Coordination Chemistry of N-(2-Hydroxybenzyl)-(S)-amino Acids. Absolute Configuration of LAMBDA-mer-R,R-[Co(ohb-(S)-Ala)2]- Anion

1997 ◽  
Vol 62 (8) ◽  
pp. 1205-1213 ◽  
Author(s):  
Svetlana Pakhomova ◽  
Jan Ondráček ◽  
František Jursík
Keyword(s):  
Absolute Configuration ◽  
Diffraction Method ◽  
Cd Spectroscopy ◽  
X Ray Diffraction ◽  
Aromatic Rings ◽  
Molecular Mechanics Calculations ◽  
X Ray ◽  
Bond Network ◽  
Twist Boat ◽  
C Nmr

The crystal and molecular structure of the Ag[Co(ohb-(S)-Ala)2] . 5 H2O have been determined by X-ray diffraction method. The crystals are hexagonal with a = b = 9.039(0.002) Å, c = 24.896(0.006) Å, space group P3221, and Z = 3. Each Ag+ counterion coordinated by one water molecule which is a part of hydrogen bond network, is bonded to aromatic rings. The anion adopts LAMBDA-mer absolute configuration. Mer geometry is in accord with the molecular mechanics calculations. Since CD spectroscopy does not reflect configurational chirality, the absolute configuration has been determined by the X-ray structure analysis and assigned using chirality descriptors. The arrangements at the chiral centers are R for both N atoms. The two five-membered rings each assume envelope conformation with C1 and C2 atoms exceptionally deviated (0.378(7) and 1.210(7) Å) from the N-Co-O plane. Both six-membered rings have delta twist boat conformations. The complex described has been also characterized by the electronic and 13C NMR spectroscopies.

Alkaloids of Rauvolfia salicifolia GRISEB species

1982 ◽  
Vol 47 (11) ◽  
pp. 2912-2921 ◽  
Author(s):  
Patricia Sierra ◽  
Ladislav Novotný ◽  
Zdeněk Samek ◽  
Miloš Buděšínský ◽  
Ladislav Dolejš ◽  
...  
Keyword(s):  
Absolute Configuration ◽  
Cd Spectroscopy ◽  
X Ray Diffraction ◽  
X Ray ◽  
The Absolute

From the endemic Cuban species Rauvolfia salicifolia GRISEB nine alkaloids were isolated of which the following seven had been already described: (+)-ajmalidine (I), (-)-reserpiline (II), (-)-isoreserpiline (III), (-)-isocarapanaubine (IV), (-)-ajmalicine (V), (+)-vellosimine (VI), and (+)-yohimbine (VII). The structure of (-)-raucubaine (VIII) had been previously determined by X-ray diffraction and the structure of the alkaloid (-)-raucubainine (IX) was suggested on the basis of its conversion to (-)-raucubaine (VIII). The absolute configuration of (-)-raucubaine and (-)-raucubainine was elucidated by CD spectroscopy.

scholarly journals Enzyme-catalyzed kinetic resolution of N-Boc-trans-3-hydroxy-4-phenylpyrrolidine

2014 ◽  
Vol 12 (1) ◽  
pp. 25-32 ◽  
Author(s):  
Ferenc Faigl ◽  
Ervin Kovács ◽  
Dóra Balogh ◽  
Tamás Holczbauer ◽  
Mátyás Czugler ◽  
...  
Keyword(s):  
Single Crystal ◽  
Absolute Configuration ◽  
Kinetic Resolution ◽  
Diffraction Method ◽  
Pure Form ◽  
X Ray Diffraction ◽  
Resolution Method ◽  
X Ray ◽  
Temperature Optimization ◽  
Acetate Derivative

AbstractThe first enzyme-catalyzed kinetic resolution of tert-butyl-3-hydroxy-4-phenylpyrrolidine-1-carboxylate is presented. Enzyme, solvent and temperature optimization resulted in a new resolution method with E = 40 enantioselectivity. The acetate derivative of the (+)-(3S,4R) enantiomer formed while the (−)-(3R,4S) isomer remained intact. Very good enantioselectivities (E > 200) were achieved in the enzyme-catalyzed alcoholysis of the racemic acetate in i-propanol and t-butanol where the (+)-(3S,4R) enantiomer was prepared in pure form (ee > 99.7%). Absolute configuration of the (−)-(3R,4S)-enantiomer was determined by single crystal X-ray diffraction method.

scholarly journals Indole alkaloids from Vinca erecta type of sarpagine and ajmaline

2019 ◽  
Vol 10 (4) ◽  
pp. 409-416 ◽  
Author(s):  
Shahobiddin Adizov ◽  
Bakhodir Tashkhodjaev
Keyword(s):  
Conformational Changes ◽  
Absolute Configuration ◽  
Indole Alkaloids ◽  
Diffraction Method ◽  
Monoclinic Space Group ◽  
Crystal Data ◽  
X Ray Diffraction ◽  
Orthorhombic Space Group ◽  
Space Group ◽  
X Ray

The single crystal X-ray diffraction method established the absolute configuration of the Vinca erecta indole alkaloids of the akuammidine sarpagine type (3S, 5S, 15R, 16R) and its o-acyl derivative, as well as the type of ajmaline, quebrachidine (2S, 3S, 5S, 7R, 15S, 16R, 17S) and majoridine (2R, 3S, 5S, 7R, 15R, 16S, 17R). Crystal data for C21H24N2O3 (1): orthorhombic, space group P212121 (no. 19), a = 6.3949(5) Å, b = 13.5009(10) Å, c = 22.461(3) Å, Z = 4, 7694 reflections measured (7.64° ≤ 2Θ ≤ 152.294°), 3813 unique (Rint = 0.0798) which were used in all calculations. The final R1 was 0.0680 (I > 2σ(I)) and wR2 was 0.1650 (all data). Crystal data for C23H26N2O4 (2): orthorhombic, space group P212121 (no. 19), a = 9.9730(13) Å, b = 10.2090(10) Å, c = 20.409(3) Å, Z = 4, 7959 reflections measured (8.666° ≤ 2Θ ≤ 151.998°), 4212 unique (Rint = 0.0386) which were used in all calculations. The final R1 was 0.0477 (I > 2σ(I)) and wR2 was 0.1171 (all data). Crystal data for C42H48N4O6 (3): monoclinic, space group P21 (no. 4), a = 8.9320(10) Å, b = 21.515(5) Å, c = 9.5420(10) Å, β = 97.103(10)°, Z = 2, 16677 reflections measured (9.34° ≤ 2Θ ≤ 151.836°), 7393 unique (Rint = 0.0278) which were used in all calculations. The final R1 was 0.0366 (I > 2σ(I)) and wR2 was 0.1037 (all data). Crystal data for C23H28N2O3 (4): orthorhombic, space group P212121 (no. 19), a = 10.636(2) Å, b = 11.208(12) Å, c = 16.725(13) Å, Z = 4, 1650 reflections measured (9.498° ≤ 2Θ ≤ 119.97°), 1650 unique (Rint = 0.0436) which were used in all calculations. The final R1 was 0.0608 (I > 2σ(I)) and wR2 was 0.1720 (all data). In alkaloids such as sarpagine and ajmaline exo, the substituents of alkaloids do not lead to conformational changes of a stable polycyclic framework. In the series of sarpagine, alkaloids form mono-salts in the tetrahedral nitrogen N4, and in indolines of the ajmaline type, the tetrahedral hybridization of the N1 and N4 atoms favors the formation of disols. In V. erecta alkaloids, the exomethylene fragment (C18-C19=C20-C21) of the polycyclic backbone always takes on the E-state.

Structure of laserolide and isolaserolide: Revision of constitution and determination of relative and absolute configuration

1985 ◽  
Vol 50 (8) ◽  
pp. 1878-1887 ◽  
Author(s):  
Miroslav Holub ◽  
Miloš Buděšínský ◽  
Zdenka Smítalová ◽  
David Šaman ◽  
Urszula Rychłewska
Keyword(s):  
Diffraction Analysis ◽  
Absolute Configuration ◽  
Cd Spectroscopy ◽  
X Ray Diffraction ◽  
Physical Methods ◽  
X Ray

The position of the ester groups in sesquiterpenic lactones laserolide (I) and isolaserolide (II) has been revised and its relative and absolute configuration determined by chemical and physical methods (NMR and CD spectroscopy). The structure I was confirmed by X-ray diffraction analysis. Laserolide (I) is the first germacranolide found in the Umbelliferae family, isolaserolide (II) is the first representative of new stereostructural group of elemanolides - 5βH,6αH,7αH,10αCH3-elema-1,3-dien-6,12-olides.

(1S,7S)-7-Methyl-6,9-diazatricyclo[6,3,0,01,6]tridecane-5,10-dione, a tricyclic spirodilactam containing non-planar amide groups: Synthesis, NMR, crystal structure, absolute configuration, electronic and vibrational circular dichroism

1988 ◽  
Vol 53 (11) ◽  
pp. 2447-2472 ◽  
Author(s):  
Petr Maloň ◽  
C. L. Barness ◽  
Miloš Buděšínský ◽  
Rina K. Dukor ◽  
Dick Van der Helm ◽  
...  
Keyword(s):  
Crystal Structure ◽  
Circular Dichroism ◽  
Absolute Configuration ◽  
Optically Active ◽  
Vibrational Circular Dichroism ◽  
X Ray Diffraction ◽  
X Ray ◽  
Circular Dichroïsm ◽  
C Nmr ◽  
Active Precursor

The title spirocyclic dilactam (1S,7S)-7-methyl-6,9-diazatricyclo[6,3,0,01,6]tridecan-5,10-dione (I), a molecule designed to contain non-planar amide groups, has been synthesized from an optically active precursor of known absolute configuration. The relative and absolute configuration have been determined by X-ray diffraction. The conformation of the compound has been investigated by X-ray, 1H and 13C NMR, electronic and vibrational circular dichroism. The compound possesses moderately non-planar amide groups in the two rings of nonequal geometry. The electronic CD is dominated by inherent chirality of the amide chromophores. The dilactams I and II ((1S,6S)-6-methyl-5,8-diazatricyclo[6,3,0,01,5]undecan-4,9-dione – having five-membered rings) exhibit monosignate amide I VCD and strong VCD bands in the mid-ir region.

Sesquiterpenic lactones of the Inula caspica BLUME species

1990 ◽  
Vol 55 (6) ◽  
pp. 1568-1579 ◽  
Author(s):  
Sergazy M. Adekenov ◽  
Miloš Buděšínský ◽  
Metram A. Abdikalikov ◽  
Coblandy M. Turdybekov ◽  
David Šaman ◽  
...  
Keyword(s):  
Absolute Configuration ◽  
Cd Spectroscopy ◽  
X Ray Diffraction ◽  
Relative Configuration ◽  
X Ray

From Inula caspica BLUME (Compositae) were isolated 3β-hydroxy-2α-senecioyloxyisoalantolactone (I), whose structure was confirmed by X-ray diffraction and completed by determination of its absolute configuration, and britannin (II) whose relative configuration was determined by X-ray diffraction and absolute configuration by CD spectroscopy.

scholarly journals Immunosuppressive Isopimarane Diterpenes From Cultures of the Endophytic Fungus Ilyonectria robusta

2022 ◽  
Vol 12 ◽  
Author(s):  
Ke Ye ◽  
Xiao Lv ◽  
Xian Zhang ◽  
Pan-Pan Wei ◽  
Zheng-Hui Li ◽  
...  
Keyword(s):  
Cell Proliferation ◽  
B Lymphocytes ◽  
Absolute Configuration ◽  
Endophytic Fungus ◽  
Structure Elucidation ◽  
X Ray Diffraction ◽  
Relative Configuration ◽  
Bletilla Striata ◽  
X Ray ◽  
C Nmr

Five new isopimarane diterpenes, robustaditerpene A-E (1–5), which include 19-nor-isopimarane skeleton and isopimarane skeleton, were isolated from the liquid fermentation of the endophytic fungus Ilyonectria robusta collected from Bletilla striata. The structure elucidation and relative configuration assignments of all compounds were accomplished by interpretation of NMR and HRESIMS spectrometric analyses and 13C NMR calculation. And the absolute configuration of 1-5 were identified by single-crystal X-ray diffraction and ECD calculation. Compound 3 inhibited lipopolysaccharide-induced B lymphocytes cell proliferation with an IC50 value at 17.42 ± 1.57 μM while compound 5 inhibited concanavalin A-induced T lymphocytes cell proliferation with an IC50 value at 75.22 ± 6.10 μM. These data suggested that compounds 3 and 5 may possess potential immunosuppressive prospect.

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