cholerae ◽  
Genome Size ◽  
Complete Genome ◽  
Phage Therapy ◽  
Genome Sequences ◽  
Content Type ◽  
Potential Interest ◽  
Complete Genomes

ABSTRACT The complete genomes of two Vibrio cholerae bacteriophages of potential interest for cholera bacteriophage (phage) therapy were sequenced and annotated. The genome size of phage 24 is 44,395 bp encoding 71 putative proteins, and that of phage X29 is 41,569 bp encoding 68 putative proteins.

scholarly journals Complete Genome Sequences of Three Listeria monocytogenes Bacteriophage Propagation Strains

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Lauren K. Hudson ◽  
Tracey Lee Peters ◽  
Daniel W. Bryan ◽  
Yaxiong Song ◽  
Henk C. den Bakker ◽  
...  
Keyword(s):  
Listeria Monocytogenes ◽  
Complete Genome ◽  
Experimental Studies ◽  
Foodborne Pathogen ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes

ABSTRACT Bacteriophages can be used as a biocontrol for the foodborne pathogen Listeria monocytogenes. Propagation of phages is a necessary step for their use in experimental studies and biocontrol applications. Here, we present the complete genomes of three Listeria monocytogenes strains commonly used as propagation hosts for Listeria phages.

scholarly journals Complete Genome Sequences of the Escherichia coli Donor Strains ST18 and MFDpir

2020 ◽  
Vol 9 (45) ◽  
Author(s):  
Simon A. Jackson ◽  
Bridget J. Fellows ◽  
Peter C. Fineran
Keyword(s):  
Escherichia Coli ◽  
Complete Genome ◽  
Nanopore Sequencing ◽  
Genome Sequences ◽  
Content Type ◽  
E Coli ◽  
Genetic Manipulations ◽  
Complete Genomes

ABSTRACT Escherichia coli ST18 and MFDpir are donors commonly used to transfer oriTRP4-containing plasmids to diverse bacteria via conjugation. ST18 and MFDpir were constructed via multiple genetic manipulations involving several E. coli strains. Here, we used Illumina and Nanopore sequencing to determine the complete genomes of these widely used strains.

scholarly journals Complete Genome Sequences of Two Listeria Phages of the Genus Pecentumvirus

2019 ◽  
Vol 8 (46) ◽  
Author(s):  
Tracey L. Peters ◽  
Lauren K. Hudson ◽  
Yaxiong Song ◽  
Thomas G. Denes
Keyword(s):  
Listeria Monocytogenes ◽  
Complete Genome ◽  
Foodborne Pathogen ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes

Bacteriophages isolated from environmental sources can be used as a biocontrol against the foodborne pathogen Listeria monocytogenes. Here, we present the complete genomes of LP-039 and LP-066, two Pecentumvirus bacteriophages that infect L. monocytogenes. The genome sizes of LP-039 and LP-066 are 136.2 kb and 139.0 kb, respectively.

scholarly journals Complete Genome Sequences of 47 Environmental Isolates of Escherichia coli

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Georgia Breckell ◽  
Olin K. Silander
Keyword(s):  
Escherichia Coli ◽  
Complete Genome ◽  
Environmental Isolates ◽  
Genome Sequences ◽  
Content Type ◽  
Genetic Elements ◽  
Complete Genomes

ABSTRACT Escherichia coli is commonly considered a host-associated bacterium. However, there is evidence that some strains occupy environmental (non-host-associated) niches. Here, we report the complete genomes of 47 Escherichia coli environmental isolates. These will be useful for understanding the dynamics of plasmids, phages, and other repetitive genetic elements.

scholarly journals Complete Genome Sequences of 18 Paenibacillus larvae Phages from the Western United States

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Bryan D. Merrill ◽  
Christopher P. Fajardo ◽  
Jared A. Hilton ◽  
Ashley M. Payne ◽  
Andy T. Ward ◽  
...  
Keyword(s):  
United States ◽  
Causative Agent ◽  
Complete Genome ◽  
Western United States ◽  
Paenibacillus Larvae ◽  
American Foulbrood ◽  
Genome Sequences ◽  
Content Type ◽  
Brigham Young University ◽  
Complete Genomes

We present here the complete genomes of 18 phages that infect Paenibacillus larvae, the causative agent of American foulbrood in honeybees. The phages were isolated between 2014 and 2016 as part of an undergraduate phage discovery course at Brigham Young University.

scholarly journals Complete Genome Sequences of Paenibacillus larvae Phages BN12, Dragolir, Kiel007, Leyra, Likha, Pagassa, PBL1c, and Tadhana

2018 ◽  
Vol 6 (24) ◽  
Author(s):  
Jamison K. Walker ◽  
Bryan D. Merrill ◽  
Jordan A. Berg ◽  
Aziza Dhalai ◽  
Douglas W. Dingman ◽  
...  
Keyword(s):  
Causative Agent ◽  
Complete Genome ◽  
Paenibacillus Larvae ◽  
American Foulbrood ◽  
Genome Sequences ◽  
Content Type ◽  
Complete Genomes ◽  
The Usa

ABSTRACT We present here the complete genomes of eight phages that infect Paenibacillus larvae, the causative agent of American foulbrood in honeybees. Phage PBL1c was originally isolated in 1984 from a P. larvae lysogen, while the remaining phages were isolated in 2014 from bee debris, honeycomb, and lysogens from three states in the USA.

scholarly journals Five Complete Genome Sequences Spanning the Dutch Streptococcus suis Serotype 2 and Serotype 9 Populations

2020 ◽  
Vol 9 (6) ◽  
Author(s):  
Boas C. L. van der Putten ◽  
Thomas J. Roodsant ◽  
Martin A. Haagmans ◽  
Constance Schultsz ◽  
Kees C. H. van der Ark
Keyword(s):  
Complete Genome ◽  
Streptococcus Suis ◽  
Genome Sequences ◽  
Content Type ◽  
Zoonotic Pathogen ◽  
Complete Genomes ◽  
Suis Serotype ◽  
Model Strain ◽  
Streptococcus Suis Serotype 2

The zoonotic pathogen Streptococcus suis can cause septicemia and meningitis in humans. We report five complete genomes of Streptococcus suis serotype 2 and serotype 9, covering the complete phylogeny of serotype 9 Dutch porcine isolates and zoonotic isolates. The isolates include the model strain S10 and the Dutch emerging zoonotic lineage.

scholarly journals Complete Genome Sequences of Six Salmonella enterica Strains (S. enterica subsp. arizonae , S. enterica subsp. diarizonae , and S. enterica subsp. salamae ) Isolated from Poultry Houses

2021 ◽  
Vol 10 (41) ◽  
Author(s):  
Alexandre Lamas ◽  
Patricia Regal ◽  
Alberto Cepeda ◽  
Carlos Manuel Franco
Keyword(s):  
Salmonella Enterica ◽  
Complete Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Poultry Houses ◽  
Complete Genomes ◽  
Cold Blood

Non- enterica subspecies of Salmonella enterica are associated with cold-blood animals. We report the complete genomes of six S. enterica strains (one S. enterica subsp. arizonae strain, four S. enterica subsp. salamae strains, and one S. enterica subsp. diarizonae strain) isolated from Spanish poultry houses. This will increase our knowledge of these non- enterica subspecies.

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