Gene action in the human haptoglobins. IV. Amino acid sequence studies on the haptoglobin α chains

1970 ◽  
Vol 48 (1) ◽  
pp. 133-146 ◽  
Author(s):  
J. A. Black ◽  
G. H. Dixon

Alpha chains of human haptoglobin have been prepared from whole haptoglobin of genetic type Hp 2–1 purified from the ascites fluid of a single patient. Amino acid sequence analysis has been carried out on these light chains which represent the products α1S and α2(F,S) of the single genes Hp1S and Hp2(F,S), and are, respectively, 83 and 142 residues in length. The data reported here concern the sequence analysis of two series of tryptic peptides, one obtained by unlimited cleavage of the chains by p-toluene sulfonamido-phenylethyl chloromethyl ketone - trypsin, and the second following limitation of trypsin cleavage to arginyl residues after modification of lysyl residues by trifluoracetylation. The major technique for sequence analysis of these peptides was a modification of the p-dimethylaminonaphthalene-sulfonyl-Edman (dansyl-Edman) procedure employing a new thin-layer chromatographic separation of the dansyl-amino acids. The sequences of these tryptic peptides in conjunction with those of the chymotryptic peptides allowed the unequivocal deduction of portions of the sequence, but the final overlaps were provided by fragments obtained by specific chemical cleavage of the chain at aspartyl residues. The amino acid sequences deduced have documented the occurrence of a partial gene duplication in the gene product α2(F,S) of the Hp2(F,S) gene.




1980 ◽  
Vol 187 (3) ◽  
pp. 863-874 ◽  
Author(s):  
D M Johnson ◽  
J Gagnon ◽  
K B Reid

The serine esterase factor D of the complement system was purified from outdated human plasma with a yield of 20% of the initial haemolytic activity found in serum. This represented an approx. 60 000-fold purification. The final product was homogeneous as judged by sodium dodecyl sulphate/polyacrylamide-gel electrophoresis (with an apparent mol.wt. of 24 000), its migration as a single component in a variety of fractionation procedures based on size and charge, and its N-terminal amino-acid-sequence analysis. The N-terminal amino acid sequence of the first 36 residues of the intact molecule was found to be homologous with the N-terminal amino acid sequences of the catalytic chains of other serine esterases. Factor D showed an especially strong homology (greater than 60% identity) with rat ‘group-specific protease’ [Woodbury, Katunuma, Kobayashi, Titani, & Neurath (1978) Biochemistry 17, 811-819] over the first 16 amino acid residues. This similarity is of interest since it is considered that both enzymes may be synthesized in their active, rather than zymogen, forms. The three major CNBr fragments of factor D, which had apparent mol.wts. of 15 800, 6600 and 1700, were purified and then aligned by N-terminal amino acid sequence analysis and amino acid analysis. By using factor D labelled with di-[1,3-14C]isopropylphosphofluoridate it was shown that the CNBr fragment of apparent mol.wt. 6600, which is located in the C-terminal region of factor D, contained the active serine residue. The amino acid sequence around this residue was determined.



1963 ◽  
Vol 18 (12) ◽  
pp. 1032-1049 ◽  
Author(s):  
B. Wittmann-Liebold ◽  
H. G. Wittmann

The amino acid sequence of dahlemense, a naturally occuring strain of tobacco mosaic virus, has been determined and compared with that of the strain vulgare (Fig. 7). In this communication the experimental details are given for the elucidation of the amino acid sequences within two tryptic peptides with 65 amino acids.



1984 ◽  
Vol 37 (4) ◽  
pp. 191 ◽  
Author(s):  
WK Fisher ◽  
AT Gilbert ◽  
EOP Thompson

The tryptic peptides of the S-carboxymethylated globin chain ofa dimeric haemoglobin from A. trapezia were purified by high-performance liquid chromatography and their amino acid sequences determined by the dansyl-Edman method.



1969 ◽  
Vol 24 (7) ◽  
pp. 877-885 ◽  
Author(s):  
H. G. Wittmann ◽  
I. Hindennach ◽  
B. Wittmann-Liebold

Experimental data for determining a) the amino acid sequences of eight tryptic peptides containing 95 amino acids and b) the order of the tryptic peptides are given. Combining the data of this and of a previous paper the complete amino acid sequence of the coat protein of the TMV strain Holmes rib grass (HRG) is established (Fig. 5). It is compared with three other TMV strains the sequences of which have been determined before (Fig. 6).Differences and similarities between the sequences of the four TMV strains are discussed. HRG has a deletion of two amino acids and it is the most distantly related of the four TMV strains. When the sequence of HRG is compared to that of any of the other strains it turns out that in each case more than 50% of the 156 positions contain different amino acids (Fig. 7).The number of positions with the same amino acid in all strains and mutants so far studied is 30 per cent. These positions are not randomly distributed but clustered mainly in two regions. This finding probably reflects the restriction of amino acid exchanges by the spatial structure of the viral rod.



1978 ◽  
Vol 173 (1) ◽  
pp. 73-83 ◽  
Author(s):  
A Carne ◽  
C H Moore

The amino acid sequences of the tryptic peptides of the thiol proteinase actinidin from Actinidia chinensis were determined by the manual dansyl–Edman procedure. There are 12 tryptic peptides, which give a polypeptide chain of 220 residues with a mol.wt. of 23500. An alignment of the tryptic peptides was made by using the X-ray-crystallographic data of Baker [(1977) J. Mol. Biol. 115, 263–277] determined at 0.28 nm resolution on crystalline actinidin. Detailed evidence for the amino acid sequences of the tryptic peptides has been deposited as Supplementary Publication SUP 50083 (14 pages) at the British Library Lending Division, Boston Spa, Wetherby, West Yorkshire LS23 7BQ, U.K., from whom copies can be obtained on the terms indicated in Biochem. J. (1978) 169, 5.



1968 ◽  
Vol 46 (8) ◽  
pp. 825-843 ◽  
Author(s):  
David B. Smith

Evidence for the amino acid sequence of some peptides formed by the action of trypsin on the β-polypeptide chain of horse hemoglobin is presented. By analogy with the amino acid sequence of the β-chain of human hemoglobin, these peptides cover positions 1 to 82 and 117 to 146 of the horse β-chain. Twenty-one differences between the human and horse β-chain sequence are found in these regions.



1983 ◽  
Vol 213 (1) ◽  
pp. 31-38 ◽  
Author(s):  
N Tamiya ◽  
N Maeda ◽  
H G Cogger

The main neurotoxic components, toxins Hydrophis ornatus a and Hydrophis lapemoides a, were isolated from the venoms of the sea snakes Hydrophis ornatus and Hydrophis lapemoides respectively. The amino acid sequence of toxin Hydrophis ornatus a was deduced to be identical with that of toxin Astrotia stokesii a [Maeda & Tamiya (1978) Biochem. J. 175, 507-517] on the basis of identity of the tryptic peptide ‘map’ and the amino acid composition of each peptide. The amino acid sequence of toxin Hydrophis lapemoides a was determined mainly on the basis of identity of the amino acid compositions, mobilities on paper electrophoresis and migration positions on paper chromatography of the tryptic peptides with those of other sea-snake toxins whose sequences are known. Both toxins Hydrophis ornatus a and Hydrophis lapemoides a consisted of 60 amino acid residues and there were six amino acid replacements between them. The taxonomy of sea snakes in the Hydrophis ornatus complex has long been confused, and the above snakes were originally assigned to taxa that proved to be inconsistent with the relationships indicated by the neurotoxin amino acid sequences obtained. A subsequent re-examination of the specimens revealed an error in the original identifications and demonstrated the value of the protein amino acid sequences in systematic and phylogenetic studies. The isolation procedure and results of amino acid analysis of the tryptic peptides have been deposited as Supplementary Publication SUP 50121 (8 pages) with the British Library Lending Division, Boston Spa, Wetherby, West Yorkshire LS23 7BQ, U.K., from whom copies may be obtained as indicated in Biochem. J. (1983) 209, 5.



1975 ◽  
Author(s):  
B. Hessel

During plasma digestion of fibrinogen a degradation product with molecular weight (MW) of about 50,000 appear very early in the digest. As revealed by sodium dodecyl sulphate (SDS) gel electrophoresis this product has its origin in the A chain. Upon further hydrolysis the 50,000 MW fragment is degraded to a 25,000 MW fragment. Both the 50,000 and 25,000 MW fragments have been isolated. After treatment with cyanogenbromide (CNBr) of the 50,000 MW fragment and separation of the peptides obtained, a fragment with MW of 30,000 and two fragments of smaller MW were isolated. As revealed by amino acid sequence analysis and peptide mapping the 30,000 MW fragment was identical to a hydrophilic sulfurcontaining peptide (Hi2-DSK), isolated after CNBr-treatment of the whole fibrinogen molecule. The amino acid sequence analysis of the fragments is in progress. Amino acid sequences analysis of the 25,000 MW fragment gave the following sequence: Ala-Len-Thr- Asp-Met-Pro- Gln-Met- Arg-Met-Glu-Leu-Glu-. From residue number 11 it appears to be identical to the Hi2-DSK fragment. However, the 25,000 MW fragment is shorter at the COOH-terminal end.



1983 ◽  
Vol 38 (7-8) ◽  
pp. 613-616 ◽  
Author(s):  
F. A. Bieber ◽  
H. Aschauer ◽  
S. M. Bektas ◽  
G. Braunitzer

The amino-acid sequences of all expressed hemoglobins of the pig embryo are given: Hemo­globin Gower I (ζ2/ε2), Hemoblobin Gower II (α2/ε2), Hemoglobin Heide I (ζ2/ϑ2) and Hemo­globin Heide II (α0/ϑ2). The ζ-, ε- and ϑ-chains were obtained with chromatography on CM-cellulose from isolated hemoglobin components. The primary structure was established by sequencing the tryptic peptides in the sequenator: they where isolated using HPLC. The ζ-chains from pig and human differ in 23, the ε-chains in 20 positions. The embryonic globin-gene which express the ϑ-chains, is a new one in mammals, of ε-type and up to now it could only be found in pigs: the amino-acid sequence differ in only 4 positions from the ε-chains. Because no γ-chains (fetal Hb) are expressed the sequences of all hemoglobins (5 hemoglobin chains forming 5 different hemo­globins) of ontogeny in pig are now described.



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