Karyotypic characterization of some Liolaemus lizards in Chile (Iguanidae)

Genome ◽  
1989 ◽  
Vol 32 (3) ◽  
pp. 393-403 ◽  
Author(s):  
Madeleine Lamborot ◽  
E. Alvarez-Sarret
Keyword(s):  
Population Genetics ◽  
Pericentric Inversion ◽  
Diploid Number ◽  
Cytological Study ◽  
Interspecific Variation ◽  
Species Level ◽  
Chromosomal Variation ◽  
The Family ◽  
Karyotypic Variation

A comparative cytological study of 10 taxa of Liolaemus from different localities in Chile shows that several of them display a conservative karyotype, with six pairs of macrochromosomes similar in size and shape to other species within Liolaemus that are believed to be primitive in the family. These karyotypes may exhibit interspecific variation in the number and shape of the microchromosome pairs 7, 8, and 9 and in the chiasmata characteristics, thus permitting chromosomal characterization at the species level. Other taxa show an increased diploid number of chromosomes, mainly explained by Robertsonian derivation, pericentric inversion, translocation, and triploidy. One species presents intraspecific chromosomal variation. Thus, chromosomes can serve as genetic markers and improve our understanding of the evolution, systematics, and population genetics of these iguanids.Key words: Liolaemus (Iguanidae), karyotypic variation, chiasmata, triploidy.

KARYOTYPIC ANALYSES OF TWENTY-ONE SPECIES OF MOLOSSID BATS (MOLOSSIDAE: CHIROPTERA)

1974 ◽  
Vol 16 (1) ◽  
pp. 165-176 ◽  
Author(s):  
Jerry W. Warner ◽  
James L. Patton ◽  
Alfred L. Gardner ◽  
Robert J. Baker
Keyword(s):  
Geographic Variation ◽  
Diploid Number ◽  
Chromosomal Variation ◽  
Robertsonian Translocations ◽  
The Family

Examination of 135 specimens representing 21 species from seven genera of the family Molossidae revealed diploid numbers ranging from 34 to 48. Seventeen species from six genera have diploid numbers of 48. Geographic variation and polymorphism were found only in Eumops glaucinus. Chromosomal variation within the family is presumed to be primarily due to changes in diploid number resulting from Robertsonian translocations.

Prothrombin Metz : Purification and Characterization of a Variant of Human Prothrombin

1979 ◽  
Author(s):  
M Ribieto ◽  
J Elion ◽  
D Labie ◽  
F Josso
Keyword(s):  
Molecular Weight ◽  
Gel Electrophoresis ◽  
Polyacrylamide Gel Electrophoresis ◽  
Factor Xa ◽  
Polyacrylamide Gel ◽  
Cleavage Pattern ◽  
Purification And Characterization ◽  
Double Immunodiffusion ◽  
The Family

For the purification of the abnormal prothrombin (Pt Metz), advantage has been taken of the existence in the family of three siblings who, being double heterozygotes for Pt Metz and a hypoprothrombinemia, have no normal Pt. Purification procedures included barium citrate adsorption and chromatography on DEAE Sephadex as for normal Pt. As opposed to some other variants (Pt Barcelona and Madrid), Pt Metz elutes as a single symetrical peak. By SDS polyacrylamide gel electrophoresis, this material is homogeneous and appears to have the same molecular weight as normal Pt. Comigration of normal and abnormal Pt in the absence of SDS, shows a double band suggesting an abnormal charge for the variant. Pt Metz exhibits an identity reaction with the control by double immunodiffusion. Upon activation by factor Xa, Pt Metz can generate amydolytic activity on Bz-Phe-Val-Arg-pNa (S2160), but only a very low clotting activity. Clear abnormalities are observed in the cleavage pattern of Pt Metz when monitored by SDS gel electrophoresis. The main feature are the accumulation of prethrombin l (Pl) and the appearance of abnormal intermediates migrating faster than Pl.

scholarly journals Chromosomal Instability at Fragile Sites in Blue Foxes, Silver Foxes, and Their Interspecific Hybrids

Animals ◽  
2021 ◽  
Vol 11 (6) ◽  
pp. 1743
Author(s):  
Marta Kuchta-Gładysz ◽  
Ewa Wójcik ◽  
Anna Grzesiakowska ◽  
Katarzyna Rymuza ◽  
Olga Szeleszczuk
Keyword(s):  
Interspecific Hybrids ◽  
Genome Stability ◽  
Diploid Number ◽  
Fragile Sites ◽  
B Chromosomes ◽  
Silver Fox ◽  
Chromosomal Breaks ◽  
Blue Fox ◽  
Chromosomal Fragile Sites ◽  
Karyotypic Variation

A cytogenetic assay based on fragile sites (FS) enables the identification of breaks, chromatid gaps, and deletions. In healthy individuals, the number of these instabilities remains low. Genome stability in these species is affected by Robertsonian translocations in the karyotype of the blue fox and by B chromosomes in the silver fox. The aims of the study were to characterise the karyotype of blue foxes, silver foxes, and their hybrids and to identify chromosomal fragile sites used to evaluate genome stability. The diploid number of A chromosomes in blue foxes ranged from 48 to 50, while the number of B chromosomes in silver foxes varied from one to four, with a constant number of A chromosomes (2n = 34). In interspecific hybrids, both types of karyotypic variation were identified, with the diploid number of A chromosomes ranging from 40 to 44 and the number of B chromosomes varying from 0 to 3. The mean frequency of FS in foxes was 4.06 ± 0.19: 4.61 ± 0.37 in blue foxes, 3.46 ± 0.28 in silver foxes, and 4.12 ± 0.22 in hybrids. A relationship was identified between an increased number of A chromosomes in the karyotype of the hybrids and the frequency of chromosomal breaks. The FS assay was used as a biomarker for the evaluation of genomic stability in the animals in the study.

Genetic characterization of novel polymorphic microsatellite markers for Epilobium nankotaizanense (Onagraceae), an endemic and threatened herb in Taiwan

2021 ◽  
pp. 1-4
Author(s):  
Yu-Wei Tseng ◽  
Chi-Chun Huang ◽  
Chih-Chiang Wang ◽  
Chiuan-Yu Li ◽  
Kuo-Hsiang Hung
Keyword(s):  
Microsatellite Markers ◽  
Natural Populations ◽  
Conservation Strategy ◽  
Sequencing Data ◽  
Germplasm Collections ◽  
The Family ◽  
Conservation Genetic ◽  
Population Sizes ◽  
Polymorphic Microsatellite

Abstract Epilobium belongs to the family Onagraceae, which consists of approximately 200 species distributed worldwide, and some species have been used as medicinal plants. Epilobium nankotaizanense is an endemic and endangered herb that grows in the high mountains in Taiwan at an elevation of more than 3300 m. Alpine herbs are severely threatened by climate change, which leads to a reduction in their habitats and population sizes. However, only a few studies have addressed genetic diversity and population genetics. In the present study, we developed a new set of microsatellite markers for E. nankotaizanense using high-throughput genome sequencing data. Twenty polymorphic microsatellite markers were developed and tested on 30 individuals collected from three natural populations. These loci were successfully amplified, and polymorphisms were observed in E. nankotaizanense. The number of alleles per locus (A) ranged from 2.000 to 3.000, and the observed (Ho) and expected (He) heterozygosities ranged from 0.000 to 0.929 and from 0.034 to 0.631, respectively. The developed polymorphic microsatellite markers will be useful in future conservation genetic studies of E. nankotaizanense as well as for developing an effective conservation strategy for this species and facilitating germplasm collections and sustainable utilization of other Epilobium species.

scholarly journals CSMD: a computational subtraction-based microbiome discovery pipeline for species-level characterization of clinical metagenomic samples

2019 ◽  
Author(s):  
Yu Liu ◽  
Paul W Bible ◽  
Bin Zou ◽  
Qiaoxing Liang ◽  
Cong Dong ◽  
...  
Keyword(s):  
Species Level ◽  
Supplementary Information ◽  
Clinical Samples ◽  
Plasma Dna ◽  
Bioinformatics Pipeline ◽  
Microbial Identification ◽  
Reference Databases ◽  
Microbial Dna ◽  
Higher Sensitivity

Abstract Motivation Microbiome analyses of clinical samples with low microbial biomass are challenging because of the very small quantities of microbial DNA relative to the human host, ubiquitous contaminating DNA in sequencing experiments and the large and rapidly growing microbial reference databases. Results We present computational subtraction-based microbiome discovery (CSMD), a bioinformatics pipeline specifically developed to generate accurate species-level microbiome profiles for clinical samples with low microbial loads. CSMD applies strategies for the maximal elimination of host sequences with minimal loss of microbial signal and effectively detects microorganisms present in the sample with minimal false positives using a stepwise convergent solution. CSMD was benchmarked in a comparative evaluation with other classic tools on previously published well-characterized datasets. It showed higher sensitivity and specificity in host sequence removal and higher specificity in microbial identification, which led to more accurate abundance estimation. All these features are integrated into a free and easy-to-use tool. Additionally, CSMD applied to cell-free plasma DNA showed that microbial diversity within these samples is substantially broader than previously believed. Availability and implementation CSMD is freely available at https://github.com/liuyu8721/csmd. Supplementary information Supplementary data are available at Bioinformatics online.

scholarly journals Color-Metallographic Characterization of Alloyed White Cast Irons Ni-Hard Type

Metals ◽  
2020 ◽  
Vol 10 (6) ◽  
pp. 728
Author(s):  
Milagrosa González Fernández de Castro ◽  
Yolanda Martín Álvarez ◽  
Juan José Moreno-Labella ◽  
Miguel Panizo-Laiz ◽  
Benito del Río
Keyword(s):  
Impact Resistance ◽  
Solidification Structure ◽  
Hard Alloys ◽  
Metallic Materials ◽  
Low Carbon ◽  
Cast Irons ◽  
The Family ◽  
Color Metallography ◽  
Hard Type

The Ni-hard alloys white-cast irons are generally used for high wear work. Among them, those with better impact resistance because of its low carbon content compared to the rest of the family, are studied in this paper. One experimental technique of characterizing the metallic materials is the microstructural study. Several metallographic attacks intended to reveal qualitatively each microconstituent that forms the alloy, as well as the segregation and solidification structure of casting, are studied in this article. The use of color metallography is fundamental in this case to distinguish clearly the microconstituents. The main objective of this paper is to propose a series of attacks that identify each one of the microconstituents present in the alloy that has not been reported up to date.

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